BLASTX nr result
ID: Rehmannia29_contig00026022
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00026022
(776 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_016570903.1| PREDICTED: cytochrome b-like [Capsicum annuum] 75 4e-12
gb|PHT98346.1| Protein Ycf2 [Capsicum chinense] 76 5e-12
gb|PPD88054.1| hypothetical protein GOBAR_DD14995 [Gossypium bar... 64 2e-09
gb|EFH64640.1| expressed protein [Arabidopsis lyrata subsp. lyrata] 61 6e-09
gb|ADK66930.1| PetD, partial (chloroplast) [Paeonia delavayi] >g... 54 3e-06
gb|ATX63227.1| PetD, partial (chloroplast) [Excoecaria agallocha... 54 3e-06
gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Tritic... 46 3e-06
gb|ANS80852.1| cytochrome b6-f complex subunit IV (chloroplast) ... 56 5e-06
gb|ANS80757.1| cytochrome b6-f complex subunit IV (chloroplast) ... 56 5e-06
gb|OTG29929.1| putative cytochrome b6/f complex, subunit IV [Hel... 55 1e-05
>ref|XP_016570903.1| PREDICTED: cytochrome b-like [Capsicum annuum]
Length = 334
Score = 75.5 bits (184), Expect = 4e-12
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +1
Query: 55 DICLPHWNSQPNVSLFQPPCNPYTEDRLVRLKRIFSMIKS 174
DICLPH NSQPNVSLFQ PC PYTEDRLVRLK IFSMI S
Sbjct: 157 DICLPHGNSQPNVSLFQSPCKPYTEDRLVRLKGIFSMISS 196
>gb|PHT98346.1| Protein Ycf2 [Capsicum chinense]
Length = 589
Score = 76.3 bits (186), Expect = 5e-12
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 46 VCVDICLPHWNSQPNVSLFQPPCNPYTEDRLVRLKRIFSMIKS 174
+ DICLPH NSQPNVSLFQ PC PYTEDRLVRLK IFSMI S
Sbjct: 97 IVTDICLPHGNSQPNVSLFQSPCKPYTEDRLVRLKGIFSMISS 139
>gb|PPD88054.1| hypothetical protein GOBAR_DD14995 [Gossypium barbadense]
Length = 86
Score = 63.5 bits (153), Expect = 2e-09
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 76 NSQPNVSLFQPPCNPYTEDRLVRLKRIFSMIKSE 177
NSQPNVSLFQPPC P+T+DRLVRLKRIFSMI+ +
Sbjct: 48 NSQPNVSLFQPPCKPHTKDRLVRLKRIFSMIRPD 81
>gb|EFH64640.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
Length = 50
Score = 60.8 bits (146), Expect = 6e-09
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -3
Query: 174 GFDHRKDSLQANQPIFCIGVTRWLEQRHIWL 82
G+DHRKDSL+ NQPI C+G+T+WLEQRHIWL
Sbjct: 20 GYDHRKDSLKVNQPIPCMGLTQWLEQRHIWL 50
>gb|ADK66930.1| PetD, partial (chloroplast) [Paeonia delavayi]
gb|ADK66932.1| PetD, partial (chloroplast) [Paeonia ludlowii]
gb|ADK66934.1| PetD, partial (chloroplast) [Paeonia yananensis]
gb|ADK66936.1| PetD, partial (chloroplast) [Paeonia jishanensis]
gb|ADK66938.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|ADK66940.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|ADK66942.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|ADK66944.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|ADK66946.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50864.1| PetD, partial (chloroplast) [Paeonia delavayi]
gb|AEO50866.1| PetD, partial (chloroplast) [Paeonia ludlowii]
gb|AEO50867.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50869.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50871.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50873.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50875.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50877.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50879.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50881.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50883.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50885.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50887.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50889.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50891.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50893.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50895.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50897.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50899.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50901.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50903.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50905.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50907.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50909.1| PetD, partial (chloroplast) [Paeonia rockii]
gb|AEO50911.1| PetD, partial (chloroplast) [Paeonia rockii]
Length = 64
Score = 53.9 bits (128), Expect = 3e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 705 MSGSFGGWIYTNSPIPITKKPDLN 776
MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYKNSPIPITKKPDLN 24
>gb|ATX63227.1| PetD, partial (chloroplast) [Excoecaria agallocha]
gb|ATX63228.1| PetD, partial (chloroplast) [Excoecaria agallocha]
gb|ATX63230.1| PetD, partial (chloroplast) [Excoecaria agallocha]
Length = 66
Score = 53.9 bits (128), Expect = 3e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 705 MSGSFGGWIYTNSPIPITKKPDLN 776
MSGSFGGWIY NSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYKNSPIPITKKPDLN 24
>gb|EMS62068.1| DNA-directed RNA polymerase subunit alpha [Triticum urartu]
Length = 430
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -2
Query: 730 IHPPKEPDMRIFYHPARARLKRTK 659
IHPPKEPDMRI++HPARAR+K +
Sbjct: 339 IHPPKEPDMRIYHHPARARVKEIR 362
Score = 33.5 bits (75), Expect(2) = 3e-06
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 581 FPELQLSIA-KNLVISLNKYSIPKSAYKVDHDMIKCFLGRL 462
FP+L L + +N I + K SI K AYK DHD + C L +
Sbjct: 389 FPKLHLQLLIENNPILMGKCSISKWAYKFDHDQLLCGLSHV 429
>gb|ANS80852.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex
szechwanensis]
gb|ANS80947.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex pubescens]
gb|ANS81042.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex polyneura]
Length = 174
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 705 MSGSFGGWIYTNSPIPITKKPDLN 776
MSGSFGGWIYTNSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYTNSPIPITKKPDLN 24
>gb|ANS80757.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex latifolia]
gb|ANS81137.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex sp. XY-2016]
gb|ANS81232.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex delavayi]
gb|ANS81327.1| cytochrome b6-f complex subunit IV (chloroplast) [Ilex wilsonii]
Length = 174
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 705 MSGSFGGWIYTNSPIPITKKPDLN 776
MSGSFGGWIYTNSPIPITKKPDLN
Sbjct: 1 MSGSFGGWIYTNSPIPITKKPDLN 24
>gb|OTG29929.1| putative cytochrome b6/f complex, subunit IV [Helianthus annuus]
Length = 449
Score = 55.1 bits (131), Expect(2) = 1e-05
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 696 KILMSGSFGGWIYTNSPIPITKKPDLN 776
KI+MSGS GGWIY NSPIPITKKPDLN
Sbjct: 273 KIIMSGSSGGWIYKNSPIPITKKPDLN 299
Score = 23.1 bits (48), Expect(2) = 1e-05
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 656 SFGSFESCSSRMIK 697
S SF SCSSRM+K
Sbjct: 260 SVSSFYSCSSRMMK 273