BLASTX nr result
ID: Rehmannia29_contig00026901
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia29_contig00026901 (1107 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 393 e-129 gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro... 352 e-117 gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygro... 307 e-101 gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 285 1e-86 gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo... 290 2e-86 gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 285 4e-84 gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 274 4e-83 gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 268 7e-83 gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 281 7e-82 dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt... 278 8e-82 gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 276 5e-80 gb|PNX96445.1| copia LTR rider [Trifolium pratense] 276 9e-80 gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 264 2e-79 dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 267 4e-79 gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 273 5e-79 gb|KYP58493.1| Retrovirus-related Pol polyprotein from transposo... 251 7e-78 emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 268 3e-77 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 267 1e-76 emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 266 1e-76 dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 267 1e-76 >ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Erythranthe guttata] Length = 598 Score = 393 bits (1010), Expect = e-129 Identities = 193/296 (65%), Positives = 227/296 (76%) Frame = +2 Query: 218 TPFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLI 397 TP R +FS+Y ++ N V +A+ + GIG VCLKF SG LTLKNVRHVP L +NLI Sbjct: 28 TPRREVFSDYVQMKNCGVTLADGTMIVVNGIGTVCLKFVSGSVLTLKNVRHVPTLSHNLI 87 Query: 398 SCAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSD 577 SCA LEDDG G WG G M I+KG+ +FKA + N+YVC+AES S+N VQ+D Sbjct: 88 SCAVLEDDGFRGDWGDGCMNIMKGSRYLFKALRMGNMYVCSAESSA------SMNVVQND 141 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 ++LWHK LGHMS K L ILHKN FG DK+S + CDSC+LGKQ+ V FP P PN + Sbjct: 142 LSELWHKGLGHMSNKWLSILHKNQYFGNDKVSSVTLCDSCILGKQTHVLFPEYPSPNLSR 201 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 C++ILEY+HADVWGP S PT GGNRYFLSIIDD+SRKV+VFL+K KS+VF+KFK WK LI Sbjct: 202 CTEILEYIHADVWGPTSVPTYGGNRYFLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLI 261 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 ENQTGKRIKTLRTDNG+EFCN FDNLCA GIRRHK+V +TPQQNGVAERMNRTL Sbjct: 262 ENQTGKRIKTLRTDNGIEFCNLEFDNLCANSGIRRHKSVVHTPQQNGVAERMNRTL 317 >gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum] Length = 345 Score = 352 bits (904), Expect = e-117 Identities = 164/218 (75%), Positives = 185/218 (84%) Frame = +2 Query: 452 MKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDKTDLWHKRLGHMSAKGLE 631 MKILKG+LV+FKA++ NLYVCNA + VNS++SD T+LWH RLGHMS+KGLE Sbjct: 1 MKILKGSLVLFKADRLNNLYVCNANPICDKIC---VNSIKSDMTNLWHNRLGHMSSKGLE 57 Query: 632 ILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMCSDILEYLHADVWGPASE 811 LHK GCFG DKLSCMPFC+SCV GKQ RV FP +P P T+CS +LEY+HADVWGPASE Sbjct: 58 TLHKQGCFGNDKLSCMPFCESCVYGKQHRVSFPTAPNPKVTVCSTVLEYVHADVWGPASE 117 Query: 812 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIENQTGKRIKTLRTDNGLE 991 PTQGGNRYFLSIIDDFSRKVWVFL+KNKS+VF+ FKNWK L ENQTGK+IKTLRTDNGLE Sbjct: 118 PTQGGNRYFLSIIDDFSRKVWVFLLKNKSDVFDSFKNWKTLTENQTGKKIKTLRTDNGLE 177 Query: 992 FCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 FCN+LFD LC + GI+RHKT PYTPQQNGV ERMNRTL Sbjct: 178 FCNSLFDELCEQCGIKRHKTNPYTPQQNGVVERMNRTL 215 >gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygrometricum] Length = 207 Score = 307 bits (787), Expect = e-101 Identities = 143/206 (69%), Positives = 172/206 (83%) Frame = +2 Query: 395 ISCAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQS 574 ISCAALED+GLEGRWG G MKI+KG+LV+FKA K NLYVC+A S SVNSVQ+ Sbjct: 5 ISCAALEDEGLEGRWGNGCMKIIKGSLVLFKAVKLNNLYVCHANSVCSKA---SVNSVQN 61 Query: 575 DKTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQT 754 D TDLWH+ LGHMS++GLEILHK GCFG DKLSC+PFCDSC+ GKQ RV FP P Q+ Sbjct: 62 DVTDLWHRILGHMSSRGLEILHKQGCFGTDKLSCVPFCDSCIYGKQHRVNFPALPRSKQS 121 Query: 755 MCSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKML 934 + S+IL+Y+HADVW P+SEPTQGG+RYFL++IDD+SRK+ VFL+KNK +VF+KF+ WK L Sbjct: 122 VSSEILDYIHADVWRPSSEPTQGGSRYFLAVIDDYSRKLRVFLLKNKYDVFDKFRTWKTL 181 Query: 935 IENQTGKRIKTLRTDNGLEFCNNLFD 1012 IENQT ++IKTLRTDNGLEFCN+ FD Sbjct: 182 IENQTSRKIKTLRTDNGLEFCNSQFD 207 >gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 690 Score = 285 bits (729), Expect = 1e-86 Identities = 144/297 (48%), Positives = 191/297 (64%), Gaps = 2/297 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P+++LF+ + V +G VLM N+ Q KIAGIG + +K G TL NVR +PDL NLIS Sbjct: 299 PYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLIS 358 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 LE G + GV+K+ KG +V+ KA + +LY+ S +V+S SDK Sbjct: 359 LGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSA---AVSSSMSDK 415 Query: 581 --TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQT 754 T LWH RLGHMS KG+ +L K G G + + FC+ CV GKQ RV F + + Sbjct: 416 DATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTK- 474 Query: 755 MCSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKML 934 L+Y+H+D+WGP+ P+ GG RY ++IIDDFSRKVWV+ +++K+E F FK WK L Sbjct: 475 ---GTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTL 531 Query: 935 IENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 +E QTGK++K LRTDNGLEFC F+ CA GI RHKT+P PQQNGVAER+NRT+ Sbjct: 532 VETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQQNGVAERLNRTI 588 >gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] Length = 993 Score = 290 bits (743), Expect = 2e-86 Identities = 146/287 (50%), Positives = 192/287 (66%), Gaps = 2/287 (0%) Frame = +2 Query: 251 EVVNGS-VLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLISCAALEDDGL 427 +V+N S +L+ N K + GIG + +K G+ LK+VRHVPDL NLIS L+D G Sbjct: 251 DVLNVSDLLLGNNKACDVVGIGSIAVKMHDGHVRILKDVRHVPDLKRNLISLGTLDDSGY 310 Query: 428 EGRWGKGVMKILKGNLVIFKAEKKRNLYVCN-AESEHESYVHNSVNSVQSDKTDLWHKRL 604 R +G+++I KG LVI K K+ LYV A E++V N DKT LWH+RL Sbjct: 311 IFRSERGLLRISKGALVIMKGIKRNGLYVLQGATLVGETHVTAKQNL---DKTKLWHQRL 367 Query: 605 GHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMCSDILEYLH 784 GH+S +GL L K G FG D ++ + FC+SC++GK R+ F +S IL+Y+H Sbjct: 368 GHLSDRGLIELQKQGLFGNDSIAKIDFCESCIIGKSHRLSFKLSTH----RAEGILDYIH 423 Query: 785 ADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIENQTGKRIK 964 +D+WGPA T GGNRYFLS IDD+SRKVW+FL+K+K E F KF WK ++ENQ +++K Sbjct: 424 SDLWGPARVATHGGNRYFLSFIDDYSRKVWIFLLKSKDETFSKFLEWKSMVENQKNRKLK 483 Query: 965 TLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 LRTDNGLEFCN F+ C++ GI RHKTV +TPQQNG+AERMNRTL Sbjct: 484 VLRTDNGLEFCNESFNKFCSDSGIVRHKTVSHTPQQNGLAERMNRTL 530 >gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1032 Score = 285 bits (729), Expect = 4e-84 Identities = 144/297 (48%), Positives = 191/297 (64%), Gaps = 2/297 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P+++LF+ + V +G VLM N+ Q KIAGIG + +K G TL NVR +PDL NLIS Sbjct: 3 PYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLIS 62 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 LE G + GV+K+ KG +V+ KA + +LY+ S +V+S SDK Sbjct: 63 LGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSA---AVSSSMSDK 119 Query: 581 --TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQT 754 T LWH RLGHMS KG+ +L K G G + + FC+ CV GKQ RV F + + Sbjct: 120 DATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTK- 178 Query: 755 MCSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKML 934 L+Y+H+D+WGP+ P+ GG RY ++IIDDFSRKVWV+ +++K+E F FK WK L Sbjct: 179 ---GTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTL 235 Query: 935 IENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 +E QTGK++K LRTDNGLEFC F+ CA GI RHKT+P PQQNGVAER+NRT+ Sbjct: 236 VETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQQNGVAERLNRTI 292 >gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 609 Score = 274 bits (700), Expect = 4e-83 Identities = 140/295 (47%), Positives = 182/295 (61%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F Y++ G V M N+ K GIG + +K G TL VRHVPDL NLIS Sbjct: 226 PNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLIS 285 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 L G + GVM+I KG+ V+ + KK NLY+ + S + + D Sbjct: 286 VGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQGSTNLISESVSVADKHTPDL 345 Query: 581 TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMC 760 T LWH RLGHMS +G+ +L K G + + FC+ CV+GK R+KFP + Q Sbjct: 346 THLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCVVGKHHRIKFPKA----QHTT 401 Query: 761 SDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIE 940 L+Y+H+D WGP+ P+ GG RYFLSIIDD+S W+F+MK+K++ F+ FK WK+L+E Sbjct: 402 KSTLDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHKNQAFKYFKEWKILVE 461 Query: 941 NQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 NQTGKRIK LRTDNGLEFC+ F++ C + GI R TV TPQQNGVAERMNRTL Sbjct: 462 NQTGKRIKRLRTDNGLEFCSAEFNDYCKKEGIVRQYTVRNTPQQNGVAERMNRTL 516 >gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 448 Score = 268 bits (686), Expect = 7e-83 Identities = 136/295 (46%), Positives = 179/295 (60%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F Y+E + G V M N+ K GIG + L+ G TL VRHVPDL NLIS Sbjct: 65 PNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLIS 124 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 L+ G + GVM+I +G+ V+ + KK NLY+ + S + D Sbjct: 125 VGVLDSKGFKCNVKNGVMEIKRGSTVVMRGFKKGNLYMLQGSTSSISESVSVAEKNIPDL 184 Query: 581 TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMC 760 T LWH RLGHMS +G+ IL + G + + FC+ CV GKQ R+KFP + Q Sbjct: 185 TYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQHRIKFPKA----QHST 240 Query: 761 SDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIE 940 L+Y+H+D WGP+ P+ GG RYFLSIIDD+SR W+F+ K+K++ F+ FK WK+L+E Sbjct: 241 KSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHKNQAFKCFKEWKILME 300 Query: 941 NQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 Q KR+K LRTDNGLEFC+ F++ C GI R TV TPQQNGVAERMN+TL Sbjct: 301 KQISKRVKRLRTDNGLEFCSKEFNDFCKAEGIARQYTVRNTPQQNGVAERMNKTL 355 >gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum] Length = 1309 Score = 281 bits (720), Expect = 7e-82 Identities = 140/297 (47%), Positives = 192/297 (64%), Gaps = 2/297 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P ++ F N E +G VL+ N ++ K+ GIG V LK G T+ VR+VPDL NL+S Sbjct: 295 PIKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPDLRRNLLS 354 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQ--S 574 L+ G + G MK++KG+L + + + LY+ A S V S N+ + Sbjct: 355 IGMLDSKGFNVKIEGGTMKVIKGSLTVMRGSQDNGLYILEA-----STVTGSSNAAVGGA 409 Query: 575 DKTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQT 754 +K LWH RLGH+S KGL L K G+DK+ + FCD CVLGK SRV+F S T Sbjct: 410 NKARLWHLRLGHVSEKGLVELSKQNLLGRDKVDDLSFCDECVLGKCSRVRFKRS----ST 465 Query: 755 MCSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKML 934 IL+Y+H+D+WGP+ ++GG RY++S+IDD+SRK+WV +K+K E F+ FK+WKM+ Sbjct: 466 QSKGILDYVHSDLWGPSRVASRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMM 525 Query: 935 IENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 +E QTGK+IK LRTDNGLE+C+ F + C + GI RH TVP TPQQNG+AERMNRT+ Sbjct: 526 VETQTGKKIKKLRTDNGLEYCSTEFKDFCKQEGIVRHYTVPNTPQQNGLAERMNRTI 582 >dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum] Length = 1006 Score = 278 bits (712), Expect = 8e-82 Identities = 145/295 (49%), Positives = 189/295 (64%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P + F + G V + N K K+ G G + LK LKNVR++P+L NLIS Sbjct: 125 PRKEYFETLELKEGGVVRLGNNKACKVQGTGSIRLKMYDDRDFLLKNVRYIPELKRNLIS 184 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 + ++ G R +GVM+I G LVI K K LY+ + + + SV + +D Sbjct: 185 ISMFDNLGYCTRIERGVMRISHGALVIAKGSKMNGLYILKGSTVISNALVTSVEN--ADI 242 Query: 581 TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMC 760 T LWH RLGH+S +GL L K G G++KL+ + FCD+C LGKQ +VKF V + Sbjct: 243 TKLWHLRLGHVSERGLVELAKQGLLGQEKLNKLDFCDNCTLGKQHKVKFGVGVHKS---- 298 Query: 761 SDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIE 940 S EY+H+D+WGPAS PT GG YFLSIIDD+SR+VWV ++KNKS+VFEKFK W LIE Sbjct: 299 SRPFEYVHSDLWGPASVPTHGGGSYFLSIIDDYSRRVWVHIIKNKSDVFEKFKEWHTLIE 358 Query: 941 NQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 NQ G ++K LRTDNGLEF + F+ C + GI+RH+TV YTPQQNG+AERMNRTL Sbjct: 359 NQIGTKLKVLRTDNGLEFVSEQFNEFCRKKGIKRHRTVAYTPQQNGLAERMNRTL 413 >gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1335 Score = 276 bits (707), Expect = 5e-80 Identities = 134/297 (45%), Positives = 193/297 (64%), Gaps = 1/297 (0%) Frame = +2 Query: 218 TPFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLI 397 TP ++ F ++KE+ +G V M N+ S + GIG + ++ G + L +VR++P++ NLI Sbjct: 296 TPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDVRYMPNMTRNLI 355 Query: 398 SCAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSD 577 S LED G + G++KI+KG I K +K+ LY+ + +E E H+S D Sbjct: 356 SLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILDGVTE-EGESHSSAEV--KD 412 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 +T LWH RLGHMS KG+EIL K GC ++ + + FC+ CV GKQ RV F P Q + Sbjct: 413 ETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEFCEDCVYGKQHRVSFA----PAQHV 468 Query: 758 CSDILEYLHADVWGPASEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKML 934 + L Y+H+D+WG P GN +YF+S +DD+SRKVW++ ++ K E FEKF WK + Sbjct: 469 TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKM 528 Query: 935 IENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 +ENQ+ +++K LRTDNGLE+CN+ F+ C E GI RHKT YTPQQNG+AER+NRT+ Sbjct: 529 VENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTI 585 >gb|PNX96445.1| copia LTR rider [Trifolium pratense] Length = 1318 Score = 276 bits (705), Expect = 9e-80 Identities = 139/296 (46%), Positives = 183/296 (61%) Frame = +2 Query: 218 TPFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLI 397 TP ++LF + GSVL+ N K KIAG+G V K L VR+VPDL NL+ Sbjct: 293 TPNKDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLHDESIRLLTEVRYVPDLKRNLL 352 Query: 398 SCAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSD 577 S + G + K +++++KG+ + + KK+ LY AE S N V++ Sbjct: 353 SLGEFDKKGYVFQGEKSILRVMKGSKEVLRGVKKQGLYTLEAEVVSGST--NVVSTKPLS 410 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 KT++WH RLGH+S +GL L K G DK+ + FC+ CV GK RVKF + Sbjct: 411 KTEIWHMRLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKFN----KGKQR 466 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 L+Y+HAD+WGPA P+ G RYFLSI+DD+SRK+WVF+ K K E FE FK+WK L+ Sbjct: 467 THGSLDYIHADLWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLV 526 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 ENQTG+++K LRTDNGLEFCN FD CA GI RH+T TPQQNG+AER NRT+ Sbjct: 527 ENQTGRKVKRLRTDNGLEFCNEAFDIFCAASGIARHRTTAGTPQQNGLAERFNRTI 582 >gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 593 Score = 264 bits (674), Expect = 2e-79 Identities = 136/295 (46%), Positives = 180/295 (61%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F Y++ G V M N+ K IG + +K G TL VRHVPDL NLIS Sbjct: 278 PNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLIS 337 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK 580 L+ G + GVM+I KG+ ++ + KK NLY+ + S + + D Sbjct: 338 VGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQGSTNLISESISVADKHTLDL 397 Query: 581 TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMC 760 T LWH RLGHMS +G+ +L K + + FC+ CVLGK R KFP + Q Sbjct: 398 TRLWHMRLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRSKFPKA----QHTT 453 Query: 761 SDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIE 940 L+Y+H++ WGP+ P+ GG RYFLSIIDD+SR W+F+MK+K++ F+ FK WK+L+E Sbjct: 454 KSTLDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHKNQAFKYFKEWKILVE 513 Query: 941 NQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 NQTGKRIK LRTDN LEFC+ F++ C + GI R TV TPQQNGVA+RMNRTL Sbjct: 514 NQTGKRIKRLRTDNSLEFCSAEFNDYCKKEGIVRQYTVRNTPQQNGVAKRMNRTL 568 >dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] Length = 778 Score = 267 bits (683), Expect = 4e-79 Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 1/296 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F+ Y+ V G+VLM ++ ++AGIG V +K G TL +VRH+P+L +LIS Sbjct: 278 PNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLIS 337 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAE-KKRNLYVCNAESEHESYVHNSVNSVQSD 577 L+ G + G G++K+ KG+LV+ KA+ K NLY + + S + SD Sbjct: 338 FCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 397 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 T+LWH RLGHMS GL L K G + + FC+ C+ GK RVKF S + Sbjct: 398 ATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTE-- 455 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 IL+Y+H+D+WGPA + + GG RY ++I+DD+SRKVW + +K+K + F+ FK WK ++ Sbjct: 456 --GILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 513 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 E QT +++K LRTDNG+EFC+ +F + C GI RH T+P+TPQQNGVAERMNRT+ Sbjct: 514 ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQNGVAERMNRTI 569 >gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1278 Score = 273 bits (699), Expect = 5e-79 Identities = 140/295 (47%), Positives = 186/295 (63%), Gaps = 2/295 (0%) Frame = +2 Query: 227 RNLFSNYKEVVNGSVL-MANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLISC 403 R+ FS+YK V NG V+ M N+ +I GIG V +K G TLK+VRH+P + NLIS Sbjct: 306 RDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLISL 365 Query: 404 AALEDDGLEGRWGKGVMKILKGNLVIFKAE-KKRNLYVCNAESEHESYVHNSVNSVQSDK 580 + L+ +G + GV+K+ KG+LV + NLYV + H S +V + +K Sbjct: 366 STLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPNK 425 Query: 581 TDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMC 760 T+LWH RLGHMS G+ L K M FC+ CV GK RVKF S + Sbjct: 426 TNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTK--- 482 Query: 761 SDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIE 940 IL+Y+HAD+WGP+ +P+ GG RY L+IIDD+SRKVW + +K+K + F FK WK++IE Sbjct: 483 -GILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIE 541 Query: 941 NQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 QT K +K LRTDN EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT+ Sbjct: 542 RQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTI 596 >gb|KYP58493.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 313 Score = 251 bits (641), Expect = 7e-78 Identities = 131/293 (44%), Positives = 180/293 (61%) Frame = +2 Query: 227 RNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLISCA 406 R LF+++KE NGSV + + ++ + G G + +K G T + +VP L NLIS Sbjct: 13 RKLFNSFKEW-NGSVKLGDGEELGVKGSGAIQIKMYDGMVRTF-DAWYVPGLRKNLISIG 70 Query: 407 ALEDDGLEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDKTD 586 L+ G G + + KG L++ K + + +YV S + + D T Sbjct: 71 TLDKQGYSFLGNDGHITVSKGALIVMKGKLQHGIYVMLGNSFQGTVSISHSLEQHVDNTK 130 Query: 587 LWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMCSD 766 LWH RLGHMS +GL +L K G G + FC+SCV+GKQ R+KF + ++ Sbjct: 131 LWHCRLGHMSERGLAVLSKQGLLGGAVTGKLEFCESCVMGKQRRLKFSHGKHTS----TE 186 Query: 767 ILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIENQ 946 IL+Y H+D+WGP+ + G +RYF++ IDD+SRKVWV+ +K+K EVF FK WK ++E + Sbjct: 187 ILQYFHSDLWGPSPVQSHGRSRYFVTFIDDYSRKVWVYFLKSKDEVFGHFKEWKTMVEKR 246 Query: 947 TGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 TGK +KTLRTDNGLEFCN LFD C E GI RH TV +TPQQNGVAERMN+TL Sbjct: 247 TGKLVKTLRTDNGLEFCNALFDGYCKEAGIVRHLTVRHTPQQNGVAERMNQTL 299 >emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] Length = 1208 Score = 268 bits (685), Expect = 3e-77 Identities = 134/290 (46%), Positives = 188/290 (64%), Gaps = 3/290 (1%) Frame = +2 Query: 245 YKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLISCAALEDDG 424 +KE G VL+ N K KI G G V +K G L++VR++P+L NLIS L+ G Sbjct: 281 FKEADGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSG 340 Query: 425 LEGRWGKGVMKILKGNLVIFKAEKKRNLYVCNAESEHESYVHNSVNSVQSDK---TDLWH 595 + +++ +G+L + K K LY ++ V V++V + T LWH Sbjct: 341 YTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQT-----VTGKVSTVLKEDVGTTKLWH 395 Query: 596 KRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTMCSDILE 775 +RLGH+S +GL+ L K G G KL+ +PFC+ CV GK +RVKF + Q L+ Sbjct: 396 QRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQ----LD 451 Query: 776 YLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLIENQTGK 955 Y+H+D+WGP+ P+ GG RYFL++IDD+SRKVW++ +KNKSE F KFK WK+L+E QT + Sbjct: 452 YIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSR 511 Query: 956 RIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 ++K LRTDNGLEF +N F++LC + GI RH+TV YTPQQNG+AERMNRT+ Sbjct: 512 KVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTI 561 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 267 bits (683), Expect = 1e-76 Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 1/296 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F+ Y+ V G+VLM ++ ++AGIG V +K G TL +VRH+P+L +LIS Sbjct: 519 PNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLIS 578 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAE-KKRNLYVCNAESEHESYVHNSVNSVQSD 577 L+ G + G G++K+ KG+LV+ KA+ K NLY + + S + SD Sbjct: 579 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 638 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 T+LWH RLGHM+ GL L K G + + FC+ C+ GK RVKF S + Sbjct: 639 ATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTE-- 696 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 IL+Y+H+D+WGPA + + GG RY ++I+DD+SRKVW + +K+K + F+ FK WK ++ Sbjct: 697 --GILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 754 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 E QT +++K LRTDNG+EFC+ +F + C GI RH TVP+TPQQNGVAERMNRT+ Sbjct: 755 ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 810 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 266 bits (680), Expect = 1e-76 Identities = 133/296 (44%), Positives = 187/296 (63%), Gaps = 1/296 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F+ Y+ V G+VLM ++ ++AGIG V +K G TL +VRH+P+L +LIS Sbjct: 312 PNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLIS 371 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAE-KKRNLYVCNAESEHESYVHNSVNSVQSD 577 L+ G + G G++K+ KG+LV+ KA K NLY + + S + SD Sbjct: 372 LCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLSNSD 431 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 T+LWH RLGHMS GL L K G +S + FC+ C+ GK RVKF S + Sbjct: 432 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTE-- 489 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 IL+Y+H+D+WGPA + + GG RY ++I+DD+SRKVW + +K+K + F FK WK ++ Sbjct: 490 --GILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMV 547 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 E QT +++K LRTDNG+EFC+ +F + C GI RH TVP+TPQQNGVAERMNR + Sbjct: 548 ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRII 603 >dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 267 bits (683), Expect = 1e-76 Identities = 132/296 (44%), Positives = 189/296 (63%), Gaps = 1/296 (0%) Frame = +2 Query: 221 PFRNLFSNYKEVVNGSVLMANEKQSKIAGIGDVCLKFESGYALTLKNVRHVPDLCNNLIS 400 P R+ F+ Y+ V G+VLM ++ ++AGIG V +K G TL +VRH+P+L +LIS Sbjct: 312 PNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLIS 371 Query: 401 CAALEDDGLEGRWGKGVMKILKGNLVIFKAE-KKRNLYVCNAESEHESYVHNSVNSVQSD 577 L+ G + G G++K+ KG+LV+ KA+ K NLY + + S + SD Sbjct: 372 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSD 431 Query: 578 KTDLWHKRLGHMSAKGLEILHKNGCFGKDKLSCMPFCDSCVLGKQSRVKFPVSPFPNQTM 757 T+LWH RLGHM+ GL L K G + + FC+ C+ GK RVKF S + Sbjct: 432 ATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTE-- 489 Query: 758 CSDILEYLHADVWGPASEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSEVFEKFKNWKMLI 937 IL+Y+H+D+WGPA + + GG RY ++I+DD+SRKVW + +K+K + F+ FK WK ++ Sbjct: 490 --GILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMV 547 Query: 938 ENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTL 1105 E QT +++K LRTDNG+EFC+ +F + C GI RH TVP+TPQQNGVAERMNRT+ Sbjct: 548 ERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTI 603