BLASTX nr result

ID: Rehmannia29_contig00026935 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00026935
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN00275.1| hypothetical protein CDL12_27228 [Handroanthus im...    86   2e-16
ref|XP_011095302.1| protein EARLY FLOWERING 3-like [Sesamum indi...    79   3e-14
gb|PIN16839.1| hypothetical protein CDL12_10493 [Handroanthus im...    62   5e-08

>gb|PIN00275.1| hypothetical protein CDL12_27228 [Handroanthus impetiginosus]
          Length = 671

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 69/176 (39%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
 Frame = -1

Query: 478 PGPAFVXXXXXXXXXXXXXPNPSMGNFLNSAYG-------IXXXXXXXXXXXXXXXXXXX 320
           PGP FV              NP+ GNFL   YG       +                   
Sbjct: 473 PGPGFVSPPFGDCAPPGS--NPTTGNFLTPVYGFPAPNPQVQFPSFPVPGPHSYFPPYGM 530

Query: 319 PVTNISAFSGSSVKQTITNDPTIPNQIPAGEINIGIE--NQNRASP-----YGVSEDTEV 161
           P+   +AFSGSSV+QT  N      QI AGE N+ I   + N+ASP     +  SED EV
Sbjct: 531 PIMTTAAFSGSSVEQT--NPLANLGQISAGEPNVTIPPGHNNQASPDASNNFHPSEDIEV 588

Query: 160 QASISSSPVERLQERKS---MEEINVLPLFPTSPPIDDGPNASAPELDRPTQVIKV 2
           QAS +SSP ER ++ ++   M+  NVLPLFPTS PID     ++P+ +RP QVIKV
Sbjct: 589 QASTASSPTERREDSRASNAMQGRNVLPLFPTSSPID--ATNTSPQPERPMQVIKV 642


>ref|XP_011095302.1| protein EARLY FLOWERING 3-like [Sesamum indicum]
          Length = 678

 Score = 79.3 bits (194), Expect = 3e-14
 Identities = 64/183 (34%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
 Frame = -1

Query: 478  PGPAFVXXXXXXXXXXXXXPNPSMGNFLNSAYGIXXXXXXXXXXXXXXXXXXXPV----- 314
            PGP FV              NP MGN +  AYG+                          
Sbjct: 471  PGPGFVGPACGGCGPPGS--NPMMGNIMGPAYGVPAPHPQYQWPPTFPLAGPHGYFPPYS 528

Query: 313  TNISAFSGSSVKQTITNDPTIPNQIPAGEINIGIE---------NQNRASPYG-----VS 176
              +   SGSSV Q   N P+I  Q   GE N+ ++         N N+ASP       VS
Sbjct: 529  MPMMTLSGSSVDQM--NIPSIRGQASTGEANVNVQLHKSYAMPSNNNQASPEALNNVHVS 586

Query: 175  EDTEVQASISSSPVERLQERKS---MEEINVLPLFPTSPPID--DGPNASAPELDRPTQV 11
            +D EVQAS  SSP++ L + ++   +E  N+LPLFPTSP ID    P    PE ++ TQV
Sbjct: 587  KDMEVQASTESSPIDVLHDGRASSIVEGRNILPLFPTSPAIDTNSSPQLPQPEPEQTTQV 646

Query: 10   IKV 2
            IKV
Sbjct: 647  IKV 649


>gb|PIN16839.1| hypothetical protein CDL12_10493 [Handroanthus impetiginosus]
          Length = 646

 Score = 61.6 bits (148), Expect = 5e-08
 Identities = 60/189 (31%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
 Frame = -1

Query: 478 PGPAFVXXXXXXXXXXXXXPNPSMGNFLNSAYGIXXXXXXXXXXXXXXXXXXXP-----V 314
           PGP F+              NP M NF++ AYG+                   P     +
Sbjct: 434 PGPGFIGQACGPPIP-----NPMMSNFVSPAYGVPAPPAQYHMSSFPPAGYFPPAYGIPI 488

Query: 313 TNISAFSGSSVKQTIT----------NDPTIPNQIPAGEIN----IGIENQNRAS----- 191
            N S+FSGSSV+Q             +  T+P+Q     ++    +G E   R +     
Sbjct: 489 MNPSSFSGSSVEQMTPPSMQGLFSHHSSSTMPSQRNRNVLDDSNTLGSEFPKRRNGTVPD 548

Query: 190 -PYGV-SEDTEVQASISSSPVERLQERKS---MEEINVLPLFPTSPPID-DGPNASAPEL 29
            P  + S+D E+QAS +SSP E     K+   +E  NVLPLFPT+P I   G     P L
Sbjct: 549 YPSTLPSQDKEIQASAASSPAEGQSSHKATNVVEGRNVLPLFPTAPAISPSGSCPQVPTL 608

Query: 28  DRPTQVIKV 2
           D P +VIKV
Sbjct: 609 DHPIRVIKV 617


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