BLASTX nr result
ID: Rehmannia29_contig00026126
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00026126
(1166 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075687.1| probable RNA-dependent RNA polymerase 1 [Ses... 648 0.0
gb|PIM98069.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i... 644 0.0
gb|PIM98009.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i... 637 0.0
ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polyme... 613 0.0
ref|XP_022882125.1| probable RNA-dependent RNA polymerase 1 [Ole... 580 0.0
ref|XP_022855381.1| probable RNA-dependent RNA polymerase 1 [Ole... 580 0.0
gb|KZV22426.1| RNA-dependent RNA polymerase 1-like [Dorcoceras h... 574 0.0
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza] 539 e-180
ref|XP_022855379.1| probable RNA-dependent RNA polymerase 1 isof... 532 e-177
ref|XP_016439423.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 497 e-172
ref|XP_022878518.1| probable RNA-dependent RNA polymerase 1 [Ole... 519 e-172
emb|CDP05596.1| unnamed protein product [Coffea canephora] 518 e-172
emb|CDP05599.1| unnamed protein product [Coffea canephora] 512 e-169
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana] 489 e-169
ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polyme... 496 e-163
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 496 e-163
gb|PHT67836.1| RNA-dependent RNA polymerase 1 [Capsicum annuum] 495 e-163
gb|PHT33925.1| hypothetical protein CQW23_25725 [Capsicum baccatum] 495 e-163
ref|XP_016547175.1| PREDICTED: probable RNA-dependent RNA polyme... 494 e-162
ref|XP_019262401.1| PREDICTED: probable RNA-dependent RNA polyme... 491 e-161
>ref|XP_011075687.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
ref|XP_011075688.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
ref|XP_020548818.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 648 bits (1672), Expect = 0.0
Identities = 304/388 (78%), Positives = 343/388 (88%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ A+ VK FLEQ TGQGT++ALEVKPSK+GPR YA+VQF + R AE+
Sbjct: 1 MGKTIQVYGFPYLIAADVVKNFLEQQTGQGTIVALEVKPSKKGPRAYAKVQFTHSRYAEM 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I LAS RLY+G+SYLR W+S DI+ NPRT+VHEMEQVTLNFGCQTSREKFSVLWK
Sbjct: 61 IQNLAST--RLYYGTSYLRVWESDSDIVHNPRTYVHEMEQVTLNFGCQTSREKFSVLWKV 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
SVSVKFGTGMKKMHF+LCHNSVEY+LQLSYENIWQIVLY+PHGQTAKLLLIQLFGAPRI
Sbjct: 119 ASVSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQIVLYHPHGQTAKLLLIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKK+++S++SYF ET DDQWIRTTDFTPSCIGQ+SGLCL+LPYGMRLPNFQD FV+Y +S
Sbjct: 179 YKKVSESIYSYFSETQDDQWIRTTDFTPSCIGQASGLCLELPYGMRLPNFQDHFVYYSKS 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
++PF LE G PF+ NL LVPI+HPPRG ELPYRILFKVC LVQTGCLPGPKLD FF+LV
Sbjct: 239 ENPFHLERGAPFSHNLDLVPILHPPRGFELPYRILFKVCSLVQTGCLPGPKLDARFFQLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
+P+R + +Y+EHALEKLYY+KECCYDP WL EQYEKYRT +EQP SP ISL DGLVYVH
Sbjct: 299 NPQRINTKYVEHALEKLYYLKECCYDPTTWLMEQYEKYRTAKEQPTSPVISLGDGLVYVH 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TPT+VYFSGPEVNVSNRVLRHY D
Sbjct: 359 RVQVTPTKVYFSGPEVNVSNRVLRHYSD 386
>gb|PIM98069.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
Length = 1113
Score = 644 bits (1661), Expect = 0.0
Identities = 301/388 (77%), Positives = 342/388 (88%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK+FLEQ TGQGTV+ALEVKPSK+G R YARVQF N RCA++
Sbjct: 1 MGKTIQVFGFPYLLAAEVVKKFLEQYTGQGTVVALEVKPSKKGARSYARVQFANSRCADV 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
++ LA+ RLY+G+SYL+AW+S DI+QNPR +VHEMEQVTLN GCQTS EKFSVLWKA
Sbjct: 61 VIDLANR--RLYYGTSYLKAWESDTDIVQNPRAYVHEMEQVTLNLGCQTSEEKFSVLWKA 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
SVSVKFG GMKKMHF LCHNSV+YRLQLSYE+IWQIV+YNP G +AK L+IQLFGAPRI
Sbjct: 119 TSVSVKFGLGMKKMHFFLCHNSVQYRLQLSYESIWQIVMYNPRGLSAKFLVIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL DS+HS+FRETPDDQW+RTTDFTPSCIGQSSGLCLQLPYGMRLPNF+D+FV+YKE
Sbjct: 179 YKKLEDSIHSFFRETPDDQWVRTTDFTPSCIGQSSGLCLQLPYGMRLPNFRDNFVYYKER 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ PFRLET P++ N LVPIVHPPRG ELPY+I+FKVC LVQ+GCL GP LD NFFRLV
Sbjct: 239 ETPFRLETAAPYSHNSTLVPIVHPPRGHELPYKIIFKVCSLVQSGCLSGPNLDANFFRLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
+P+R++IRYIEHALEKLYY+K+CCYDPV WL EQY+KYRT +EQP SPAISLDDGLVYVH
Sbjct: 299 NPQRYNIRYIEHALEKLYYLKDCCYDPVPWLIEQYQKYRTLKEQPKSPAISLDDGLVYVH 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TP RVYFSGPEVNVSNRV R Y D
Sbjct: 359 RVQVTPCRVYFSGPEVNVSNRVTRQYHD 386
>gb|PIM98009.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
Length = 1085
Score = 637 bits (1644), Expect = 0.0
Identities = 300/388 (77%), Positives = 339/388 (87%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK+FLEQ TGQGTV+ALEVKPSK+G R YARVQF N RCA++
Sbjct: 1 MGKTIQVFGFPYLLAAEVVKKFLEQYTGQGTVVALEVKPSKKGARSYARVQFANSRCADV 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
++ LA+ RLY+G+SYL+AW+S DI+QNPR +VHEMEQVTLN GCQTS EKFSVLWKA
Sbjct: 61 VIDLANR--RLYYGTSYLKAWESDTDIVQNPRAYVHEMEQVTLNLGCQTSEEKFSVLWKA 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
SVSVKFG GMKKMHF LCHNSV+YRLQLSYE+IWQIV+YNP G +AK L+IQLFGAPRI
Sbjct: 119 SSVSVKFGLGMKKMHFFLCHNSVQYRLQLSYESIWQIVMYNPRGLSAKFLVIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL+ S+HS+FRETPDDQW+RTTDFTPS IGQSSGLCL+LPYGMRLPNF+D FV YKES
Sbjct: 179 YKKLDGSIHSFFRETPDDQWVRTTDFTPSRIGQSSGLCLKLPYGMRLPNFRDDFVCYKES 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ PFRLET P++ N LVPIVHPPRG ELPY+I+FKVC LVQ+GCL GP LD NFFRLV
Sbjct: 239 ETPFRLETAAPYSRNSTLVPIVHPPRGHELPYKIIFKVCSLVQSGCLSGPNLDANFFRLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
+P+R++I YIEHALEKLYY KECCYDPV WL EQYEKYRT +EQP SPAISLDDGLVYVH
Sbjct: 299 NPQRYNITYIEHALEKLYYSKECCYDPVTWLTEQYEKYRTLKEQPISPAISLDDGLVYVH 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TP RVYFSGPE+NVSNRV RHY D
Sbjct: 359 RVQVTPCRVYFSGPEINVSNRVTRHYHD 386
>ref|XP_012847562.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttata]
ref|XP_012847563.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttata]
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Erythranthe guttata]
Length = 1110
Score = 613 bits (1580), Expect = 0.0
Identities = 296/388 (76%), Positives = 334/388 (86%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MG+TI V GFP LV AE VK+FLE TG+GTVIALEVK +K G R YARVQF NIRCAE
Sbjct: 1 MGRTIQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGRRAYARVQFTNIRCAET 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LA RLY+G+SYL+A++S IDI+QNPRTF HEME VTLNFGCQ S KFSVLWK
Sbjct: 61 IIDLAKN--RLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKG 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
ESV+VKFGTGMKKMHF L HNSVEY++QLSYENIWQIVLYN +GQ++KLL+IQLFGAPRI
Sbjct: 119 ESVTVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL+ SV+SYF T DDQW+RTTDFT S IGQSS LCLQLPYGMRLPNF+D+F++YKES
Sbjct: 179 YKKLSGSVYSYFMVTQDDQWVRTTDFTQSLIGQSSSLCLQLPYGMRLPNFRDNFLYYKES 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ PFRLETGVPF+ N LVPIV PP ++LPY +LFKVC LVQTGCLPGPKLD +FF LV
Sbjct: 239 ETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSFFDLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
+P + DIRYIEHALEKLYY+KECCY+P AWL EQYE+YRT +E P SPAI LDDGLVYVH
Sbjct: 299 NPAKHDIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDDGLVYVH 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TPTRVYFSGPEVNVSNRVLRHYRD
Sbjct: 359 RVQVTPTRVYFSGPEVNVSNRVLRHYRD 386
>ref|XP_022882125.1| probable RNA-dependent RNA polymerase 1 [Olea europaea var.
sylvestris]
ref|XP_022882127.1| probable RNA-dependent RNA polymerase 1 [Olea europaea var.
sylvestris]
Length = 1118
Score = 580 bits (1496), Expect = 0.0
Identities = 281/388 (72%), Positives = 321/388 (82%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP LV AE +K FLEQ TG G V+ALEVK SK G R YA+VQF N A+
Sbjct: 1 MGKTIQVFGFPYLVAAEAIKTFLEQHTGHGNVVALEVKQSKGGRRAYAKVQFKNSTHADK 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LA LY+G SYL+AW+ IDI+QNPRT++HEME VTLNFGCQ S EKFSVLWK
Sbjct: 61 IIYLAEKG--LYYGRSYLKAWEMDIDIMQNPRTYLHEMECVTLNFGCQISAEKFSVLWKN 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+VSVKFG+GMKKM+F+ NSVEY+LQLSYENIWQIVLY P GQTAK+LLIQLFGAPRI
Sbjct: 119 TNVSVKFGSGMKKMYFLFSLNSVEYKLQLSYENIWQIVLYCPQGQTAKVLLIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKLN+SV+S+F+ETPDDQWIRTTDFT SCIGQSSG+CLQLPYGM+LPNF D+F +YKE
Sbjct: 179 YKKLNESVYSFFKETPDDQWIRTTDFTQSCIGQSSGVCLQLPYGMKLPNFPDNFAYYKER 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ PF L TG PF N +LVPI+ PP G+ELP ILFK+C LVQ GCLPGP LD NFFRLV
Sbjct: 239 ESPFSLVTGSPFCHNSSLVPILRPPEGIELPCNILFKICSLVQNGCLPGPILDANFFRLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
DP+R DI YIE+ALE LY +KECCY+PV+WL EQY+KYR R P SPAISLDDGLVYV
Sbjct: 299 DPRRIDIGYIEYALETLYNLKECCYNPVSWLGEQYDKYRKMRRPPKSPAISLDDGLVYVR 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TP++VYFSGPEVNVSNRVLRHYR+
Sbjct: 359 RVQVTPSKVYFSGPEVNVSNRVLRHYRN 386
>ref|XP_022855381.1| probable RNA-dependent RNA polymerase 1 [Olea europaea var.
sylvestris]
Length = 1115
Score = 580 bits (1494), Expect = 0.0
Identities = 279/387 (72%), Positives = 321/387 (82%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI VSGFP + AE VK+FLE TG GTV+AL+VK KRG R YARVQF N A+
Sbjct: 1 MGKTIQVSGFPYPIAAETVKKFLEHYTGPGTVVALDVKQFKRGQRAYARVQFKNSTYADR 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LA RL +G+SYL+AW+ IDI+QNPRT++HEME +TLNFGCQ SREKFSVLWK
Sbjct: 61 IICLAKT--RLNYGTSYLKAWEMDIDIMQNPRTYLHEMECITLNFGCQISREKFSVLWKN 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
SVSVKFG +KK++F C+N+VEY+LQLSYENIWQIVLY P GQTAKLLLIQLFGAPRI
Sbjct: 119 TSVSVKFGIALKKIYFFFCYNNVEYKLQLSYENIWQIVLYCPRGQTAKLLLIQLFGAPRI 178
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKK+++S +SYF+ETPDDQWIRTTDFTPSCIGQSSGLCLQL YGM+LP F+D+F ++KES
Sbjct: 179 YKKIDESKYSYFKETPDDQWIRTTDFTPSCIGQSSGLCLQLSYGMKLPTFRDNFAYFKES 238
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ F LETG PF N +LVPI+ PP G+ELP ILFK+C LVQ GCLPGP LD NFFRLV
Sbjct: 239 ESQFSLETGSPFCHNSSLVPILKPPEGIELPCNILFKICNLVQNGCLPGPNLDDNFFRLV 298
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
DP+R DI YIE+ALEKLY +KECCYDPV+WL EQYEKY P SPAISLDDGLVYV
Sbjct: 299 DPQRIDIGYIEYALEKLYNLKECCYDPVSWLMEQYEKYCKMERTPKSPAISLDDGLVYVR 358
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYR 1162
RVQ+TP++VYFSGPEVNVSNRVLRHYR
Sbjct: 359 RVQVTPSKVYFSGPEVNVSNRVLRHYR 385
>gb|KZV22426.1| RNA-dependent RNA polymerase 1-like [Dorcoceras hygrometricum]
Length = 1110
Score = 574 bits (1479), Expect = 0.0
Identities = 267/388 (68%), Positives = 328/388 (84%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKT++VSGFP L+ AE +K + E TG+ TV A+E+KPSK+GPRPYA+VQF+N CA+
Sbjct: 1 MGKTVYVSGFPHLIAAELIKEYFEVYTGRETVDAVEMKPSKQGPRPYAKVQFVNHSCAQQ 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LA+ S RLY+G SYL+A + +DII + + HEME+VTLNFGCQ SR+KF+VLWK
Sbjct: 61 IVALAN-SRRLYYGRSYLKAREMDVDIIPRVKAYSHEMEEVTLNFGCQISRDKFAVLWKG 119
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
VSVKFGTGMKKM+F L N EY+LQLSYENIWQIVLY P QTA+ L+IQLFGAPRI
Sbjct: 120 SKVSVKFGTGMKKMYFHLSFNLDEYKLQLSYENIWQIVLYCPPDQTARFLVIQLFGAPRI 179
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL DS++S+++ET DDQW+RTTDFT SCIGQSSG+CLQLPYGMRLPNF D+FV+YK S
Sbjct: 180 YKKLKDSIYSFYKETSDDQWVRTTDFTSSCIGQSSGICLQLPYGMRLPNFHDNFVYYKVS 239
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
+ PF L+ PF+ NL LVPI++PP G ELPY+ILFK+CGLVQTGCLPGPK+D +F+RLV
Sbjct: 240 ESPFYLQGDSPFSHNLVLVPILNPPSGYELPYKILFKICGLVQTGCLPGPKIDASFYRLV 299
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
+P+R +I YIEHAL+KLYY+KECCYDPV WL+EQY+KY + +E P +P+I LDDGLVYVH
Sbjct: 300 NPQRINITYIEHALDKLYYLKECCYDPVTWLHEQYKKYTSSQEIPKAPSIRLDDGLVYVH 359
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TPT+VYF+GPEVNVSNRVLRHY+D
Sbjct: 360 RVQVTPTKVYFAGPEVNVSNRVLRHYQD 387
>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
Length = 1101
Score = 539 bits (1389), Expect = e-180
Identities = 256/388 (65%), Positives = 315/388 (81%), Gaps = 2/388 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
M KT+HVSGFP L+ AE V++FLE T +G + ALEVKP KRG R YA+VQF + A+
Sbjct: 1 MRKTLHVSGFPKLIAAEEVRKFLEGHTCEGAIEALEVKPGKRGSRAYAKVQFTSKEDADK 60
Query: 182 IMKLASASARLYFGSS--YLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLW 355
I+ LA+ Y G+S YL+A++ + + N R+F+HE++ +TLNFGCQ S+++FSVLW
Sbjct: 61 IIHLANIGLYYYLGNSRSYLKAFEQDTNFV-NHRSFMHELDGLTLNFGCQVSKDRFSVLW 119
Query: 356 KAESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAP 535
+A VSVKFG+ + KMH +C + VEYRLQLSYENIWQIVLYN QT +LLLIQLFGAP
Sbjct: 120 RAADVSVKFGSSLNKMHLFVCDDLVEYRLQLSYENIWQIVLYNSSVQTERLLLIQLFGAP 179
Query: 536 RIYKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYK 715
RIYKKL SV+S++RETPDDQW+RTTDFTPSCIGQSSGLCLQLP ++LP+F+++F+ Y
Sbjct: 180 RIYKKLEYSVYSFYRETPDDQWVRTTDFTPSCIGQSSGLCLQLPRHVKLPDFKNNFMHYT 239
Query: 716 ESQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
S++PF+L G PF NL LVPIV PPRGLELPY++LFKVC LVQTGCLPG KLDT FF+
Sbjct: 240 VSEEPFQLVNGAPFCGNLPLVPIVQPPRGLELPYKLLFKVCSLVQTGCLPGMKLDTEFFQ 299
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
++P+R+ IRYIEHAL+KLYYIKECCYDPVAWL EQY KY+TF E P P ISLDDGLVY
Sbjct: 300 CLNPRRYAIRYIEHALDKLYYIKECCYDPVAWLREQYRKYQTFEELPKPPTISLDDGLVY 359
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHY 1159
+HRVQ+TPTRVYF+GPEVN+SNRVLR +
Sbjct: 360 IHRVQVTPTRVYFAGPEVNMSNRVLRQF 387
>ref|XP_022855379.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Olea europaea
var. sylvestris]
Length = 1116
Score = 532 bits (1371), Expect = e-177
Identities = 257/387 (66%), Positives = 313/387 (80%), Gaps = 1/387 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSK-RGPRPYARVQFMNIRCAE 178
MGKTI VSGFP LV AE +K FLE+ TG G+V+AL+V K + R YA+VQF N A+
Sbjct: 1 MGKTIQVSGFPSLVAAETIKTFLERDTGPGSVVALDVNQCKGKHGRAYAKVQFENSSHAD 60
Query: 179 IIMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWK 358
I LA A LY+ +SYL+AW+ ID++++PRT++H ME+VTLNFGCQ SREKFSVLWK
Sbjct: 61 KIFSLARAR-HLYYDTSYLKAWED-IDMMKSPRTYMHGMERVTLNFGCQISREKFSVLWK 118
Query: 359 AESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPR 538
SVK+G G+KKM F + SV+Y+LQLSYENIW+IVLY P GQTAKLLLIQLFGAP+
Sbjct: 119 RSYTSVKYGIGLKKMFFFFSYYSVQYKLQLSYENIWRIVLYCPRGQTAKLLLIQLFGAPK 178
Query: 539 IYKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKE 718
IYKK+N+SV+SYF+ETPDDQWIRTTDFTPSCIGQSSGLCLQ+ G++LPNF D F +Y+E
Sbjct: 179 IYKKINESVYSYFKETPDDQWIRTTDFTPSCIGQSSGLCLQISSGIKLPNFPDDFAYYEE 238
Query: 719 SQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRL 898
S+ F LETG PF N +LVPI+ PP G++LP +LFK+C LVQ GCLPGP LD+NFFRL
Sbjct: 239 SESQFSLETGSPFCDNSSLVPILCPPDGIKLPCNVLFKICSLVQHGCLPGPNLDSNFFRL 298
Query: 899 VDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYV 1078
VDP+R DIR+I+ ALEKLY +KECCYDPV+WL E Y+KYR P SPAI+L DGLVYV
Sbjct: 299 VDPQRIDIRFIDFALEKLYNLKECCYDPVSWLEEHYDKYRKMEWLPKSPAINLGDGLVYV 358
Query: 1079 HRVQITPTRVYFSGPEVNVSNRVLRHY 1159
+VQ+TP++VYFSGPEV++SNRVLRHY
Sbjct: 359 RKVQVTPSKVYFSGPEVSMSNRVLRHY 385
>ref|XP_016439423.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Nicotiana
tabacum]
Length = 437
Score = 497 bits (1279), Expect = e-172
Identities = 246/390 (63%), Positives = 305/390 (78%), Gaps = 2/390 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK+FLE TG GTV ALEVK SK G R +A+VQF N + AE
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS LY+G SYL+AW+ DI+Q PRT+V M+ VTLNFGCQ S +KF+VL +
Sbjct: 61 IIDLASKG--LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117 KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+ G++LPNF +SF +YKES
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKES 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+ F L+TG F+ + LALVPIVH P G+ELPY+ILFK+ L+Q GC PG L+ NFF+
Sbjct: 237 MNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQ 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP+R +I IEHALEKLYY+KECCYDPV WL EQY++Y R+ P SP+I+LDDGLVY
Sbjct: 297 LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGLVY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
V RV +TP +VYF GPEVNVSNRVLR+Y +
Sbjct: 357 VRRVVVTPCKVYFCGPEVNVSNRVLRNYSE 386
>ref|XP_022878518.1| probable RNA-dependent RNA polymerase 1 [Olea europaea var.
sylvestris]
Length = 1114
Score = 519 bits (1337), Expect = e-172
Identities = 263/387 (67%), Positives = 302/387 (78%), Gaps = 1/387 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGP-RPYARVQFMNIRCAE 178
MGKTI VSGFP LV AE VK FLE TG+G+V+AL V K R YARVQF A+
Sbjct: 1 MGKTIQVSGFPSLVAAETVKTFLELYTGRGSVVALGVNLCKGSHGRAYARVQFETSTHAD 60
Query: 179 IIMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWK 358
II LA A + LY+ +S L+AW + IDI++NPRT++HEME VTLNFG Q SREKFSVLWK
Sbjct: 61 IIFNLAKADS-LYYDASCLKAW-ADIDIMRNPRTYLHEMECVTLNFGSQISREKFSVLWK 118
Query: 359 AESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPR 538
VSVKFG G+KKM+F +NSV+Y+LQLSYENIW+IVLY P GQ +KLLLIQL GAPR
Sbjct: 119 NTRVSVKFGIGLKKMYFFFSYNSVQYKLQLSYENIWRIVLYCPRGQISKLLLIQLVGAPR 178
Query: 539 IYKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKE 718
IYKKLN S +++F+ETPDDQWIRTTDFTPSCIGQSSGLCLQL YGM LPNF D+F YK+
Sbjct: 179 IYKKLNGSDYTFFKETPDDQWIRTTDFTPSCIGQSSGLCLQLSYGMNLPNFLDNFACYKK 238
Query: 719 SQDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRL 898
S F LETG PF N +LVPI+HPP +ELP+ ILF +C LVQ GCLPG LD FFRL
Sbjct: 239 SVSQFSLETGSPFCHNSSLVPILHPPEVIELPWNILFTICTLVQHGCLPGQNLDAKFFRL 298
Query: 899 VDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYV 1078
VDP+R DI IE+ALEKLY +KECCYDPV+WL +QY KY P SPAI LD GLVYV
Sbjct: 299 VDPQRIDIGCIEYALEKLYNLKECCYDPVSWLKKQYHKYFKMGRIPKSPAIRLDYGLVYV 358
Query: 1079 HRVQITPTRVYFSGPEVNVSNRVLRHY 1159
RVQ+TP++VYFSGPEVNVSNRVLRHY
Sbjct: 359 RRVQVTPSKVYFSGPEVNVSNRVLRHY 385
>emb|CDP05596.1| unnamed protein product [Coffea canephora]
Length = 1112
Score = 518 bits (1334), Expect = e-172
Identities = 250/388 (64%), Positives = 300/388 (77%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP +VPAE V +FLE TGQGTV ALE+K SK G R YA+VQF N R AE
Sbjct: 1 MGKTIQVFGFPSVVPAETVTKFLECFTGQGTVYALEIKQSKGGNRAYAKVQFTNDRSAEY 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
IM LA RL +GSSYLRAW+ +D++ R+F H MEQ+ L+FGCQ S+ +FSVL
Sbjct: 61 IMTLAKK--RLNYGSSYLRAWEMDVDLVPRARSFEHNMEQIVLHFGCQVSKNRFSVLRNV 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+VSV+FG GM+KM+F+L S +Y+L+LSYENIWQIVL+ K LLIQLFGAPR+
Sbjct: 119 PNVSVRFGIGMRKMYFILRFRSCDYKLELSYENIWQIVLHR-RSLAPKFLLIQLFGAPRV 177
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
+KKL +S SYF+ETPDDQW+RTTDFT SCIGQSSG+CL+LP G++LPN D F ++KES
Sbjct: 178 FKKLEESTFSYFKETPDDQWVRTTDFTSSCIGQSSGICLELPRGIQLPNLGDYFAWFKES 237
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
F LETG P++ NL L PI+ PP+GL LPY ILFKVC LVQTGCLPGP LD NFFRLV
Sbjct: 238 DSQFFLETGSPYSYNLVLAPILQPPQGLYLPYGILFKVCCLVQTGCLPGPSLDANFFRLV 297
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
DP+R IRYIEHALE LY +KECCY+PV WL EQY+KY R+ P SP ++LDDGLVYV
Sbjct: 298 DPQRIKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTLTLDDGLVYVR 357
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TP +VYF GPEVNVSNRVLR++ +
Sbjct: 358 RVQVTPCKVYFCGPEVNVSNRVLRNFSE 385
>emb|CDP05599.1| unnamed protein product [Coffea canephora]
Length = 1113
Score = 512 bits (1319), Expect = e-169
Identities = 248/388 (63%), Positives = 299/388 (77%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP ++ AE V FLE+ TGQGTV ALEVK SK GPR YARVQF+N R AE
Sbjct: 1 MGKTIQVFGFPYVLAAEIVTEFLERFTGQGTVYALEVKQSKGGPRAYARVQFINDRSAEY 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LA L +GSSYLRAW+ D++ PRT+ H MEQ+ LNFGCQ S +FSVL
Sbjct: 61 IIALAEQC--LNYGSSYLRAWEMDSDLVPRPRTYEHHMEQIVLNFGCQVSENRFSVLCNV 118
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+VSV+FG GM+KM+F+L S +Y+L+LS EN+WQIVL+ GQ AK LLIQL GAPR+
Sbjct: 119 PNVSVRFGIGMRKMYFILHFRSCDYKLELSDENLWQIVLHR-RGQAAKFLLIQLLGAPRV 177
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
++KL +S SYF+ETPDD+W+RTTDFT SCIGQSSG+CL+LP G++LPN +D F +YKES
Sbjct: 178 FQKLEESTFSYFQETPDDRWLRTTDFTSSCIGQSSGICLKLPRGIKLPNLRDYFPWYKES 237
Query: 722 QDPFRLETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLV 901
F LETG P++ NL L PI+HPPRGL LPY ILFKVC LVQ GCLPGP LD NFFRLV
Sbjct: 238 DSQFTLETGSPYSYNLVLAPILHPPRGLYLPYGILFKVCCLVQNGCLPGPSLDANFFRLV 297
Query: 902 DPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVH 1081
DP+R DIRYIEHALE LY + +CCY+PV WL EQY+KY + P SP ++L+ GLVYV
Sbjct: 298 DPQRRDIRYIEHALENLYILNDCCYEPVQWLKEQYDKYDKLLQLPISPTLTLEGGLVYVR 357
Query: 1082 RVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
RVQ+TP +VYF GPEVNVSNRVLRH+ +
Sbjct: 358 RVQVTPCKVYFCGPEVNVSNRVLRHFSE 385
>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
Length = 479
Score = 489 bits (1260), Expect = e-169
Identities = 244/390 (62%), Positives = 305/390 (78%), Gaps = 2/390 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK FLE TG GTV ALEVK SK G R +ARVQF + + AE+
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRSFARVQFASNKSAEL 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS LY+G SYL+AW+ DI+Q PRT+V M+ VTLNFGCQ S +KF+VL +
Sbjct: 61 IIDLASMG--LYYGPSYLKAWEMNTDIVQ-PRTYVQHMDGVTLNFGCQISDKKFAVLG-S 116
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L + S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117 KDVSIKFGIGLKKIYFFLSYGSSDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YK+L +S +S+F+ETPDDQW+RTTDFTPS IG SS LCL+ G+RLPNF++SF +YKES
Sbjct: 177 YKRLEESCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGIRLPNFRESFFYYKES 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+ L TG F+ + LALVPIVH P G++LPY+ILFK+ L+Q GC PG L+ NFF+
Sbjct: 237 GNQVILRTGFTFSFSQKLALVPIVHLPNGVDLPYKILFKISSLIQHGCFPGVALNFNFFQ 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP+R +I IEHALEKLYY+KECCYDPV WL EQY++Y R+ P SP+I+LDDGLVY
Sbjct: 297 LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLVY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
V RV +TP +VYFSGPEVNVSNRVLR+Y +
Sbjct: 357 VRRVVVTPCKVYFSGPEVNVSNRVLRNYSE 386
>ref|XP_009623376.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis]
ref|XP_009623378.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis]
ref|XP_018632650.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis]
Length = 1116
Score = 496 bits (1278), Expect = e-163
Identities = 246/390 (63%), Positives = 305/390 (78%), Gaps = 2/390 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK+FLE TG GTV ALEVK SK G R +A+VQF N + AE
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS LY+G SYL+AW+ DI+Q PRT+V M+ VTLNFGCQ S +KF+VL +
Sbjct: 61 IIDLASKG--LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117 KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+ G++LPNF +SF +YKES
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKES 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+ F L+TG F+ + LALVPIVH P G+ELPY+ILFK+ L+Q GC PG L+ NFF+
Sbjct: 237 MNQFILQTGFTFSFSQKLALVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFFQ 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP+R +I IEHALEKLYY+KECCYDPV WL EQY++Y R+ P SP+I+LDDGLVY
Sbjct: 297 LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGLVY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
V RV +TP +VYF GPEVNVSNRVLR+Y +
Sbjct: 357 VRRVVVTPCKVYFCGPEVNVSNRVLRNYSE 386
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 496 bits (1277), Expect = e-163
Identities = 246/390 (63%), Positives = 304/390 (77%), Gaps = 2/390 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK+FLE TG GTV ALEVK SK G R +A+VQF N + AE
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS LY+G SYL+AW+ DI+Q PRT+V M+ VTLNFGCQ S +KF+VL +
Sbjct: 61 IIDLASKG--LYYGPSYLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-S 116
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117 KDVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+ G++LPNF +SF +YKES
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKES 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+ F L+TG F+ + LALVPIVH P G+ELPY+ILFK+ L+Q GC PG L+ NFF+
Sbjct: 237 MNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQ 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP+R +I IEHALEKLYY+KECCYDPV WL EQY++Y R+ P SP I+LDDGLVY
Sbjct: 297 LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGLVY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
V RV +TP +VYF GPEVNVSNRVLR+Y +
Sbjct: 357 VRRVVVTPCKVYFCGPEVNVSNRVLRNYSE 386
>gb|PHT67836.1| RNA-dependent RNA polymerase 1 [Capsicum annuum]
Length = 1116
Score = 495 bits (1275), Expect = e-163
Identities = 248/388 (63%), Positives = 304/388 (78%), Gaps = 2/388 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI VSGFP L+ AE VK FLE TG GTV ALEVK SK GPR +A+VQF+N CAE
Sbjct: 1 MGKTIQVSGFPHLLSAEVVKSFLEGHTGYGTVTALEVKLSKGGPRAFAKVQFVNSICAEK 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS RLYFG+SYL+AW+ D++Q RT+V+ M+ +TLNFGCQ S EKF+VL
Sbjct: 61 IICLASR--RLYFGTSYLKAWEMRTDMVQL-RTYVNHMDDITLNFGCQISDEKFAVLGST 117
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPR+
Sbjct: 118 Q-VSIKFGIGLKKIYFFLSCGSADYKLQLSYENIWQVVLHRPYGQRAQFLLIQLFGAPRV 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL +S +S+F+ETPDDQW+RTTDF PS IG SS LCL+ P G++LPNFQ+SF +Y E
Sbjct: 177 YKKLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLEFPKGIQLPNFQESFYYYAER 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
++ F L+TG FA + ALVPIV PPRG+ LPY+ILFK+ LVQ GC+PG L+ NFFR
Sbjct: 237 ENQFTLQTGFTFAFSEKSALVPIVQPPRGVALPYKILFKISSLVQHGCVPGLALNVNFFR 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP R +I IEHALEKLYY+KECCYDPV WL EQY+ Y R+ P SP+I+LDDGL+Y
Sbjct: 297 LVDPLRKNIACIEHALEKLYYLKECCYDPVRWLTEQYDGYLKGRQLPKSPSITLDDGLMY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHY 1159
V RV +TP +VYF GPEVNVSNRVLR+Y
Sbjct: 357 VRRVVVTPCKVYFHGPEVNVSNRVLRNY 384
>gb|PHT33925.1| hypothetical protein CQW23_25725 [Capsicum baccatum]
Length = 1116
Score = 495 bits (1274), Expect = e-163
Identities = 249/388 (64%), Positives = 303/388 (78%), Gaps = 2/388 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI VSGFP L+ AE VK FLE TG GTV ALEVK SK GPR +A+VQF+N AE
Sbjct: 1 MGKTIQVSGFPHLLSAEVVKSFLEGHTGYGTVTALEVKLSKGGPRAFAKVQFVNSISAEK 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS RLYFG+SYL+AW+ D++Q RT+V+ M+ +TLNFGCQ S EKF+VL
Sbjct: 61 IIYLASR--RLYFGTSYLKAWEMQTDMVQL-RTYVNHMDDITLNFGCQISEEKFAVLGST 117
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRI
Sbjct: 118 Q-VSIKFGIGLKKIYFFLSCGSADYKLQLSYENIWQVVLHRPYGQRAQFLLIQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL +S +S+F+ETPDDQW+RTTDF PS IG SS LCL+ P G++LPNFQ+SF +Y E
Sbjct: 177 YKKLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLEFPKGIQLPNFQESFYYYAER 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+PF L+TG FA + ALVPIV PPRG+ LPY+ILFK+ LVQ GC+PG L+ NFFR
Sbjct: 237 GNPFTLQTGFTFAFSEKSALVPIVQPPRGVALPYKILFKISSLVQHGCVPGLALNVNFFR 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP R +I IEHALEKLYY+KECCYDPV WL EQY+ Y R+ P SP+I+LDDGL+Y
Sbjct: 297 LVDPLRKNIACIEHALEKLYYLKECCYDPVRWLTEQYDGYLKGRQLPKSPSITLDDGLMY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHY 1159
V RV +TP +VYF GPEVNVSNRVLR+Y
Sbjct: 357 VRRVVVTPCKVYFHGPEVNVSNRVLRNY 384
>ref|XP_016547175.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Capsicum annuum]
Length = 1116
Score = 494 bits (1272), Expect = e-162
Identities = 248/388 (63%), Positives = 303/388 (78%), Gaps = 2/388 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI VSGFP L+ AE VK FLE TG GTV ALEVK SK GPR +A+VQF+N CAE
Sbjct: 1 MGKTIQVSGFPHLLSAEVVKSFLEGHTGYGTVTALEVKLSKGGPRAFAKVQFVNSICAEK 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
I+ LAS RLYFG+SYL+AW+ D++Q RT+V+ M +TLNFGCQ S EKF+VL
Sbjct: 61 IICLASR--RLYFGTSYLKAWEMQTDMVQL-RTYVNHMYDITLNFGCQISDEKFAVLGST 117
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPR+
Sbjct: 118 Q-VSIKFGIGLKKIYFFLSCGSADYKLQLSYENIWQVVLHRPYGQRAQFLLIQLFGAPRV 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YKKL +S +S+F+ETPDDQW+RTTDF PS IG SS LCL+ P G++LPNFQ+SF +Y E
Sbjct: 177 YKKLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLEFPKGIQLPNFQESFYYYAER 236
Query: 722 QDPFRLETGVPFAAN--LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
++ F L+TG FA + ALVPIV PPRG+ LPY+ILFK+ LVQ GC+PG L+ NFFR
Sbjct: 237 ENQFTLQTGFTFAFSEKSALVPIVQPPRGVALPYKILFKISSLVQHGCVPGLALNVNFFR 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP R +I IEHALEKLYY+KECCYDPV WL EQY+ Y R+ P SP+I+LDDGL+Y
Sbjct: 297 LVDPLRKNIACIEHALEKLYYLKECCYDPVRWLTEQYDGYLKGRQLPKSPSITLDDGLMY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHY 1159
V RV +TP +VYF GPEVNVSNRVLR+Y
Sbjct: 357 VRRVVVTPCKVYFHGPEVNVSNRVLRNY 384
>ref|XP_019262401.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
attenuata]
ref|XP_019262402.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
attenuata]
gb|OIT37821.1| rna-dependent rna polymerase 1 [Nicotiana attenuata]
Length = 1115
Score = 491 bits (1263), Expect = e-161
Identities = 245/390 (62%), Positives = 302/390 (77%), Gaps = 2/390 (0%)
Frame = +2
Query: 2 MGKTIHVSGFPDLVPAERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEI 181
MGKTI V GFP L+ AE VK FLE TG GTV ALEVK SK G R +A+VQF N + AE+
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEL 60
Query: 182 IMKLASASARLYFGSSYLRAWDSPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKA 361
IM LAS LY+G SYL+AW+ DI+Q PRT+V M+ VTLNFGCQ S +KF+VL +
Sbjct: 61 IMDLASEG--LYYGPSYLQAWEMKTDIVQ-PRTYVQHMDGVTLNFGCQISDKKFAVLG-S 116
Query: 362 ESVSVKFGTGMKKMHFVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRI 541
+ VS+KFG G+KK++F L + S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRI
Sbjct: 117 KDVSIKFGIGLKKIYFFLSYGSTDYKLQLSYENIWQVVLHCPYGQKAQFLLLQLFGAPRI 176
Query: 542 YKKLNDSVHSYFRETPDDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKES 721
YK+L DS +S+F+ETPDDQW+RTTDFTPS IG SS LCL+ G+RLPNF SF +YKES
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGVRLPNFSGSFFYYKES 236
Query: 722 QDPFRLETGVPFA--ANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFR 895
+ L+TG F+ L+LVPIVH P G+ELPY+ILFK+ L+Q GC PG L+ NFF+
Sbjct: 237 VNQVILQTGFTFSFFQKLSLVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFFQ 296
Query: 896 LVDPKRFDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVY 1075
LVDP+R +I IEHALEKLYY+KECCYDPV WL EQY++Y R+ P SP+I+LDDGLVY
Sbjct: 297 LVDPRRRNIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKHRQLPKSPSITLDDGLVY 356
Query: 1076 VHRVQITPTRVYFSGPEVNVSNRVLRHYRD 1165
V RV +TP +VYF GPEVNVSNRVLR+Y +
Sbjct: 357 VRRVLVTPCKVYFCGPEVNVSNRVLRNYSE 386