BLASTX nr result
ID: Rehmannia29_contig00026573
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00026573
(643 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075556.1| ERAD-associated E3 ubiquitin-protein ligase ... 125 1e-29
ref|XP_020549084.1| ERAD-associated E3 ubiquitin-protein ligase ... 125 1e-29
gb|PIN07759.1| E3 ubiquitin ligase [Handroanthus impetiginosus] 115 4e-26
gb|KZV16184.1| RING/U-box superfamily protein [Dorcoceras hygrom... 107 2e-23
ref|XP_011070965.1| ERAD-associated E3 ubiquitin-protein ligase ... 106 4e-23
ref|XP_012847700.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 82 2e-14
ref|XP_012855349.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 65 1e-08
ref|XP_009605761.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 64 4e-08
ref|XP_016441093.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 64 4e-08
ref|XP_018627651.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 62 9e-08
gb|OMO71145.1| Zinc finger, RING-type [Corchorus capsularis] 62 9e-08
ref|XP_022752473.1| ERAD-associated E3 ubiquitin-protein ligase ... 60 3e-07
ref|XP_022752472.1| ERAD-associated E3 ubiquitin-protein ligase ... 60 4e-07
ref|XP_016733709.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 60 6e-07
gb|PPR80893.1| hypothetical protein GOBAR_AA39817 [Gossypium bar... 60 6e-07
ref|XP_021279048.1| ERAD-associated E3 ubiquitin-protein ligase ... 60 6e-07
gb|KJB21755.1| hypothetical protein B456_004G012200 [Gossypium r... 60 6e-07
ref|XP_012472889.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 60 8e-07
ref|XP_015080056.1| PREDICTED: ERAD-associated E3 ubiquitin-prot... 59 1e-06
dbj|GAV77851.1| zf-RING_2 domain-containing protein [Cephalotus ... 59 1e-06
>ref|XP_011075556.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B isoform X2
[Sesamum indicum]
Length = 531
Score = 125 bits (313), Expect = 1e-29
Identities = 67/100 (67%), Positives = 73/100 (73%)
Frame = -3
Query: 641 HPADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQL 462
HPA T M GG GA S LSQQY+FAN TF Q PQ + QFP +NGQF SASD QL
Sbjct: 418 HPASTSMANTGG-GAASGLSQQYEFANVTFAQLPQCAPLPSQFPCLNGQFDPESASDSQL 476
Query: 461 DLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTDIKGK 342
LQ K I++QIEFLQNQ QLLQT NGEK MDLGS+DIKGK
Sbjct: 477 GLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDLGSSDIKGK 516
>ref|XP_020549084.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B isoform X1
[Sesamum indicum]
Length = 539
Score = 125 bits (313), Expect = 1e-29
Identities = 67/100 (67%), Positives = 73/100 (73%)
Frame = -3
Query: 641 HPADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQL 462
HPA T M GG GA S LSQQY+FAN TF Q PQ + QFP +NGQF SASD QL
Sbjct: 426 HPASTSMANTGG-GAASGLSQQYEFANVTFAQLPQCAPLPSQFPCLNGQFDPESASDSQL 484
Query: 461 DLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTDIKGK 342
LQ K I++QIEFLQNQ QLLQT NGEK MDLGS+DIKGK
Sbjct: 485 GLQTKLIKNQIEFLQNQYQLLQTQNGEKTMDLGSSDIKGK 524
>gb|PIN07759.1| E3 ubiquitin ligase [Handroanthus impetiginosus]
Length = 538
Score = 115 bits (287), Expect = 4e-26
Identities = 60/99 (60%), Positives = 69/99 (69%)
Frame = -3
Query: 638 PADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQLD 459
PA+T DGG A SQQYQF NTTF QSPQ T V QFP NG F GS+SD LD
Sbjct: 425 PANTKTANDGGGEAAGGPSQQYQFPNTTFAQSPQWTSVPLQFPCANGHFEAGSSSDSHLD 484
Query: 458 LQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTDIKGK 342
LQ K I+ QIEFLQ Q++LLQTS+ EK D+GS+D+KGK
Sbjct: 485 LQRKLIKLQIEFLQKQLELLQTSSDEKTTDVGSSDVKGK 523
>gb|KZV16184.1| RING/U-box superfamily protein [Dorcoceras hygrometricum]
Length = 540
Score = 107 bits (268), Expect = 2e-23
Identities = 59/100 (59%), Positives = 72/100 (72%)
Frame = -3
Query: 641 HPADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQL 462
H ++TVM+ D +TS L+QQ QF NTTF +S Q TF SPQF NGQ G GSAS+ +
Sbjct: 420 HSSNTVMSNDASGASTSGLTQQNQFLNTTFARSQQCTF-SPQFLGFNGQVGAGSASEAPV 478
Query: 461 DLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTDIKGK 342
DLQMK I++QIEFLQ Q+Q LQ+SN EK M GS+D KGK
Sbjct: 479 DLQMKLIENQIEFLQQQLQHLQSSNVEKTMGQGSSDDKGK 518
>ref|XP_011070965.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Sesamum
indicum]
Length = 537
Score = 106 bits (265), Expect = 4e-23
Identities = 55/100 (55%), Positives = 70/100 (70%)
Frame = -3
Query: 641 HPADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQL 462
H + V+ DG +GA S LSQ++Q AN F Q PQ +FV PQF NG F G+AS+
Sbjct: 418 HCGNNVVASDGEDGAVSGLSQEHQLANMVFPQLPQGSFVPPQFQGFNGHFASGNASEH-- 475
Query: 461 DLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTDIKGK 342
DLQ+K I+HQIEFLQ Q++LLQTS+ K DLG++DIKGK
Sbjct: 476 DLQVKLIEHQIEFLQRQLELLQTSSSGKGKDLGTSDIKGK 515
>ref|XP_012847700.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Erythranthe guttata]
gb|EYU28822.1| hypothetical protein MIMGU_mgv1a005082mg [Erythranthe guttata]
Length = 497
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/85 (56%), Positives = 58/85 (68%)
Frame = -3
Query: 596 TSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQLDLQMKSIQHQIEFLQ 417
T L QQY ANT+F S Q T V PQFP ++G+ GS S QL L K I+HQIEF+Q
Sbjct: 405 TCGLPQQY--ANTSFAWSAQCTSVPPQFPCMHGELESGSNS--QLALHNKLIKHQIEFMQ 460
Query: 416 NQIQLLQTSNGEKPMDLGSTDIKGK 342
NQ+QLL+ S GEK +D S+DIKGK
Sbjct: 461 NQLQLLRKSKGEKTVDQVSSDIKGK 485
>ref|XP_012855349.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Erythranthe guttata]
ref|XP_012855350.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Erythranthe guttata]
gb|EYU22388.1| hypothetical protein MIMGU_mgv1a005035mg [Erythranthe guttata]
Length = 499
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -3
Query: 500 GQFGVGSASDFQLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGST-DIKGK 342
GQ + S+ Q DLQ+K IQHQIEFLQ Q+QLLQTSNGEK MD+ +T D KGK
Sbjct: 423 GQLRARNVSEPQQDLQVKLIQHQIEFLQRQLQLLQTSNGEKKMDVETTPDNKGK 476
>ref|XP_009605761.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
isoform X1 [Nicotiana tomentosiformis]
ref|XP_009605762.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
isoform X1 [Nicotiana tomentosiformis]
Length = 528
Score = 63.5 bits (153), Expect = 4e-08
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -3
Query: 608 GEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQLDLQMKSIQHQI 429
GE A++ S Q+Q AN F Q PQ F+ Q+P N S + QL+ +Q QI
Sbjct: 429 GERASNEQSPQHQLANMPFAQYPQCGFLPFQYPGANNL----SIPNAQLEAHKILLQQQI 484
Query: 428 EFLQNQIQLLQTSNGEKPMD-LGSTDIKGK 342
E LQNQ++LL+ N +KP D LG +D KGK
Sbjct: 485 EVLQNQLKLLENPNTQKPADALGISDSKGK 514
>ref|XP_016441093.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Nicotiana tabacum]
ref|XP_016441094.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Nicotiana tabacum]
Length = 531
Score = 63.5 bits (153), Expect = 4e-08
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -3
Query: 608 GEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQLDLQMKSIQHQI 429
GE A++ S Q+Q AN F Q PQ F+ Q+P N S + QL+ +Q QI
Sbjct: 430 GERASNEQSPQHQLANMPFAQYPQCGFLPFQYPGANNL----SIPNAQLEAHKILLQQQI 485
Query: 428 EFLQNQIQLLQTSNGEKPMD-LGSTDIKGK 342
E LQNQ++LL+ N +KP D LG +D KGK
Sbjct: 486 EVLQNQLKLLENPNTQKPADALGISDSKGK 515
>ref|XP_018627651.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
isoform X2 [Nicotiana tomentosiformis]
Length = 517
Score = 62.4 bits (150), Expect = 9e-08
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 602 GATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDFQLDLQMKSIQHQIEF 423
GA++ S Q+Q AN F Q PQ F+ Q+P N S + QL+ +Q QIE
Sbjct: 420 GASNEQSPQHQLANMPFAQYPQCGFLPFQYPGANNL----SIPNAQLEAHKILLQQQIEV 475
Query: 422 LQNQIQLLQTSNGEKPMD-LGSTDIKGK 342
LQNQ++LL+ N +KP D LG +D KGK
Sbjct: 476 LQNQLKLLENPNTQKPADALGISDSKGK 503
>gb|OMO71145.1| Zinc finger, RING-type [Corchorus capsularis]
Length = 547
Score = 62.4 bits (150), Expect = 9e-08
Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Frame = -3
Query: 635 ADTVMTKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-- 474
AD+ + GE T+ QQ+ AN +F+Q P FV Q P G G GSA
Sbjct: 422 ADSTKVESSGE-QTAIGQQQFAVPGGQANLSFSQFPPCVFVPFQLPGAIGNLGEGSAGTQ 480
Query: 473 ---DFQLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLG---STDIKGK 342
D QL+ Q K IQ QIE LQ+Q+QLLQ E+ MD G S+D KGK
Sbjct: 481 NIPDSQLEAQKKIIQQQIEALQHQLQLLQKPKTEESMDSGLTASSDRKGK 530
>ref|XP_022752473.1| ERAD-associated E3 ubiquitin-protein ligase HRD1A-like isoform X2
[Durio zibethinus]
Length = 360
Score = 60.5 bits (145), Expect = 3e-07
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Frame = -3
Query: 635 ADTVMTKDGGEGATSRLSQQYQ----FANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-- 474
ADT+ + GE + + QQ+ +AN +F Q P F+ Q P NG G GS+
Sbjct: 243 ADTMKVESSGESTS--IGQQFAIPGGYANLSFPQFPHCVFLPFQSPGANGNSGEGSSGNQ 300
Query: 473 ---DFQLDLQMKSIQHQIEFLQNQIQLLQ--TSNGEKPMDLG---STDIKGK 342
D +L++Q K IQ QIE LQ+Q+QLLQ E+ D+G S+D KGK
Sbjct: 301 STPDSELEVQKKIIQQQIEVLQHQLQLLQMRKPKTEENTDIGLTASSDRKGK 352
>ref|XP_022752472.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
[Durio zibethinus]
Length = 539
Score = 60.5 bits (145), Expect = 4e-07
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Frame = -3
Query: 635 ADTVMTKDGGEGATSRLSQQYQ----FANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-- 474
ADT+ + GE + + QQ+ +AN +F Q P F+ Q P NG G GS+
Sbjct: 422 ADTMKVESSGESTS--IGQQFAIPGGYANLSFPQFPHCVFLPFQSPGANGNSGEGSSGNQ 479
Query: 473 ---DFQLDLQMKSIQHQIEFLQNQIQLLQ--TSNGEKPMDLG---STDIKGK 342
D +L++Q K IQ QIE LQ+Q+QLLQ E+ D+G S+D KGK
Sbjct: 480 STPDSELEVQKKIIQQQIEVLQHQLQLLQMRKPKTEENTDIGLTASSDRKGK 531
>ref|XP_016733709.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Gossypium hirsutum]
Length = 508
Score = 60.1 bits (144), Expect = 6e-07
Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Frame = -3
Query: 620 TKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-----DF 468
TK G + +Q+ N +F + P TFV Q P VNG G S+S D
Sbjct: 393 TKGESSGEMTSTGEQFVIPGGQVNLSFPRFPHCTFVPFQLPRVNGNMGEASSSNLHIPDS 452
Query: 467 QLDLQMKSIQHQIEFLQNQIQLLQTS--NGEKPMDLG---STDIKGK 342
QL+ Q K IQ QIE LQNQ+QLLQ E+ D G S+D KGK
Sbjct: 453 QLEAQKKIIQQQIEVLQNQLQLLQMQKLKTEESADAGPTASSDRKGK 499
>gb|PPR80893.1| hypothetical protein GOBAR_AA39817 [Gossypium barbadense]
Length = 519
Score = 60.1 bits (144), Expect = 6e-07
Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Frame = -3
Query: 620 TKDGGEGATSRLSQQY-----QFANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-----D 471
TK G T+ +Q+ QF N +F + P FV Q P V G G S+S D
Sbjct: 404 TKGESSGETTSTGEQFVIPGGQF-NLSFPRFPHCAFVPSQLPRVTGNMGEASSSNLHIPD 462
Query: 470 FQLDLQMKSIQHQIEFLQNQIQLLQTS--NGEKPMDLG---STDIKGK 342
QL+ Q K IQ QIE LQNQ+QLLQ E+ +D G S+D KGK
Sbjct: 463 SQLEAQKKIIQQQIEVLQNQLQLLQMQKPKTEESVDTGPTASSDRKGK 510
>ref|XP_021279048.1| ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Herrania
umbratica]
Length = 547
Score = 60.1 bits (144), Expect = 6e-07
Identities = 46/110 (41%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Frame = -3
Query: 635 ADTVMTKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-- 474
AD+ + GE T QQ+ AN +F Q P FV Q P NG G G S
Sbjct: 422 ADSTKVESSGE-RTFIGQQQFAIPGGHANLSFPQFPHCVFVPFQLPGANGNSGEGLGSYQ 480
Query: 473 ---DFQLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLG---STDIKGK 342
D QL+ Q K IQ +IE LQ+Q QLLQ E+ MD+G S+D KGK
Sbjct: 481 NIPDSQLEAQKKIIQQKIEVLQHQRQLLQKPKTEESMDIGLTASSDRKGK 530
>gb|KJB21755.1| hypothetical protein B456_004G012200 [Gossypium raimondii]
Length = 361
Score = 59.7 bits (143), Expect = 6e-07
Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = -3
Query: 620 TKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-----DF 468
TK G T+ +Q+ N +F P FV Q P VNG G S+S D
Sbjct: 246 TKGESSGETTSTGEQFVIPGGQVNLSFPWFPHCAFVPFQLPRVNGNMGEASSSNLHIPDS 305
Query: 467 QLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTD 354
QL+ Q K IQ QIE LQNQ+QLLQ +KP GS D
Sbjct: 306 QLEAQKKIIQQQIEVLQNQLQLLQM---QKPKTEGSAD 340
>ref|XP_012472889.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
isoform X2 [Gossypium raimondii]
gb|KJB21753.1| hypothetical protein B456_004G012200 [Gossypium raimondii]
Length = 540
Score = 59.7 bits (143), Expect = 8e-07
Identities = 41/98 (41%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = -3
Query: 620 TKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSAS-----DF 468
TK G T+ +Q+ N +F P FV Q P VNG G S+S D
Sbjct: 425 TKGESSGETTSTGEQFVIPGGQVNLSFPWFPHCAFVPFQLPRVNGNMGEASSSNLHIPDS 484
Query: 467 QLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGSTD 354
QL+ Q K IQ QIE LQNQ+QLLQ +KP GS D
Sbjct: 485 QLEAQKKIIQQQIEVLQNQLQLLQM---QKPKTEGSAD 519
>ref|XP_015080056.1| PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
[Solanum pennellii]
Length = 536
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Frame = -3
Query: 638 PADTVMTKDGGEGATSRLSQQYQFANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDF--- 468
P +V E A + SQQ+Q+AN F PQS+F +P N G GS S+F
Sbjct: 415 PVSSVSVDSQRESAANEWSQQHQYANMPFAYYPQSSFGPLGYPGANMPVGDGSRSNFSTS 474
Query: 467 --QLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLGS-TDIKGK 342
QL+ +Q Q + LQNQ++LLQ+S +K D ++ KGK
Sbjct: 475 DTQLEAHRIFLQQQCKALQNQLKLLQSSKTQKAADGAKVSESKGK 519
>dbj|GAV77851.1| zf-RING_2 domain-containing protein [Cephalotus follicularis]
Length = 554
Score = 59.3 bits (142), Expect = 1e-06
Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Frame = -3
Query: 635 ADTVMTKDGGEGATSRLSQQYQF----ANTTFTQSPQSTFVSPQFPLVNGQFGVGSASDF 468
AD+ + + GGE A+ R QQ F AN +F Q P FV VN +G S S+
Sbjct: 423 ADSTL-ESGGEQASIRQPQQSAFTGGPANISFPQFPHPVFVPFHSCDVNVNYGERSGSNH 481
Query: 467 -----QLDLQMKSIQHQIEFLQNQIQLLQTSNGEKPMDLG---STDIKGK 342
QL+ Q K +Q QIE LQNQ+QLLQ E+ + +G S+D KGK
Sbjct: 482 NIPPSQLEAQKKFLQQQIEVLQNQLQLLQKPKAEESVGMGLSVSSDNKGK 531