BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025407
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX79108.1| copia-type polyprotein, partial [Trifolium pratense]   216   3e-65
gb|PKA46818.1| Retrovirus-related Pol polyprotein from transposo...   190   8e-56
gb|KYP47168.1| Retrovirus-related Pol polyprotein from transposo...   178   1e-54
gb|KZV32174.1| retrovirus-related Pol polyprotein from transposo...   190   4e-54
gb|PKU75919.1| Retrovirus-related Pol polyprotein from transposo...   176   4e-53
emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis tha...   184   1e-52
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   187   3e-52
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   187   3e-52
gb|KZV34378.1| Integrase, catalytic core domain containing prote...   181   1e-51
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         185   1e-51
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   185   1e-51
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   185   1e-51
gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposo...   183   1e-51
dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subt...   184   1e-51
gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposo...   177   1e-51
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   184   2e-51
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid...   184   3e-51
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...   184   4e-51
gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposo...   184   4e-51
gb|PKA46730.1| Retrovirus-related Pol polyprotein from transposo...   184   4e-51

>gb|PNX79108.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 535

 Score =  216 bits (550), Expect = 3e-65
 Identities = 101/137 (73%), Positives = 119/137 (86%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LF+DDYTRM+WIYFL+QK EAF  FL FKALVE QSG  +KTLRTDRGGEF+Y PF+ 
Sbjct: 394 FLLFVDDYTRMIWIYFLDQKSEAFVKFLHFKALVENQSGHKLKTLRTDRGGEFIYKPFLN 453

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+  GI R+LT+  TPQQNGVAERKNR IVEMARSMLK KGLPN +WAEAV +A+YILN
Sbjct: 454 YCEEQGIHRQLTIRHTPQQNGVAERKNRTIVEMARSMLKGKGLPNNFWAEAVSSAVYILN 513

Query: 56  RSPTKAVQNKTPYEAWY 6
           RSPTKAV+++TP+EAW+
Sbjct: 514 RSPTKAVRDRTPFEAWH 530


>gb|PKA46818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 485

 Score =  190 bits (483), Expect = 8e-56
 Identities = 92/136 (67%), Positives = 106/136 (77%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDDYTRM W+YFL  K EA   F  FKA VERQSG+ IK LRTDRGGEFL + F  
Sbjct: 206 FILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKA 265

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+ NGI R LT   TP+QNGVAERKNR IVEMARS+LK KG+PN +WAE+V TA+Y+LN
Sbjct: 266 FCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLN 325

Query: 56  RSPTKAVQNKTPYEAW 9
            SPTKA+ N+T YE W
Sbjct: 326 ISPTKAILNRTLYEVW 341


>gb|KYP47168.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP47194.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP47195.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 181

 Score =  178 bits (452), Expect = 1e-54
 Identities = 85/136 (62%), Positives = 107/136 (78%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFI D++R+ W+YFL  KLE F  F +FK LVE+QSG  IK LR+DRG E+    F +
Sbjct: 12  FILFIYDFSRITWVYFLKTKLEVFGIFKKFKTLVEKQSGKQIKVLRSDRGKEYTSFEFDK 71

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+  GI R++TV  TPQQNGV+ERKNR ++EMARSMLK+KGLPN +WAEAV T +Y+LN
Sbjct: 72  FCEDEGIDRQITVRYTPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTVVYLLN 131

Query: 56  RSPTKAVQNKTPYEAW 9
           R PTKAV++KTP EAW
Sbjct: 132 RCPTKAVRDKTPIEAW 147


>gb|KZV32174.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dorcoceras hygrometricum]
          Length = 699

 Score =  190 bits (482), Expect = 4e-54
 Identities = 91/136 (66%), Positives = 107/136 (78%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LF+DDY+RM W+YFL  K EAF  F +FKALVE+Q G  +K LRTDRGGEF    F +
Sbjct: 371 FLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQ 430

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ +GI + LT   TP+QNGVAERKNR IVEMARSMLK KGLP  +WAEAV TA+Y++N
Sbjct: 431 YCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLIN 490

Query: 56  RSPTKAVQNKTPYEAW 9
            SPTKAV NKTPYEAW
Sbjct: 491 LSPTKAVMNKTPYEAW 506


>gb|PKU75919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 241

 Score =  176 bits (447), Expect = 4e-53
 Identities = 86/136 (63%), Positives = 103/136 (75%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDDYTRM W+YFL +K E F  F  FK LVE QSG  IK LR+DRGGEF    F +
Sbjct: 12  FILFIDDYTRMAWVYFLKEKSETFGIFKNFKLLVENQSGQKIKILRSDRGGEFNSCQFED 71

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +CK  G++ +LTV+ TPQQNGV ERKNR ++EMARSML  K +P  +WAEAV TA+Y+LN
Sbjct: 72  FCKEEGLEHQLTVAYTPQQNGVTERKNRTVMEMARSMLIAKDIPKKFWAEAVNTAVYVLN 131

Query: 56  RSPTKAVQNKTPYEAW 9
           R PTKAV++ TP EAW
Sbjct: 132 RCPTKAVKDITPIEAW 147


>emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis thaliana]
          Length = 623

 Score =  184 bits (468), Expect = 1e-52
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+D GGEF    F++
Sbjct: 46  FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLK 105

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 106 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 165

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 166 RSPTKSVSGKTPQEAW 181


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  187 bits (474), Expect = 3e-52
 Identities = 88/136 (64%), Positives = 109/136 (80%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+DRGGEF    F++
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 669 RSPTKSVSGKTPQEAW 684


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
 gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  187 bits (474), Expect = 3e-52
 Identities = 88/136 (64%), Positives = 109/136 (80%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+DRGGEF    F++
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 669 RSPTKSVSGKTPQEAW 684


>gb|KZV34378.1| Integrase, catalytic core domain containing protein [Dorcoceras
           hygrometricum]
          Length = 578

 Score =  181 bits (460), Expect = 1e-51
 Identities = 85/136 (62%), Positives = 107/136 (78%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL  K EAF  F +FKALVE++SG+ IK LRTDRGGEF  N F  
Sbjct: 410 FVLFIDDFSRKTWVYFLKYKSEAFDAFKKFKALVEKESGYEIKALRTDRGGEFTSNEFNS 469

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+ +GI+R LTV R+PQQNGVAERKNR I+ MAR+MLK K +P  +WAEAV  A+Y+ N
Sbjct: 470 FCELHGIRRPLTVPRSPQQNGVAERKNRTILNMARTMLKSKNMPKEFWAEAVACAVYLSN 529

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+++N TP EAW
Sbjct: 530 RSPTKSLKNVTPQEAW 545


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  185 bits (470), Expect = 1e-51
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+DRGGEF    F++
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGV ERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 669 RSPTKSVSGKTPQEAW 684


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  185 bits (470), Expect = 1e-51
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+DRGGEF    F++
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGV ERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 669 RSPTKSVSGKTPQEAW 684


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  185 bits (470), Expect = 1e-51
 Identities = 88/137 (64%), Positives = 105/137 (76%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LF DD++RM W+YFL  K E F TF +FKA VE+QSG  IK LRTDRGGEFL N F  
Sbjct: 520 FLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKV 579

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+  G+ R LT   +P+QNGVAERKNR +VEMARSM+K K L N +WAE V TA+Y+LN
Sbjct: 580 FCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLN 639

Query: 56  RSPTKAVQNKTPYEAWY 6
            SPTKAV N+TPYEAWY
Sbjct: 640 ISPTKAVLNRTPYEAWY 656


>gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 723

 Score =  183 bits (465), Expect = 1e-51
 Identities = 86/136 (63%), Positives = 110/136 (80%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDD+++M W+YFL  K E F  F +FKALVE+QSG  IK  R+DRG E+    F +
Sbjct: 511 FILFIDDFSKMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVFRSDRGKEYTSREFDK 570

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+  GI+++LTV+ TPQ+NGV+ERKNR ++EMARSMLK+KGLPN +WAEAV TA+Y+LN
Sbjct: 571 FCEDEGIEQQLTVAYTPQKNGVSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLN 630

Query: 56  RSPTKAVQNKTPYEAW 9
           R PTKAVQ+KTP EAW
Sbjct: 631 RCPTKAVQDKTPIEAW 646


>dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subterraneum]
          Length = 818

 Score =  184 bits (467), Expect = 1e-51
 Identities = 86/136 (63%), Positives = 112/136 (82%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDD++RM W+YF+ +K E F  F +FKALVE+QSG  IK LR+DRG E+  + F +
Sbjct: 491 FILFIDDFSRMTWVYFIKEKSEVFGIFKKFKALVEKQSGKNIKMLRSDRGKEYNSHEFDK 550

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+  GI+++LTV+ +PQQNG++ERKNR ++EMARSM+KDKGLPN +WAEAV TA+YILN
Sbjct: 551 FCEDEGIEQQLTVAYSPQQNGMSERKNRTVMEMARSMMKDKGLPNTFWAEAVYTAVYILN 610

Query: 56  RSPTKAVQNKTPYEAW 9
           R PTKAVQ+KTP E W
Sbjct: 611 RCPTKAVQDKTPIETW 626


>gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 401

 Score =  177 bits (449), Expect = 1e-51
 Identities = 83/136 (61%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDD++RM W+YF+ +K E F    +FK LVE+QSG  IK LR+DRG E+  + F +
Sbjct: 119 FILFIDDFSRMTWVYFIKEKSEVFGILKKFKTLVEKQSGKQIKVLRSDRGKEYTSHEFDK 178

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+  GI+++LTVS +PQQNGV+ERKNR ++EMARSMLK+KGLPN +WAE V TA+YILN
Sbjct: 179 FCEDEGIEQKLTVSYSPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEVVYTAVYILN 238

Query: 56  RSPTKAVQNKTPYEAW 9
           R PT+ VQ+KT  EAW
Sbjct: 239 RCPTRTVQDKTLIEAW 254


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  184 bits (468), Expect = 2e-51
 Identities = 87/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG +IKT+R+D GGEF    F++
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLK 608

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK+V  KTP EAW
Sbjct: 669 RSPTKSVSGKTPQEAW 684


>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 961

 Score =  184 bits (467), Expect = 3e-51
 Identities = 86/136 (63%), Positives = 108/136 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG  IK++R+DRGGEF    F++
Sbjct: 548 FLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLK 607

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP   WAEAV  A+Y+LN
Sbjct: 608 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLN 667

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPTK++  KTP EAW
Sbjct: 668 RSPTKSISGKTPQEAW 683


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1033

 Score =  184 bits (466), Expect = 4e-51
 Identities = 87/136 (63%), Positives = 107/136 (78%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LFIDD++R  W+YFL +K E F  F +FKA VE++SG LIK LR+DRGGEF    F +
Sbjct: 481 FLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQK 540

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YC+ NGI+R+LTV R+PQQNGVAERKNR I+EMARSMLK K LP  +WAEAV  A+Y+ N
Sbjct: 541 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTN 600

Query: 56  RSPTKAVQNKTPYEAW 9
           RSPT++V  KTP EAW
Sbjct: 601 RSPTRSVSGKTPQEAW 616


>gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 1063

 Score =  184 bits (466), Expect = 4e-51
 Identities = 90/137 (65%), Positives = 106/137 (77%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           F+LF+DD +R  W+YF+ QK EAFS FL FKA  E++ G  I+ LRTDRG EF  N F +
Sbjct: 333 FLLFVDDLSRKSWLYFIKQKSEAFSKFLIFKASAEKECGEPIQILRTDRGSEFCSNEFTK 392

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           +C+ NGIKR+LT S TPQQNGVAERKNR IVEMARSMLK K LP  +WAEAV T +++LN
Sbjct: 393 FCQLNGIKRQLTASYTPQQNGVAERKNRTIVEMARSMLKAKNLPISFWAEAVATTVHLLN 452

Query: 56  RSPTKAVQNKTPYEAWY 6
            SPTKAV N TPYEAWY
Sbjct: 453 ISPTKAVWNSTPYEAWY 469


>gb|PKA46730.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 1112

 Score =  184 bits (466), Expect = 4e-51
 Identities = 85/138 (61%), Positives = 110/138 (79%)
 Frame = -1

Query: 416 FILFIDDYTRMMWIYFLNQKLEAFSTFLQFKALVERQSGFLIKTLRTDRGGEFLYNPFIE 237
           FILFIDD++RM W++FL  K +A   F++F+A  E++ G+ IK LRTDRGGEFL + F  
Sbjct: 387 FILFIDDFSRMSWVFFLVHKSDALDKFIEFRAFAEKECGYPIKVLRTDRGGEFLSHDFNL 446

Query: 236 YCKANGIKRRLTVSRTPQQNGVAERKNRRIVEMARSMLKDKGLPNLYWAEAV*TALYILN 57
           YCK  GI+R+LTV +TP+QNG+AERKNR +VEMAR ML +K L N +WAEAV T++Y+LN
Sbjct: 447 YCKKYGIRRQLTVRKTPEQNGIAERKNRTVVEMARCMLHEKSLSNKFWAEAVATSVYLLN 506

Query: 56  RSPTKAVQNKTPYEAWYK 3
            SPTKAV N+TPYEAW+K
Sbjct: 507 ISPTKAVFNRTPYEAWWK 524