BLASTX nr result

ID: Rehmannia29_contig00025363 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025363
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073737.1| probable polygalacturonase [Sesamum indicum]...    62   5e-08
ref|XP_011101030.1| probable polygalacturonase [Sesamum indicum]       61   2e-07
ref|XP_022875561.1| probable polygalacturonase [Olea europaea va...    60   2e-07
ref|XP_022886960.1| probable polygalacturonase [Olea europaea va...    56   6e-06

>ref|XP_011073737.1| probable polygalacturonase [Sesamum indicum]
 ref|XP_011073743.1| probable polygalacturonase [Sesamum indicum]
 ref|XP_020552018.1| probable polygalacturonase [Sesamum indicum]
          Length = 449

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 33/50 (66%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 143 MLCFDL---LCIGVIVLISINSTSFANAEWVTCSGIVPMRYRNDKISITD 3
           M C D    +C G+IVL+ IN  + ANAE VTCSGIVPMRYR+DKISITD
Sbjct: 1   MSCLDFSIFVCFGIIVLL-INCLALANAEEVTCSGIVPMRYRDDKISITD 49


>ref|XP_011101030.1| probable polygalacturonase [Sesamum indicum]
          Length = 447

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/50 (70%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 143 MLCFD---LLCIGVIVLISINSTSFANAEWVTCSGIVPMRYRNDKISITD 3
           M CFD   LL IGVI+L+SIN   +ANAEW TCS IVPMR R DKISITD
Sbjct: 1   MHCFDYLILLRIGVILLLSIN---YANAEWETCSWIVPMRNRYDKISITD 47


>ref|XP_022875561.1| probable polygalacturonase [Olea europaea var. sylvestris]
          Length = 448

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 125 LCIGVIVLISINSTSFANAEWVTCSGIVPMRYRNDKISITD 3
           LC  V+ L+ IN ++FANAEW TC+GI P+RYRNDKISITD
Sbjct: 9   LCFLVMALL-INCSNFANAEWATCAGIAPVRYRNDKISITD 48


>ref|XP_022886960.1| probable polygalacturonase [Olea europaea var. sylvestris]
 ref|XP_022886961.1| probable polygalacturonase [Olea europaea var. sylvestris]
 ref|XP_022886962.1| probable polygalacturonase [Olea europaea var. sylvestris]
 ref|XP_022886963.1| probable polygalacturonase [Olea europaea var. sylvestris]
          Length = 449

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 134 FDLLCIGVIVLISINSTSFANAEWVTCSGIVPMRYRNDKISITD 3
           F +    V  L+ +N + FAN EWVTCSG+VPMR R+DKISITD
Sbjct: 6   FSIFLCFVAALLLMNCSVFANGEWVTCSGMVPMRDRDDKISITD 49


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