BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00026636
         (451 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALT31538.1| mediator of RNA polymerase II transcription subun...   167   5e-49
ref|XP_011101344.1| probable mediator of RNA polymerase II trans...    88   4e-18
gb|PIN23159.1| hypothetical protein CDL12_04123 [Handroanthus im...    79   1e-14

>gb|ALT31538.1| mediator of RNA polymerase II transcription subunit 26-like
           protein, partial [Rehmannia glutinosa]
          Length = 250

 Score =  167 bits (422), Expect = 5e-49
 Identities = 82/87 (94%), Positives = 84/87 (96%), Gaps = 3/87 (3%)
 Frame = -2

Query: 450 NGDKKSPIEAHHDQSTHNGVKALTPPKEKLKHNQIESDKLGTSTKRPHDQSFQETQHAKK 271
           NGDKKSPIEAHHDQSTHNGVKALTPPKEKLKHNQIESDKLGTSTKRPHDQSFQETQHAKK
Sbjct: 164 NGDKKSPIEAHHDQSTHNGVKALTPPKEKLKHNQIESDKLGTSTKRPHDQSFQETQHAKK 223

Query: 270 QRTSEIMEF---PKIMKSSVVTNNGGS 199
           QRTSEIM+F   PKIMK+SVVTNNGGS
Sbjct: 224 QRTSEIMDFPNIPKIMKNSVVTNNGGS 250


>ref|XP_011101344.1| probable mediator of RNA polymerase II transcription subunit 26c
           [Sesamum indicum]
          Length = 289

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 8/97 (8%)
 Frame = -2

Query: 450 NGDKKSPIEAHHDQSTHNGVKA--------LTPPKEKLKHNQIESDKLGTSTKRPHDQSF 295
           NGD+KS  EAH D+S  NGV+A        LTP K KL+H+Q+ESDK G++ KR   Q++
Sbjct: 200 NGDEKSINEAH-DRSIRNGVEAQNTSVSCCLTPSKAKLEHSQMESDKSGSAKKRLPHQNY 258

Query: 294 QETQHAKKQRTSEIMEFPKIMKSSVVTNNGGSVPLKY 184
           +ETQH KKQRTS+++ F  I      TNNG SVP++Y
Sbjct: 259 EETQHGKKQRTSKMINFHNI------TNNGSSVPVRY 289


>gb|PIN23159.1| hypothetical protein CDL12_04123 [Handroanthus impetiginosus]
          Length = 290

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 13/101 (12%)
 Frame = -2

Query: 444 DKKSPIEAHH----DQSTHNGVKA-------LTPPKEKLKHNQIESDKLGTSTKRPHDQS 298
           DKKSP EAHH    D+  H+           LTP K K+KHNQIES+K   +TK  HDQ+
Sbjct: 190 DKKSPHEAHHENIQDEVIHHADAQNTSVSCYLTPVKGKMKHNQIESEKPVLATKCLHDQN 249

Query: 297 FQETQHAKKQRTSEIMEFPKI--MKSSVVTNNGGSVPLKYW 181
           + E Q AKK +T+++  F  I   K+++V NNGG   +K W
Sbjct: 250 YHEGQRAKKHKTAQVTNFHNIPKTKNAIVMNNGGGFTMKSW 290