BLASTX nr result

ID: Rehmannia29_contig00026394 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00026394
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008790114.1| PREDICTED: zinc finger CCCH domain-containin...    57   1e-06
ref|XP_010108285.1| zinc finger CCCH domain-containing protein 2...    55   6e-06

>ref|XP_008790114.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Phoenix
           dactylifera]
          Length = 506

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 120 TTLVQMCKFFLQQRCRFGSNCRLSHGM 200
           T  +QMCKFFLQQRCRFGSNCRLSHGM
Sbjct: 147 TESMQMCKFFLQQRCRFGSNCRLSHGM 173


>ref|XP_010108285.1| zinc finger CCCH domain-containing protein 22 [Morus notabilis]
 gb|EXC18765.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 503

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 33/50 (66%)
 Frame = +3

Query: 135 MCKFFLQQRCRFGSNCRLSHGMFS*YNKFGK*TLELVSQNLCLSRFIGAS 284
           MCKFFLQQRCRFGSNCRLSHG+    +   K  L +  Q+L  SR   +S
Sbjct: 153 MCKFFLQQRCRFGSNCRLSHGVDVPLSSLKKYILTIWDQSLVGSRIWASS 202


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