BLASTX nr result

ID: Rehmannia29_contig00026827 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00026827
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090755.1| E3 ubiquitin-protein ligase PUB23 [Sesamum i...    71   1e-11
gb|PIM97729.1| Ubiquitin--protein ligase [Handroanthus impetigin...    70   3e-11
ref|XP_012847056.1| PREDICTED: uncharacterized protein LOC105967...    67   4e-10

>ref|XP_011090755.1| E3 ubiquitin-protein ligase PUB23 [Sesamum indicum]
          Length = 328

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 45/104 (43%), Positives = 48/104 (46%)
 Frame = -2

Query: 316 MKTDQPKLKTTPRSPLFSCGFFRQCTQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 137
           MKTDQPKLKTTPR+ LFSCGFFR+CTQT                                
Sbjct: 1   MKTDQPKLKTTPRTQLFSCGFFRKCTQT-VLSPTTSTPPPLPQAAPPPPPPPAQLPPPAQ 59

Query: 136 XXXXXXXXSNTSQSFTQWRFPLXXXXXXXXXXSQPKPEPDPKTD 5
                   SNTSQSFTQWRFPL          SQPK E   + D
Sbjct: 60  PESSSSSSSNTSQSFTQWRFPLSNSPISHHSYSQPKAEAVSEPD 103


>gb|PIM97729.1| Ubiquitin--protein ligase [Handroanthus impetiginosus]
          Length = 329

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 48/110 (43%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
 Frame = -2

Query: 316 MKTDQPKLKTTPRSPLFSCGFFRQCTQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 137
           MKT+QPKL TTPRS LFSCGFFRQCTQT                                
Sbjct: 1   MKTNQPKLNTTPRSSLFSCGFFRQCTQT-VLSPTTYTPPPLPQEPPPPPPPPPVQPLPPS 59

Query: 136 XXXXXXXXSNTSQSFTQWRFPL-XXXXXXXXXXSQPKP----EPDPKTDS 2
                   SN SQSFTQWRF L           SQP+P    EPDPKTD+
Sbjct: 60  QPESSSSSSNASQSFTQWRFSLSNSPISHHHSCSQPQPETISEPDPKTDA 109


>ref|XP_012847056.1| PREDICTED: uncharacterized protein LOC105967041 [Erythranthe
           guttata]
          Length = 393

 Score = 66.6 bits (161), Expect = 4e-10
 Identities = 49/128 (38%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
 Frame = -2

Query: 394 LPINCDKNQLRRSLCSPAAVILQIFTMKTDQPKLKTTP-RSPLFSCGFFRQCTQTXXXXX 218
           L ++    QLRR+L      I+   TM+T+QPKLK  P RSPLFSCGFFRQCTQT     
Sbjct: 29  LSLSLTHKQLRRNL------IVVFPTMRTNQPKLKANPVRSPLFSCGFFRQCTQT-VLSP 81

Query: 217 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTSQSFTQWRFPLXXXXXXXXXXS 38
                                              SNTSQSFTQWRFPL          S
Sbjct: 82  TSSTPPPLPHAPPTPTPLTSQLMPPPPAESSSSSSSNTSQSFTQWRFPLSNSPLSSHHHS 141

Query: 37  QPKPEPDP 14
              P+ +P
Sbjct: 142 YSLPKSEP 149


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