BLASTX nr result

ID: Rehmannia29_contig00025784 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025784
         (405 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020551664.1| pentatricopeptide repeat-containing protein ...    57   1e-06

>ref|XP_020551664.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
            [Sesamum indicum]
 ref|XP_020551665.1| pentatricopeptide repeat-containing protein MRL1, chloroplastic
            [Sesamum indicum]
          Length = 1190

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -3

Query: 400  EKRMDLSSSLRHLGSGISRQQRKIRTGHLSLE 305
            EK++DLSSS+RHLGSGISRQQRKIRT H SLE
Sbjct: 1159 EKKIDLSSSIRHLGSGISRQQRKIRTVHFSLE 1190


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