BLASTX nr result
ID: Rehmannia29_contig00025855
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00025855
(916 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera] 257 6e-86
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa] 258 6e-85
gb|KYP66638.1| Retrovirus-related Pol polyprotein from transposo... 272 5e-84
gb|KYP40054.1| Retrovirus-related Pol polyprotein from transposo... 275 1e-83
gb|KYP65984.1| Retrovirus-related Pol polyprotein from transposo... 276 2e-83
gb|OMO97059.1| Integrase, catalytic core [Corchorus capsularis] 266 8e-82
emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera] 186 3e-78
emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera] 182 4e-74
emb|CAN69052.1| hypothetical protein VITISV_007852 [Vitis vinifera] 178 4e-74
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc... 178 2e-72
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 184 1e-71
gb|KYP39716.1| Retrovirus-related Pol polyprotein from transposo... 221 1e-70
gb|KYP45190.1| Retrovirus-related Pol polyprotein from transposo... 224 1e-70
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza... 169 2e-70
gb|KYP35727.1| Retrovirus-related Pol polyprotein from transposo... 217 6e-70
gb|OMO59932.1| reverse transcriptase [Corchorus capsularis] 245 7e-70
emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera] 210 2e-69
emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vit... 209 3e-68
emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera] 207 3e-68
gb|PNX73065.1| retrovirus-related Pol polyprotein from transposo... 211 4e-68
>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
Length = 2026
Score = 257 bits (657), Expect(2) = 6e-86
Identities = 145/287 (50%), Positives = 179/287 (62%), Gaps = 22/287 (7%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S I+ YFIGYP+KSKGY FYCPNH RIVET NARF+ENG+ISGS EP+K I+EI
Sbjct: 448 KLDSRTISGYFIGYPDKSKGYXFYCPNHXVRIVETXNARFLENGEISGSNEPRKXDIEEI 507
Query: 300 RVSLI--YFNNIVLVP-----IVASHPHNIS----------EQEIEVPNRSKIMNKF*IC 428
RV + + ++VP + + HN E +E P +
Sbjct: 508 RVDIXPPFLPQEIIVPQPXQQVEXNEQHNRDGSLPXENIPIENXVEPPQPXPLRRS---- 563
Query: 429 QR*MNHIKS*CYVGLKGK*D-----RLSPMIM*FIILSMNVI*ALIRTISFHQAMECNNS 593
QR + YV + D R P +SF QAME ++S
Sbjct: 564 QRERRPAITDDYVVYLXESDFDIGIRKDP-------------------VSFSQAMESDDS 604
Query: 594 KK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGY 773
K +AM EELKSM+ N VW+L+ELP K VGCKWVFK+KRD+KGN+ER+KARLVAKG+
Sbjct: 605 SKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGF 664
Query: 774 TQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
TQK+GIDYK+TFSPVSK+DSLRI+M LVAH+DLELHQMD KTAF+NG
Sbjct: 665 TQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNG 711
Score = 90.1 bits (222), Expect(2) = 6e-86
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK VPKTP+ELWT RK SLRH+H+WGCPAE R+YNPHEKKLD+
Sbjct: 407 VPSKAVPKTPFELWTXRKPSLRHIHIWGCPAETRIYNPHEKKLDS 451
>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
Length = 931
Score = 258 bits (659), Expect(2) = 6e-85
Identities = 137/267 (51%), Positives = 182/267 (68%), Gaps = 2/267 (0%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ +FIGYPEKSKGY FYCPNH+ RIVET NARFIEN + SGSG+P+KV IQE+
Sbjct: 379 KLDSRTVSGFFIGYPEKSKGYTFYCPNHSMRIVETGNARFIENIETSGSGKPRKVDIQEV 438
Query: 300 RVSLIYFNNIVLVPIVASHP--HNISEQEIEVPNRSKIMNKF*ICQR*MNHIKS*CYVGL 473
++ VL P++A + N+ ++ P +N+ Q + + +
Sbjct: 439 QIK-------VLPPVIAPNVVVPNVQHDIVQAPLNENNVNEPVTIQEENSEPQVNLRRSI 491
Query: 474 KGK*DRLSPMIM*FIILSMNVI*ALIRTISFHQAMECNNSKK*FDAMKEELKSMSDNNVW 653
+ + + + + I S + ISF +AM+ ++S+ A KEE+KSM DN VW
Sbjct: 492 RERRSAIPSDYVVYAIESECDLSLDEDPISFQKAMKSDSSENWLIAAKEEMKSMGDNKVW 551
Query: 654 ELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKETFSPVSKEDS 833
+LVELP G++ VG KW+FK+KR+SKGN+ERYKARLV KG+TQKDGIDYKETFSPVSK+DS
Sbjct: 552 DLVELPNGFRTVGSKWIFKTKRNSKGNIERYKARLVVKGFTQKDGIDYKETFSPVSKKDS 611
Query: 834 LRIVMTLVAHYDLELHQMDAKTAFMNG 914
LRIV+ LVAHY+LELHQMD KTAF+NG
Sbjct: 612 LRIVLALVAHYNLELHQMDVKTAFLNG 638
Score = 85.9 bits (211), Expect(2) = 6e-85
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK VPKTP+ELWT RK SL+HL VWGCPAEV++YNPHEKKLD+
Sbjct: 338 VPSKAVPKTPFELWTGRKPSLKHLRVWGCPAEVKLYNPHEKKLDS 382
>gb|KYP66638.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 550
Score = 272 bits (695), Expect = 5e-84
Identities = 151/274 (55%), Positives = 188/274 (68%), Gaps = 9/274 (3%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K + I+ YFIGYPEKSKGYRFYCPNH TRI+ET NARFIENG++SGS P+KV+IQE+
Sbjct: 249 KLDARTISGYFIGYPEKSKGYRFYCPNHTTRIIETGNARFIENGEVSGSETPRKVEIQEM 308
Query: 300 RVS--LIYFNNIVLVPIVASHPHNISEQEIEVP---NRSKIMNKF*ICQR*MNHIKS*CY 464
RV L +N V+VP V +N EQ+ P N ++ ++
Sbjct: 309 RVQVPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPI---------VEEPQQ 359
Query: 465 VGLK-GK*DRLSPMIM*FIIL---SMNVI*ALIRTISFHQAMECNNSKK*FDAMKEELKS 632
+ L+ + +R S + ++I S N + ++F QAM +N++K DAMK ELKS
Sbjct: 360 IALRRSQRERRSAIPNDYVIYLQESENDLGIENDLVTFSQAMNGDNAEKWLDAMKAELKS 419
Query: 633 MSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKETFS 812
M N VW+ VELPEG KRVGCKWVFK+K DS GN+E YKA+LVAKG+TQKDGIDYKETFS
Sbjct: 420 MEHNRVWDRVELPEGCKRVGCKWVFKTKCDSHGNLECYKAKLVAKGFTQKDGIDYKETFS 479
Query: 813 PVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
PVSK+DSLRI+M LVAHYDLELHQMD KT F+NG
Sbjct: 480 PVSKKDSLRIIMALVAHYDLELHQMDVKTVFLNG 513
Score = 97.8 bits (242), Expect = 5e-19
Identities = 76/206 (36%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Frame = +2
Query: 2 VPSKVVPKTPYEL----WTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDANQRLFHWLS*K 169
VPSK VP TP+EL WT RK SLRHLHVWGCPAE+R YNP EKKLDA ++
Sbjct: 204 VPSKAVPNTPFELPFELWTGRKPSLRHLHVWGCPAEIRFYNPQEKKLDARTISGYF---- 259
Query: 170 V*GV*VLLS*PQYENSRDRQCSVH*EWPNQWEWGTKK---------STNPRNSGFTDLF* 322
+ P+ C H E G + S PR ++
Sbjct: 260 -------IGYPEKSKGYRFYCPNH--TTRIIETGNARFIENGEVSGSETPRKVEIQEM-- 308
Query: 323 *HCSCSYCCITS----TQHIGARN*SSKQIENNEQILNMPEINEP----HQELMLCRSER 478
CI++ Q I N +Q N+ N E+NEP Q++ L RS+R
Sbjct: 309 -RVQVPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPIVEEPQQIALRRSQR 367
Query: 479 QIRPAISDDYVIYYLEYECDLSIDKD 556
+ R AI +DYVIY E E DL I+ D
Sbjct: 368 ERRSAIPNDYVIYLQESENDLGIEND 393
>gb|KYP40054.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 680
Score = 275 bits (702), Expect = 1e-83
Identities = 151/274 (55%), Positives = 190/274 (69%), Gaps = 9/274 (3%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K + I+ YFIGYPEKSKGYRFYCPNH TRI+ET NARFIENG++SGS P+KV+IQE+
Sbjct: 240 KLDARTISGYFIGYPEKSKGYRFYCPNHTTRIIETGNARFIENGEVSGSETPRKVEIQEM 299
Query: 300 RVS--LIYFNNIVLVPIVASHPHNISEQEIEVP---NRSKIMNKF*ICQR*MNHIKS*CY 464
RV L +N V+VP V +N EQ+ P N ++ ++
Sbjct: 300 RVQVPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPI---------VEEPQQ 350
Query: 465 VGLK-GK*DRLSPMIM*FIIL---SMNVI*ALIRTISFHQAMECNNSKK*FDAMKEELKS 632
+ L+ + +R S + +++ S N + ++F QA+ +N++K DAMK ELKS
Sbjct: 351 IALRRSQRERRSAIPNDYVVYLQESENDLGIENDPVTFSQAINGDNAEKWLDAMKAELKS 410
Query: 633 MSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKETFS 812
M N VW+LVELPEG KRVGCKWVFK+KRDS GN+E YKARLVAKG+TQK+GIDYKETFS
Sbjct: 411 MEHNRVWDLVELPEGCKRVGCKWVFKTKRDSHGNLECYKARLVAKGFTQKNGIDYKETFS 470
Query: 813 PVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
PVSK+DSLRI+M LVAHYDLELHQMD KT F+NG
Sbjct: 471 PVSKKDSLRIIMALVAHYDLELHQMDVKTVFLNG 504
Score = 102 bits (254), Expect = 2e-20
Identities = 75/202 (37%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDANQRLFHWLS*KV*GV 181
VPSK VPKTP+ELW RK SLRHLHVWGCPAE+R YNP EKKLDA ++
Sbjct: 199 VPSKAVPKTPFELWIGRKPSLRHLHVWGCPAEIRFYNPKEKKLDARTISGYF-------- 250
Query: 182 *VLLS*PQYENSRDRQCSVH*EWPNQWEWGTKK---------STNPRNSGFTDLF**HCS 334
+ P+ C H E G + S PR ++
Sbjct: 251 ---IGYPEKSKGYRFYCPNH--TTRIIETGNARFIENGEVSGSETPRKVEIQEM---RVQ 302
Query: 335 CSYCCITS----TQHIGARN*SSKQIENNEQILNMPEINEP----HQELMLCRSERQIRP 490
CI++ Q I N +Q N+ N E+NEP Q++ L RS+R+ R
Sbjct: 303 VPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPIVEEPQQIALRRSQRERRS 362
Query: 491 AISDDYVIYYLEYECDLSIDKD 556
AI +DYV+Y E E DL I+ D
Sbjct: 363 AIPNDYVVYLQESENDLGIEND 384
>gb|KYP65984.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 789
Score = 276 bits (707), Expect = 2e-83
Identities = 152/274 (55%), Positives = 190/274 (69%), Gaps = 9/274 (3%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K + IN YFIGYPEKSKGYRFYCPNH TRI+ET NARFIENG++SGS P+KV+IQE+
Sbjct: 379 KLDARTINGYFIGYPEKSKGYRFYCPNHTTRIIETGNARFIENGEVSGSETPRKVEIQEM 438
Query: 300 RVS--LIYFNNIVLVPIVASHPHNISEQEIEVP---NRSKIMNKF*ICQR*MNHIKS*CY 464
RV L +N V+VP V +N EQ+ P N ++ ++
Sbjct: 439 RVQVPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPI---------VEEPQQ 489
Query: 465 VGLK-GK*DRLSPMIM*FIIL---SMNVI*ALIRTISFHQAMECNNSKK*FDAMKEELKS 632
+ L+ + +R S + +++ S N + ++F QA+ +N++K DAMK ELKS
Sbjct: 490 IALRRSQRERRSAIPNDYVVYLQESENDLGIENDPVTFSQAINGDNAEKWLDAMKAELKS 549
Query: 633 MSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKETFS 812
M N VW+ VELPEG KRVGCKWVFK+KRDS GN+E YKARLVAKG+TQK+GIDYKETFS
Sbjct: 550 MEHNRVWDFVELPEGCKRVGCKWVFKTKRDSHGNLECYKARLVAKGFTQKNGIDYKETFS 609
Query: 813 PVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
PVSK+DSLRI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 610 PVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNG 643
Score = 103 bits (256), Expect = 1e-20
Identities = 75/202 (37%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDANQRLFHWLS*KV*GV 181
VPSK VPKTP+ELWT RK SLRHLHVWGCPA++R YNP EKKLDA ++
Sbjct: 338 VPSKAVPKTPFELWTGRKPSLRHLHVWGCPAKIRFYNPQEKKLDARTINGYF-------- 389
Query: 182 *VLLS*PQYENSRDRQCSVH*EWPNQWEWGTKK---------STNPRNSGFTDLF**HCS 334
+ P+ C H E G + S PR ++
Sbjct: 390 ---IGYPEKSKGYRFYCPNH--TTRIIETGNARFIENGEVSGSETPRKVEIQEM---RVQ 441
Query: 335 CSYCCITS----TQHIGARN*SSKQIENNEQILNMPEINEP----HQELMLCRSERQIRP 490
CI++ Q I N +Q N+ N E+NEP Q++ L RS+R+ R
Sbjct: 442 VPLTCISNKVVVPQVIEPINNHEEQQTNDPITHNEVEVNEPIVEEPQQIALRRSQRERRS 501
Query: 491 AISDDYVIYYLEYECDLSIDKD 556
AI +DYV+Y E E DL I+ D
Sbjct: 502 AIPNDYVVYLQESENDLGIEND 523
>gb|OMO97059.1| Integrase, catalytic core [Corchorus capsularis]
Length = 766
Score = 266 bits (681), Expect(2) = 8e-82
Identities = 156/277 (56%), Positives = 187/277 (67%), Gaps = 20/277 (7%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K + I+ YFI YPEKSKGYRFY PNH+TRIVE+ NA FIENGQ SGSGE +KV I+EI
Sbjct: 332 KLDARTISGYFIDYPEKSKGYRFYYPNHSTRIVESGNASFIENGQFSGSGEQRKVDIKEI 391
Query: 300 RVSLIYFNNI--VLVPIVASHPHNISEQE------------IEVPNRSK--IMNKF*ICQ 431
+ N+ V+VP+V S HN+ EQ ++ PN+ N +
Sbjct: 392 QGETPMSNDSHQVVVPLVVSQLHNVREQRIHVRNLQGEHEGVDPPNQQDEPANNTQVEIE 451
Query: 432 R*MNHIKS*CYVGLKGK*DRLSPMI-M*FIILSMNVI*ALI---RTISFHQAMECNNSKK 599
+ +N + V L+ + P I F + S+ L +SF QAMECNNS+K
Sbjct: 452 QTVNEPQE---VALRRSVRQRRPTISQDFEVYSIEHECDLSIDDDPVSFKQAMECNNSEK 508
Query: 600 *FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQ 779
+A+KEELKSM DN VWEL+EL EG KRVGCKWVFK+KRDSKGN+ERYKARLVAKGY Q
Sbjct: 509 WLNAIKEELKSMDDNKVWELIELLEGSKRVGCKWVFKTKRDSKGNIERYKARLVAKGYIQ 568
Query: 780 KDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMD 890
KDGIDYKETFSPVSK+DSLRIVM LVA+YDLELHQMD
Sbjct: 569 KDGIDYKETFSPVSKKDSLRIVMPLVAYYDLELHQMD 605
Score = 67.0 bits (162), Expect(2) = 8e-82
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2
Query: 23 KTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
+T E+ RK SLRHLHVWGCPAEVR+YNPHEKKLDA
Sbjct: 298 RTLMEMVRSRKPSLRHLHVWGCPAEVRIYNPHEKKLDA 335
>emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]
Length = 1193
Score = 186 bits (472), Expect(4) = 3e-78
Identities = 85/119 (71%), Positives = 102/119 (85%)
Frame = +3
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
IS Q + +NS+K + MK+E+KSM DN VW+LVELP+G K +GCKW+FK+KRDSKGN+
Sbjct: 704 ISVSQVKQSSNSEKWIEVMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNI 763
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
RYKARLVAKG+TQK+GIDYKETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 764 VRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNG 822
Score = 80.9 bits (198), Expect(4) = 3e-78
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT +K S+RHLHVWGCPAE R Y P+EKKLD+
Sbjct: 509 VPSKAVAKTPYELWTSKKPSIRHLHVWGCPAEARPYKPNEKKLDS 553
Score = 52.8 bits (125), Expect(4) = 3e-78
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GY E+S+G++FY P+ + ET NA+FIE+ ++SG +KV +E
Sbjct: 550 KLDSRTVSCYFVGYSERSRGFKFYDPSTRS-FFETGNAKFIEDVELSGREPLRKVVFEE- 607
Query: 300 RVSLIYFNNIVLVPIVAS-HPHNISEQEIE 386
V +PI+A+ H H + I+
Sbjct: 608 --------EFVNIPIIATGHGHIMFNDTIQ 629
Score = 44.3 bits (103), Expect(4) = 3e-78
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 398 IENNEQILNMPEINEPHQELMLCRSERQIRPAISDDYVIYYLEYECDLSIDKD 556
I+ ++++ P+ EP ++ L RS R+ R ISDDYV+Y+ E+E D+ ++ D
Sbjct: 652 IQVHQEVTQQPQ--EPQVQVPLRRSTRERRSTISDDYVVYFQEHEFDMGLEDD 702
>emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera]
Length = 1290
Score = 182 bits (461), Expect(4) = 4e-74
Identities = 83/119 (69%), Positives = 102/119 (85%)
Frame = +3
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
IS Q + ++S+K +AMK+E+KSM DN VW+LVELP+G K +GCKW+FK+KRDSKGN+
Sbjct: 783 ISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNI 842
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
RYKARLVAKG+TQK+GIDYKE FSPVS +DS RI+M LVAHYDLELHQM+ KTAF+NG
Sbjct: 843 VRYKARLVAKGFTQKEGIDYKENFSPVSSKDSFRIIMALVAHYDLELHQMNVKTAFLNG 901
Score = 74.3 bits (181), Expect(4) = 4e-74
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT +K S+ HLHVWG PAE R Y P+EKKLD+
Sbjct: 580 VPSKAVAKTPYELWTSKKPSISHLHVWGYPAEARPYKPNEKKLDS 624
Score = 53.5 bits (127), Expect(4) = 4e-74
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GY E+S+G++FY P+ + ET NA+FIE+ ++SG +KV +E
Sbjct: 621 KLDSRIVSCYFVGYFERSRGFKFYDPSIRS-FFETGNAKFIEDVELSGRESLRKVLFEEK 679
Query: 300 RVSLIYFNNIVLVPIVAS-HPHNISEQEIE 386
V++ I+ +PI+ + H H + + I+
Sbjct: 680 SVNI----PIINIPIITTGHGHIMFDDTIQ 705
Score = 40.4 bits (93), Expect(4) = 4e-74
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 398 IENNEQILNMP-EINEPHQELMLCRSERQIRPAISDDYVIYYLEYECDLSIDKD 556
I+ ++++ P E P ++ L RS R+ R ISDDYV+Y E+E D+ ++ D
Sbjct: 728 IQVHQEVTQQPQEPQVPQVQVPLRRSTRERRSTISDDYVVYLQEHEFDMGLEDD 781
>emb|CAN69052.1| hypothetical protein VITISV_007852 [Vitis vinifera]
Length = 1104
Score = 178 bits (452), Expect(4) = 4e-74
Identities = 84/119 (70%), Positives = 98/119 (82%)
Frame = +3
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
IS Q + NS+K +AMK+E+K M DN VW+LVELPEG K +GCKW+FK+KRDSKGN+
Sbjct: 679 ISVSQVKQSFNSEKWIEAMKKEMKPMKDNVVWDLVELPEGVKPIGCKWIFKTKRDSKGNI 738
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
RYKA LVAKG+TQK+GIDYKETFSPVS DS RI+M LVAHYDLELHQMD K AF+NG
Sbjct: 739 VRYKACLVAKGFTQKEGIDYKETFSPVSSNDSFRIIMALVAHYDLELHQMDVKIAFLNG 797
Score = 79.3 bits (194), Expect(4) = 4e-74
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT +K S+RHLHVWGCP E R Y P+EKKLD+
Sbjct: 486 VPSKAVAKTPYELWTSKKPSIRHLHVWGCPVEARPYKPNEKKLDS 530
Score = 52.4 bits (124), Expect(4) = 4e-74
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GY E+S+G++FY P+ + ET NA+FIE+ ++SG + +KV ++
Sbjct: 527 KLDSKIVSCYFVGYSERSRGFKFYSPSSRS-FFETGNAKFIEDVELSGRKQLRKVVFEKE 585
Query: 300 RVSL 311
+S+
Sbjct: 586 SISI 589
Score = 40.0 bits (92), Expect(4) = 4e-74
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 398 IENNEQILNMPEINEPHQELMLCRSERQIRPAISDDYVIYYLEYECDLSIDKD 556
I+ +E++ P+ EP ++ L RS ++ R I DDYV+Y E+E ++ ++ D
Sbjct: 627 IQVHEEVTQQPQ--EPQVQVPLRRSTKEKRSTIXDDYVVYLQEHEFBMGLEDD 677
>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 178 bits (452), Expect(4) = 2e-72
Identities = 82/119 (68%), Positives = 101/119 (84%)
Frame = +3
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
ISF +AM+ +S + AMK+E+KSMS N VW+LVE+PEG K VGCKWV+K+KRD KGN+
Sbjct: 883 ISFKEAMKGEHSSEWLKAMKDEMKSMSTNKVWDLVEIPEGAKTVGCKWVYKTKRDPKGNI 942
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
+R+K RLVAKG+TQ++GIDY ETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 943 KRFKVRLVAKGFTQREGIDYNETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNG 1001
Score = 72.4 bits (176), Expect(4) = 2e-72
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDANQRLFHWL 160
+PSK VPKTP+ELWT +K +L + HVWGCPAE RV+NP+ KLD H++
Sbjct: 675 IPSKSVPKTPFELWTGKKPTLNYFHVWGCPAEARVFNPNMGKLDLKTISCHFI 727
Score = 69.3 bits (168), Expect(4) = 2e-72
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +3
Query: 138 INDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEIRVSLIY 317
I+ +FIGYP+KSK YRFYCPN T+ +ET +A F+EN I GS P++V ++E R +
Sbjct: 722 ISCHFIGYPDKSKAYRFYCPNQFTKFIETRHAVFLENDIIKGSMTPREVVLEEKRNYVPM 781
Query: 318 FNNIVLVPIVASHPH 362
I+ P+ ++H H
Sbjct: 782 --PIIKEPVFSTHTH 794
Score = 23.9 bits (50), Expect(4) = 2e-72
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 ENNE-----QILNMPEINEPHQELMLCRSERQIRPAISDDYVIYYLE 526
ENNE QI+ + NEP + RS+R + AI DY+ Y E
Sbjct: 822 ENNEDAQQPQIVIDEQNNEPVR-----RSQRVRKSAIPSDYITYMNE 863
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 184 bits (468), Expect(4) = 1e-71
Identities = 87/119 (73%), Positives = 100/119 (84%)
Frame = +3
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
I+F QA + +NS K +AM EE KSM DN VWELV LP G K +GCKW+FK+KRDS GNV
Sbjct: 726 INFQQAXKSSNSXKWIEAMNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNV 785
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
ERYKARLVAKG+TQK+GID+KETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 786 ERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNG 844
Score = 79.0 bits (193), Expect(4) = 1e-71
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VP+K KTPYELWT RK SL+H H+WGCPAE R Y PHEKKLD+
Sbjct: 519 VPTKAAAKTPYELWTGRKPSLKHFHIWGCPAEARPYKPHEKKLDS 563
Score = 40.4 bits (93), Expect(4) = 1e-71
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 407 NEQILNMPEINEPHQELMLCRSERQIRPAISDDYVIYYLEYECDLSIDKDNLI 565
NE I + +P + + L RS R+ R AISDDY++Y E E + + +D+ I
Sbjct: 674 NEDIXXEEQTQQPQENMPLRRSTRERRNAISDDYIVYLQEREVESGMMEDDPI 726
Score = 37.7 bits (86), Expect(4) = 1e-71
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCP---NHNTRIV---ETDNARFIENGQISGSGEPKK 281
K S ++ YFIGY E+S+G++FY P N IV E + I+N Q+S
Sbjct: 560 KLDSKTVSSYFIGYAERSRGFKFYDPAIRNQARNIVFEEEEGSTIAIDNVQVS-----LP 614
Query: 282 VQIQEIRVSLIYFNNIVLVPIVASHPHNISEQEIEVPNRSKIMNK 416
+ QE+ + +NIV P++A+ + E++ + P + + K
Sbjct: 615 IIDQEVNLDPQPTDNIV-QPLIANE-DIVPEEQTQQPQENMPLRK 657
>gb|KYP39716.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1331
Score = 221 bits (564), Expect(2) = 1e-70
Identities = 128/277 (46%), Positives = 175/277 (63%), Gaps = 12/277 (4%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GYPE+S+GY+FY P + ET NARF+E+ + + V +E
Sbjct: 659 KLESRTVSCYFVGYPERSRGYKFYNPTTRS-FFETGNARFLEDVEFGKEENIRNVVFEE- 716
Query: 300 RVSLIYFNNIVLVPIVASHP-------HNISEQEIEVPNRSKIMNKF*ICQR*MNHIKS* 458
+ ++ VLVPI P H + + + +++ + I Q +
Sbjct: 717 --EPVIDSDQVLVPITIPVPTPVIGDNHGVIPDIVPTQDNIEVLPQIPIEQAQQSQ---- 770
Query: 459 CYVGLK-GK*DRLSPMIM*FIILSMNVI*ALIRT----ISFHQAMECNNSKK*FDAMKEE 623
V L+ +R S + +I+ + T I+F QAM+ ++S+K DAMK+E
Sbjct: 771 -EVPLRRSTRERKSAIPDDYIVFLQEHEDGIGLTEDDPINFCQAMQSSSSQKWIDAMKDE 829
Query: 624 LKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKE 803
+KSM DN+VW+LVELPEG K +GCKW+FK+KRDSKGN+ERYKARLVAKG+TQK+GIDYKE
Sbjct: 830 MKSMQDNDVWDLVELPEGVKPIGCKWIFKTKRDSKGNIERYKARLVAKGFTQKEGIDYKE 889
Query: 804 TFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
TFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 890 TFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNG 926
Score = 74.7 bits (182), Expect(2) = 1e-70
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELW ++ SL+HLH+WGCPAE R Y PHE KL++
Sbjct: 618 VPSKAVNKTPYELWMGKRPSLKHLHIWGCPAEARPYRPHESKLES 662
>gb|KYP45190.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1045
Score = 224 bits (570), Expect(2) = 1e-70
Identities = 127/276 (46%), Positives = 175/276 (63%), Gaps = 11/276 (3%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GYPE+S+GY+FY P + ET+NARF+E+ + + V +E
Sbjct: 373 KMESRTVSCYFVGYPERSRGYKFYNPTTRS-FFETENARFLEDVEFGKEENIRNVVFEE- 430
Query: 300 RVSLIYFNNIVLVPIVASHP-------HNISEQEIEVPNRSKIMNKF*ICQR*MNHIKS* 458
+ ++ VLVPI P H + + + +++ + I Q + S
Sbjct: 431 --KPVIDSDQVLVPITIPVPTPVIGDNHGVIPDIVPTQDNIEVLPQIPIEQAQQSQEVSL 488
Query: 459 CYVGLKGK*DRLSPMIM*FIILSMNVI*ALIRT----ISFHQAMECNNSKK*FDAMKEEL 626
+ +R S + +I+ + T I+F QAM+ ++S+K DAMK+E+
Sbjct: 489 ----RRSTRERKSAIPDDYIVFLQEHEDGIGLTEDDPINFCQAMQSSSSQKWIDAMKDEM 544
Query: 627 KSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKET 806
KSM DN+VW+LVELPEG K +GCKW+FK+KRDSKGN+ERYKARLVAKG+TQK+GIDYKET
Sbjct: 545 KSMQDNDVWDLVELPEGVKPIGCKWIFKTKRDSKGNIERYKARLVAKGFTQKEGIDYKET 604
Query: 807 FSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
FSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 605 FSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNG 640
Score = 72.4 bits (176), Expect(2) = 1e-70
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT ++ SL+HLH+WGCPAE R Y HE K+++
Sbjct: 332 VPSKAVNKTPYELWTGKRPSLKHLHIWGCPAEARPYRLHESKMES 376
>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1390
Score = 169 bits (429), Expect(4) = 2e-70
Identities = 77/118 (65%), Positives = 99/118 (83%)
Frame = +3
Query: 561 SFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVE 740
S+ +AM S + +AMK+E+KSM N+VW+L E+P+G K VGCKWV+K+K DS+GN+E
Sbjct: 873 SYEEAMRSARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIE 932
Query: 741 RYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
++KARLVAKG+TQ++GIDY ETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 933 KFKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMALVAHYDLELHQMDVKTAFLNG 990
Score = 68.9 bits (167), Expect(4) = 2e-70
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDANQRLFHWL 160
VPSK VPKTPYELWT R SL HL VWG PAE +V+NP+ KLD H++
Sbjct: 661 VPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFI 713
Score = 68.9 bits (167), Expect(4) = 2e-70
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +3
Query: 138 INDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEIRVSL 311
++ +FIGYPE+SKGYRFYCPN T+ VET +A F+E+ I GS +++ ++E RVS+
Sbjct: 708 VSCHFIGYPERSKGYRFYCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSV 765
Score = 30.0 bits (66), Expect(4) = 2e-70
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 14/61 (22%)
Frame = +2
Query: 386 SSKQIENNEQILNMPEIN-----EPHQELMLC---------RSERQIRPAISDDYVIYYL 523
S++ + E+ L P+I+ E HQE + RSER R AI DDY +Y +
Sbjct: 803 STEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVYNI 862
Query: 524 E 526
E
Sbjct: 863 E 863
>gb|KYP35727.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 935
Score = 217 bits (552), Expect(2) = 6e-70
Identities = 125/277 (45%), Positives = 175/277 (63%), Gaps = 12/277 (4%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GYPE+S+GY+FY P + ET NARF+E+ + + V +E
Sbjct: 659 KLESRTVSCYFVGYPERSRGYKFYNPTTRS-FFETGNARFLEDVEFGKEENIRNVVFEE- 716
Query: 300 RVSLIYFNNIVLVPIVASHP-------HNISEQEIEVPNRSKIMNKF*ICQR*MNHIKS* 458
+ ++ VLVPI P H + + + +++ + I Q +
Sbjct: 717 --EPVIDSDQVLVPITIPVPTPVIGDNHGVIPDIVPTQDNIEVLPQIPIEQAQQSQ---- 770
Query: 459 CYVGLK-GK*DRLSPMIM*FIILSMNVI*ALIRT----ISFHQAMECNNSKK*FDAMKEE 623
V L+ +R S + +I+ + T I+F QAM+ ++S+K DAMK+E
Sbjct: 771 -EVPLRRSTRERKSAIPDDYIVFLQEHEDGIGLTEDDPINFCQAMQSSSSQKWIDAMKDE 829
Query: 624 LKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKE 803
+KSM DN+VW+LVELPEG K +GCKW+FK+KRDSKGN+ERYKARLVAKG+TQK+GIDYKE
Sbjct: 830 MKSMQDNDVWDLVELPEGVKPIGCKWIFKTKRDSKGNIERYKARLVAKGFTQKEGIDYKE 889
Query: 804 TFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
TFSPVS +DS RI+M LVAHYDLE++Q+D KTAF+NG
Sbjct: 890 TFSPVSSKDSFRIIMALVAHYDLEIYQIDVKTAFLNG 926
Score = 77.0 bits (188), Expect(2) = 6e-70
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT ++ SL+HLH+WGCPAE R Y PHE KL++
Sbjct: 618 VPSKAVNKTPYELWTGKRPSLKHLHIWGCPAEARPYRPHESKLES 662
>gb|OMO59932.1| reverse transcriptase [Corchorus capsularis]
Length = 2144
Score = 245 bits (625), Expect = 7e-70
Identities = 139/239 (58%), Positives = 164/239 (68%), Gaps = 6/239 (2%)
Frame = +3
Query: 216 VETDNARFIENGQISGSGEPKKVQIQEIRVSLIYFNNI--VLVPIVASHPHNISEQEIEV 389
VE+ NARFIENGQ SGSGE +KV I+EI+ + N+ +VP+V S HN+ EQ I V
Sbjct: 1791 VESRNARFIENGQFSGSGEQRKVDIKEIQREIPTSNDSHQAVVPLVVSQLHNVREQRIHV 1850
Query: 390 PNRSKIMNKF*ICQR*MNHIKS*CYVGLKGK*DRLSPMI-M*FIILSMNVI*ALI---RT 557
N + V L+ + P I F + S+ L
Sbjct: 1851 TNPQ---------------VNEPQEVALRRPVRQRRPAISQDFEVYSIEHECDLSIDDDP 1895
Query: 558 ISFHQAMECNNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNV 737
+SF QAMECNNS+K +AMKEELKSM DN VWEL+ELPEG K+VGCKWVFK+KRDSKGN+
Sbjct: 1896 VSFKQAMECNNSEKWLNAMKEELKSMDDNKVWELIELPEGSKQVGCKWVFKTKRDSKGNI 1955
Query: 738 ERYKARLVAKGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
ERY ARL+AKGYTQKDGIDY+ETFSPVSK+DSLRIVM LVAHYDLELHQMD KTAF+NG
Sbjct: 1956 ERYMARLLAKGYTQKDGIDYEETFSPVSKKDSLRIVMVLVAHYDLELHQMDVKTAFLNG 2014
>emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
Length = 1601
Score = 210 bits (534), Expect(2) = 2e-69
Identities = 125/284 (44%), Positives = 168/284 (59%), Gaps = 19/284 (6%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YFIGY E+S+G++FY P + I ET A F E+ + G + + + +E
Sbjct: 995 KLDSKTVSSYFIGYAERSRGFKFYDPAIRS-IFETGTATFFEDVEFGGRNQARNIVFEEE 1053
Query: 300 RVSLIYFNNI-VLVPIVASH-------PHNI-----------SEQEIEVPNRSKIMNKF* 422
S I +N+ V +PI+ +NI SE++ + P + + +
Sbjct: 1054 EGSTIAIDNVQVSLPIIDQEVNLDPQPTYNIVQPLIANEDITSEEQTQQPQENMPLRR-- 1111
Query: 423 ICQR*MNHIKS*CYVGLKGK*DRLSPMIM*FIILSMNVI*ALIRTISFHQAMECNNSKK* 602
R + S Y+ + + S M+ I+F QAM+ +NS+K
Sbjct: 1112 -STRERRNAISDDYIVYLQEREVESGMME-------------DDPINFQQAMKSSNSQKW 1157
Query: 603 FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQK 782
+AM EE KSM DN VWELV LP G K +GCKW+FK+KRDS GNVERYKARLVAKG+TQK
Sbjct: 1158 IEAMNEEYKSMQDNKVWELVSLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQK 1217
Query: 783 DGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
+GID+KETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 1218 EGIDFKETFSPVSMKDSFRIIMALVAHYDLELHQMDVKTAFLNG 1261
Score = 82.4 bits (202), Expect(2) = 2e-69
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VP+KV KTPYELWT RKSSL+H H+WGCPAE R Y PHEKKLD+
Sbjct: 954 VPTKVAAKTPYELWTGRKSSLKHFHIWGCPAEARPYKPHEKKLDS 998
>emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vitis vinifera]
Length = 1356
Score = 209 bits (533), Expect(2) = 3e-68
Identities = 119/268 (44%), Positives = 162/268 (60%), Gaps = 3/268 (1%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YFIGY E+S+G++FY P + I ET A F E+ + G + + + +E
Sbjct: 684 KLDSKTVSSYFIGYAERSRGFKFYDPAIRS-IFETGTATFFEDVEFGGRNQARNIVFEEE 742
Query: 300 RVSLIYFNNIVLVPIVASHPHNISEQEIEVPNRSKIMNKF*ICQR*MNHIKS*CYVGLKG 479
S I F+N+ + + N+ Q + + I N+ + + +
Sbjct: 743 EGSTIAFDNVQVSLPIIDQEVNLDPQPTDNIVQPLIANEDIAPEEQTQQPQENMPLRRST 802
Query: 480 K*DRLSPMIM*FIILSMNVI*ALIRT---ISFHQAMECNNSKK*FDAMKEELKSMSDNNV 650
+ R + + L + + + I+F QAM+ +NS K +AM EE KSM DN V
Sbjct: 803 RERRNAISDDYIVYLQEREVESGMMEDDPINFQQAMKSSNSHKWIEAMNEEYKSMQDNKV 862
Query: 651 WELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGIDYKETFSPVSKED 830
WELV LP G K +GCKW+FK+KRDS GNVERYKARLVAKG+TQK+GID+KETFSPVS +D
Sbjct: 863 WELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKD 922
Query: 831 SLRIVMTLVAHYDLELHQMDAKTAFMNG 914
S RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 923 SFRIIMALVAHYDLELHQMDVKTAFLNG 950
Score = 79.0 bits (193), Expect(2) = 3e-68
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VP+K KTPYELWT RK SL+H H+WGCPAE R Y PHEKKLD+
Sbjct: 643 VPTKAAAKTPYELWTGRKPSLKHFHIWGCPAEARPYKPHEKKLDS 687
>emb|CAN78069.1| hypothetical protein VITISV_032701 [Vitis vinifera]
Length = 1381
Score = 207 bits (527), Expect(2) = 3e-68
Identities = 121/290 (41%), Positives = 167/290 (57%), Gaps = 25/290 (8%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YF+GY E+S+G++FY P+ + ET NA+FIE+ ++SG +KV +E
Sbjct: 723 KLDSRTVSCYFVGYSERSRGFKFYDPSTRS-FFETGNAKFIEDVELSGREPLRKVVFEEE 781
Query: 300 RVSL---------IYFNNIV--------------LVPIVASHPHNISEQEIEVPNRSKIM 410
V++ I FN+ + + P P + ++ + P ++
Sbjct: 782 FVNIPIITTGHGHIMFNDTIQNVQSITGIQDTPEIPPAQVMEPIQVHQEVTQQPQEPQVQ 841
Query: 411 NKF*ICQR*MNHIKS*CYVGLKGK*DRLSPMIM*FIILSMNVI*ALIRT--ISFHQAMEC 584
R S YV + L + + IS Q +
Sbjct: 842 VPLRRSTRERRSTISDDYV----------------VYLQEHEFDMGLEDDPISVSQVKQS 885
Query: 585 NNSKK*FDAMKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVA 764
+NS+K +AMK+E+KSM DN VW+LVELP+ K +GCKW+FK+KRDSKGN+ RYKARLVA
Sbjct: 886 SNSEKWIEAMKDEMKSMKDNGVWDLVELPKXVKPIGCKWIFKTKRDSKGNIVRYKARLVA 945
Query: 765 KGYTQKDGIDYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
KG+TQK+GIDYKETFSPVS +DS RI+M LVAHYDLELHQMD KTAF+NG
Sbjct: 946 KGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNG 995
Score = 80.9 bits (198), Expect(2) = 3e-68
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VPSK V KTPYELWT +K S+RHLHVWGCPAE R Y P+EKKLD+
Sbjct: 682 VPSKAVAKTPYELWTSKKPSIRHLHVWGCPAEARPYKPNEKKLDS 726
>gb|PNX73065.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 911
Score = 211 bits (537), Expect(2) = 4e-68
Identities = 127/281 (45%), Positives = 164/281 (58%), Gaps = 16/281 (5%)
Frame = +3
Query: 120 KRSSMPINDYFIGYPEKSKGYRFYCPNHNTRIVETDNARFIENGQISGSGEPKKVQIQEI 299
K S ++ YFIGY E+S+GY+FY P N+ I ET A F E+ + G + + ++E
Sbjct: 288 KLDSRTVSSYFIGYSERSRGYKFYDPKLNS-IFETGTATFFEDIEFGGKNKVRDFVLEEE 346
Query: 300 RVS------LIYFNNIVLVP---IVASHPHN----ISEQEIEVPNRSKIMNKF*I---CQ 431
V+ ++ F+ P IV P I E++ + P I + +
Sbjct: 347 SVTIPEPIHIVAFDQANTEPPQDIVEIPPTQDDLVIHEEQTQDPQEQVIQEPIQLRRSTR 406
Query: 432 R*MNHIKS*CYVGLKGK*DRLSPMIM*FIILSMNVI*ALIRTISFHQAMECNNSKK*FDA 611
N I + L+ + M I+F QAM+ +NS+K +A
Sbjct: 407 ERKNAIPDDFVIYLQEHEENNGTMED--------------DPINFRQAMQDSNSEKWIEA 452
Query: 612 MKEELKSMSDNNVWELVELPEGYKRVGCKWVFKSKRDSKGNVERYKARLVAKGYTQKDGI 791
MKEE KSM DN VWELV LPEG K +GCKW+FK+KRDS GNVERYKARLVAKGYTQK+GI
Sbjct: 453 MKEEYKSMQDNKVWELVPLPEGVKPIGCKWIFKTKRDSNGNVERYKARLVAKGYTQKEGI 512
Query: 792 DYKETFSPVSKEDSLRIVMTLVAHYDLELHQMDAKTAFMNG 914
D+KETFSPVS +DS R +M LVAHYDLELHQMD KTAF+NG
Sbjct: 513 DFKETFSPVSSKDSFRTIMALVAHYDLELHQMDVKTAFLNG 553
Score = 76.6 bits (187), Expect(2) = 4e-68
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2
Query: 2 VPSKVVPKTPYELWTCRKSSLRHLHVWGCPAEVRVYNPHEKKLDA 136
VP+K KTPYELWT RK SL+H HVWGCPAE R Y P+EKKLD+
Sbjct: 247 VPTKAATKTPYELWTGRKPSLKHFHVWGCPAEARPYRPNEKKLDS 291