BLASTX nr result

ID: Rehmannia29_contig00026714 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00026714
         (475 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN05395.1| hypothetical protein CDL12_22062 [Handroanthus im...    82   2e-23
gb|PIN22862.1| hypothetical protein CDL12_04423 [Handroanthus im...    78   1e-22
ref|XP_011081010.1| F-box/kelch-repeat protein At3g06240-like [S...    84   6e-16
gb|PIN12112.1| hypothetical protein CDL12_15282 [Handroanthus im...    54   4e-12
gb|PIN12111.1| hypothetical protein CDL12_15281 [Handroanthus im...    72   1e-11
ref|XP_011081011.1| F-box protein At3g07870-like [Sesamum indicum]     52   3e-11

>gb|PIN05395.1| hypothetical protein CDL12_22062 [Handroanthus impetiginosus]
          Length = 413

 Score = 82.0 bits (201), Expect(2) = 2e-23
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = -1

Query: 235 QNFPQFNHPDPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPELDVAPGFVEDFQLKP 56
           + F     P+P+F  +HS+NATQ L+ QFGD FK S+LLRF +PELD+AP FV+ F LKP
Sbjct: 33  KTFLSMTSPNPHFIGVHSANATQILMLQFGDDFKHSDLLRFIDPELDIAPEFVKKFILKP 92

Query: 55  IFQMPKLVSDN 23
           +F +P++   N
Sbjct: 93  LFHIPQIRKRN 103



 Score = 55.1 bits (131), Expect(2) = 2e-23
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -2

Query: 330 MVESLTDFPSTILIEILARLPLKTLFASRCVCK 232
           MVE+LTD P  +L EIL RLPLKTLF SRCVCK
Sbjct: 1   MVEALTDLPPNVLTEILVRLPLKTLFVSRCVCK 33


>gb|PIN22862.1| hypothetical protein CDL12_04423 [Handroanthus impetiginosus]
          Length = 401

 Score = 78.2 bits (191), Expect(2) = 1e-22
 Identities = 36/71 (50%), Positives = 51/71 (71%)
 Frame = -1

Query: 235 QNFPQFNHPDPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPELDVAPGFVEDFQLKP 56
           +NF      +P+F  L ++NATQ L+ QFG+ FKPS+LLRF +PELD+AP FV+ F LKP
Sbjct: 33  KNFLGLTSLNPHFIGLDAANATQILMLQFGEDFKPSDLLRFIDPELDIAPEFVKKFILKP 92

Query: 55  IFQMPKLVSDN 23
           +F +P++   N
Sbjct: 93  LFHIPQIRKRN 103



 Score = 55.8 bits (133), Expect(2) = 1e-22
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = -2

Query: 330 MVESLTDFPSTILIEILARLPLKTLFASRCVCK 232
           MVE+LTD P  +L+EIL RLPLKTLF SRCVCK
Sbjct: 1   MVEALTDLPPNVLMEILVRLPLKTLFVSRCVCK 33


>ref|XP_011081010.1| F-box/kelch-repeat protein At3g06240-like [Sesamum indicum]
          Length = 411

 Score = 84.0 bits (206), Expect = 6e-16
 Identities = 38/81 (46%), Positives = 55/81 (67%)
 Frame = -1

Query: 277 KAPIEDPLRKQVRLQNFPQFNHPDPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPEL 98
           + P++     +   + F      D +F  LHS+NATQ L FQFGD F PS+L+ +A+PEL
Sbjct: 27  RLPLKTLFLSRCVCKTFLNLTSIDRHFITLHSANATQILAFQFGDDFTPSKLISWADPEL 86

Query: 97  DVAPGFVEDFQLKPIFQMPKL 35
           D+APGF+++F+LKPIF+ P L
Sbjct: 87  DIAPGFIQNFRLKPIFEAPSL 107



 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 345 RQSAKMVESLTDFPSTILIEILARLPLKTLFASRCVCK 232
           R+SAKMVESLTD P  IL+EIL RLPLKTLF SRCVCK
Sbjct: 4   RKSAKMVESLTDLPPNILMEILVRLPLKTLFLSRCVCK 41


>gb|PIN12112.1| hypothetical protein CDL12_15282 [Handroanthus impetiginosus]
          Length = 370

 Score = 54.3 bits (129), Expect(2) = 4e-12
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -1

Query: 235 QNFPQFNHP-DPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPELDVAPGFVEDFQLK 59
           + F Q   P D Y  ALHSSNATQ+LVFQFGD  K S LLR                 LK
Sbjct: 33  RTFLQLTSPLDSYSIALHSSNATQSLVFQFGDSSKLSRLLR-----------------LK 75

Query: 58  PIFQMPKLVSDNTS 17
           PIF++PK    N S
Sbjct: 76  PIFEIPKFQKSNIS 89



 Score = 44.3 bits (103), Expect(2) = 4e-12
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -2

Query: 330 MVESLTDFPSTILIEILARLPLKTLFASRCVCK 232
           M +SLTD P  IL+EIL RL +K L ++RCVC+
Sbjct: 1   MAQSLTDLPQDILVEILIRLSMKALCSTRCVCR 33


>gb|PIN12111.1| hypothetical protein CDL12_15281 [Handroanthus impetiginosus]
          Length = 399

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 31/71 (43%), Positives = 49/71 (69%)
 Frame = -1

Query: 235 QNFPQFNHPDPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPELDVAPGFVEDFQLKP 56
           ++F      +P+F    ++NATQ L+ QFG+ FKPS+L+R  +PELD+AP FV+ F L+P
Sbjct: 15  RDFLSMTSHNPHFIGSDAANATQILMLQFGEDFKPSDLIRLIDPELDIAPEFVKKFLLRP 74

Query: 55  IFQMPKLVSDN 23
           +F +P++   N
Sbjct: 75  LFHIPQIQKHN 85


>ref|XP_011081011.1| F-box protein At3g07870-like [Sesamum indicum]
          Length = 408

 Score = 52.4 bits (124), Expect(2) = 3e-11
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = -1

Query: 235 QNFPQFNHPDPYFTALHSSNATQTLVFQFGDVFKPSELLRFAEPELDVAPGFVEDFQLKP 56
           + F      +P    L SS+  Q L+ QFGD+ KP+ L+   + ELD + G  E   LKP
Sbjct: 33  KTFLNLTFSNPPVNFLRSSDTAQNLIIQFGDLHKPTTLIHLVDSELDTSFGSGERVFLKP 92

Query: 55  IFQMPK 38
           +FQ+PK
Sbjct: 93  MFQIPK 98



 Score = 43.1 bits (100), Expect(2) = 3e-11
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -2

Query: 330 MVESLTDFPSTILIEILARLPLKTLFASRCVCK 232
           M +SL + P  IL EI +RLP+KTLFA R VCK
Sbjct: 1   MAQSLPELPPDILSEIFSRLPIKTLFACRSVCK 33


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