BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025298
         (628 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP49083.1| Copia protein, partial [Cajanus cajan]                 105   3e-37
gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposo...   127   3e-33
ref|XP_022856063.1| uncharacterized protein LOC111377235, partia...   129   5e-31
ref|XP_008778555.1| PREDICTED: uncharacterized protein LOC103698...   127   4e-30
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   125   1e-29
dbj|GAU36337.1| hypothetical protein TSUD_321760 [Trifolium subt...   125   2e-29
gb|KZV15509.1| hypothetical protein F511_38613 [Dorcoceras hygro...   125   2e-29
gb|KYP41111.1| Retrovirus-related Pol polyprotein from transposo...   123   2e-29
ref|XP_022866776.1| uncharacterized protein LOC111386548 [Olea e...   124   2e-29
gb|KZV19047.1| hypothetical protein F511_08475 [Dorcoceras hygro...   123   6e-29
gb|KYP69518.1| Retrovirus-related Pol polyprotein from transposo...   123   6e-29
ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509...   120   6e-29
gb|KZV39348.1| hypothetical protein F511_17540 [Dorcoceras hygro...   123   1e-28
gb|PKH48991.1| hypothetical protein CRG98_050339, partial [Punic...   123   1e-28
gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa]     123   1e-28
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   123   1e-28
gb|KYP60497.1| Retrovirus-related Pol polyprotein from transposo...   121   2e-28
gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposo...   117   2e-28
ref|XP_016690731.1| PREDICTED: uncharacterized protein LOC107907...   121   3e-28
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...   121   3e-28

>gb|KYP49083.1| Copia protein, partial [Cajanus cajan]
          Length = 245

 Score =  105 bits (262), Expect(2) = 3e-37
 Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
 Frame = +1

Query: 16  RMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNT-WHARLGHLSAKRLSMIDKFVVSK--- 183
           R IGS     G+Y L+  +       ++ D  T WHAR+GH SAK L  + + +      
Sbjct: 1   RTIGSGDLHDGVYVLKRTTQGTSLAVVRRDATTLWHARMGHPSAKTLQCLSRLLKCSFDF 60

Query: 184 DKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTLVDDHS 363
           +K   CD+CH +KQ +LPF      +   F ++HCD+WG + T SH G  YFLT+VDD +
Sbjct: 61  NKVDCCDICHKSKQCRLPFNQSDNKAMESFALIHCDLWGRYRTASHTGSHYFLTIVDDFT 120

Query: 364 RCTWIYLLRHKGR 402
             TW YLL+ K R
Sbjct: 121 CGTWAYLLKEKNR 133



 Score = 78.2 bits (191), Expect(2) = 3e-37
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = +3

Query: 405 KKQATISRSSAESEYRAIAFITCEIQWISYLLQDLQFQQTQPATVYTDSRSAYCISQNAC 584
           KKQ T+SRSS++ EYR++A  T EI W+  LL  LQ +   P T+Y D+++   ++ N  
Sbjct: 140 KKQTTVSRSSSKVEYRSMAHATSEILWLRNLLSCLQVKCDSPPTLYCDNQATLHLTTNPV 199

Query: 585 HHERTKHIQIDCHF 626
           +HE TKHI++DCHF
Sbjct: 200 YHETTKHIEVDCHF 213


>gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 191

 Score =  127 bits (319), Expect = 3e-33
 Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 12/154 (7%)
 Frame = +1

Query: 19  MIGSAKQEAGLYHL---------QFPSAAAVSTSLKIDVNTWHARLGHLSAKRLSMI-DK 168
           MIG A  + GLYHL          F S+A   T+   + N WH RLGHLS  RL+++ ++
Sbjct: 1   MIGLASLKQGLYHLVINKEGCLPTFSSSANSLTANTNNKNLWHLRLGHLSGSRLNLLHEQ 60

Query: 169 F-VVSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLT 345
           F  +SK   +TCD+CHL+KQ+K P+   T+ +  +FD++H DIWGPFS  S  G +YFLT
Sbjct: 61  FPFISKHINETCDICHLSKQKKFPYSISTSRATKMFDLIHMDIWGPFSKPSIYGHKYFLT 120

Query: 346 LVDDHSRCTWIYLLRHKGR-QRNRQQ*VDLLQNQ 444
           ++DD SR TWI LL+ K   Q + Q  + L++NQ
Sbjct: 121 ILDDFSRYTWIVLLKSKAEVQSHVQNFIALIENQ 154


>ref|XP_022856063.1| uncharacterized protein LOC111377235, partial [Olea europaea var.
           sylvestris]
          Length = 585

 Score =  129 bits (323), Expect = 5e-31
 Identities = 71/157 (45%), Positives = 95/157 (60%), Gaps = 23/157 (14%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQ------FPSAA--------AVSTSL---KIDVNTWHARL 129
           D  NQ+MIG  ++ AGLY +       FP+ +         VS S    K++ NTWH RL
Sbjct: 429 DTHNQKMIGKGRRSAGLYIISATALDSFPTHSRNLSIDKVCVSVSSVVNKVNANTWHHRL 488

Query: 130 GHLSAKRLSMID-----KFVVSKDKFQT-CDVCHLAKQRKLPFYSRTAYSDSIFDIVHCD 291
           GHLS K+L+ +      KF  SKD      +VC LAKQR+L F S   +S + FD+VHCD
Sbjct: 489 GHLSFKKLAPLKDSLGLKFDQSKDHNSIPSNVCPLAKQRRLSFVSNNHFSANAFDLVHCD 548

Query: 292 IWGPFSTTSHNGFRYFLTLVDDHSRCTWIYLLRHKGR 402
            WGP+   SH+G RYFLTLV+D +R TW+YL++HK +
Sbjct: 549 TWGPYHVASHSGHRYFLTLVNDSTRFTWVYLMKHKSK 585


>ref|XP_008778555.1| PREDICTED: uncharacterized protein LOC103698337 [Phoenix
           dactylifera]
          Length = 848

 Score =  127 bits (318), Expect = 4e-30
 Identities = 70/160 (43%), Positives = 96/160 (60%), Gaps = 23/160 (14%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQF---------------------PSAAAVSTSLKIDVNTW 117
           DL N R I   K E GLYHLQ                       S++AV +S + D+  W
Sbjct: 354 DLLNWRTIRMGKLEDGLYHLQLNEIQTTTGTLNSSLSKSSSPLSSSSAVVSSHEFDL--W 411

Query: 118 HARLGHLSAKRLSMIDKFV--VSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCD 291
           H RLGHLS   LS+++K V  ++      C +C +AKQR+L F S    + SIF+++HCD
Sbjct: 412 HCRLGHLSFPHLSILNKSVPEINICLNSHCSICPIAKQRRLNFSSSDHVTSSIFELIHCD 471

Query: 292 IWGPFSTTSHNGFRYFLTLVDDHSRCTWIYLLRHKGRQRN 411
           IWGPFSTTS +G +YFLT+VDD+SR TW+YL++ K + R+
Sbjct: 472 IWGPFSTTSLDGSKYFLTIVDDYSRATWVYLMQSKAQTRD 511


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1115

 Score =  125 bits (315), Expect = 1e-29
 Identities = 64/156 (41%), Positives = 95/156 (60%), Gaps = 8/156 (5%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKI-----DVNTWHARLGHLSAKRLSMID 165
           D+   +MIGSA  + GL+HL        ST+        + N WH RLGHLS+ RL++++
Sbjct: 153 DMNTLKMIGSANLKEGLFHLDIGKERRSSTNNATATPINNSNLWHFRLGHLSSNRLNVLN 212

Query: 166 KFV--VSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYF 339
           +    +SK   + CDVCH AKQ+KL +   ++    IFD++H DIWGPFS  S +G +YF
Sbjct: 213 QQFPFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYF 272

Query: 340 LTLVDDHSRCTWIYLLRHKGRQRNR-QQ*VDLLQNQ 444
           LT++DD SR TW+ LL+ K   +      ++L++NQ
Sbjct: 273 LTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQ 308



 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +3

Query: 399  KAKKQATISRSSAESEYRAIAFITCEIQWISYLLQDLQFQQTQPATVYTDSRSAYCISQN 578
            K KKQ T+SRSS+E+EYRA+A  TCE+QWI YLL+DL    +Q + +Y D+ SA  I+ N
Sbjct: 973  KTKKQTTVSRSSSEAEYRALASATCELQWIIYLLRDLHISLSQISLLYCDNTSALHIAAN 1032

Query: 579  ACHHERTKHIQIDCH 623
               HERTKH+ IDCH
Sbjct: 1033 PVFHERTKHLDIDCH 1047


>dbj|GAU36337.1| hypothetical protein TSUD_321760 [Trifolium subterraneum]
          Length = 1094

 Score =  125 bits (314), Expect = 2e-29
 Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 9/139 (6%)
 Frame = +1

Query: 7   ENQRMIGSAKQEAGLYHL------QFPSAAAVSTSLKIDVNTWHARLGHLSAKRLSMIDK 168
           +N R IG AKQ  GLY L      Q  S  ++ TS       WH RLGHLS +R+  ++K
Sbjct: 432 DNMRKIGLAKQSDGLYFLKPCQVSQSISVHSIDTSSNNSGLLWHLRLGHLSFERIKCLNK 491

Query: 169 ---FVVSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYF 339
              ++ + D    CDVCH+AKQ++LPF    + + S FD++H DIWGPFST S +GF+YF
Sbjct: 492 RYSYIPALDH-NPCDVCHMAKQKRLPFPVSNSNATSSFDLIHADIWGPFSTVSVHGFKYF 550

Query: 340 LTLVDDHSRCTWIYLLRHK 396
           LT++DDHSR  W+ +L+ K
Sbjct: 551 LTILDDHSRYLWVIMLKTK 569



 Score = 87.0 bits (214), Expect = 3e-16
 Identities = 42/75 (56%), Positives = 54/75 (72%)
 Frame = +3

Query: 399  KAKKQATISRSSAESEYRAIAFITCEIQWISYLLQDLQFQQTQPATVYTDSRSAYCISQN 578
            K+KKQ T+S SSAE+EYRA+A  T E+QW+S+LLQDL     +   +Y DS+SA  I+ N
Sbjct: 913  KSKKQTTVSCSSAEAEYRALAAATRELQWLSFLLQDLVQSCVRQPVLYCDSQSAMHIAAN 972

Query: 579  ACHHERTKHIQIDCH 623
               HERTKH+ IDCH
Sbjct: 973  PVFHERTKHLDIDCH 987


>gb|KZV15509.1| hypothetical protein F511_38613 [Dorcoceras hygrometricum]
          Length = 693

 Score =  125 bits (313), Expect = 2e-29
 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 6/137 (4%)
 Frame = +1

Query: 4   LENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNT--WHARLGHLSAKRLSMIDKFVV 177
           L   R IG+ ++   LY L  PS+  +     +   T  WH RLGH+S  RLS++   + 
Sbjct: 482 LNQARTIGTGRRVGDLYILNSPSSPRMKVCATVHSKTQLWHYRLGHISLPRLSILGDVIQ 541

Query: 178 ----SKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLT 345
               + +    C++CHL+KQ++LPF S     DS FD+VH DIWGPF+  + +GF+YFLT
Sbjct: 542 ESFSNNEALSACEICHLSKQKRLPFISNNTVVDSCFDLVHIDIWGPFNPMNVDGFKYFLT 601

Query: 346 LVDDHSRCTWIYLLRHK 396
           +VDDHSR TW+ LL+ K
Sbjct: 602 IVDDHSRYTWVQLLKSK 618


>gb|KYP41111.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 476

 Score =  123 bits (309), Expect = 2e-29
 Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFP----SAAAVSTSLKIDVNTWHARLGHLSAKRLSMI-D 165
           DL+  R IG+ KQ+ GL   +FP    ++  +S    +   TWH RLGH+      +I +
Sbjct: 111 DLKTLRTIGTTKQQQGLLVFEFPKRNFNSDCISNCNSVTYETWHKRLGHIPISVYKLIAN 170

Query: 166 KFVVSK-DKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFL 342
           K  +S  D    C  C++AKQ +LPF +   +S S FD++H DIWGPF   +++GFRYFL
Sbjct: 171 KIKLSSIDSTYHCSTCNIAKQNRLPFPNPNKFSPSCFDLIHADIWGPFKQPTYDGFRYFL 230

Query: 343 TLVDDHSRCTWIYLLRHK 396
           TLVDD SR TWIY+L++K
Sbjct: 231 TLVDDKSRFTWIYMLQNK 248


>ref|XP_022866776.1| uncharacterized protein LOC111386548 [Olea europaea var.
           sylvestris]
          Length = 529

 Score =  124 bits (310), Expect = 2e-29
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYH----------LQFPSAAAVSTSLKIDVNTWHARLGHLSAKR 150
           DL + +M   AK++ GLYH          L   S      S + + N WH R+GH+S+ R
Sbjct: 302 DLASMKMTSFAKEKDGLYHCMIAPDTTEPLPVTSNPTARVSTQFNYNIWHCRIGHISSTR 361

Query: 151 LSMID--KFVVSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHN 324
           +S I      +  +    C++C LAKQ KLPF      S+ IFD+VHCDIWGPF   S N
Sbjct: 362 MSKIPCISSYIPCNNLHKCEICPLAKQEKLPFPISNLVSNKIFDLVHCDIWGPFHVPSFN 421

Query: 325 GFRYFLTLVDDHSRCTWIYLLRHK 396
           G+R+  T+VDD+SRCTW+++++ K
Sbjct: 422 GYRFSPTIVDDYSRCTWVFMMQSK 445


>gb|KZV19047.1| hypothetical protein F511_08475 [Dorcoceras hygrometricum]
          Length = 594

 Score =  123 bits (308), Expect = 6e-29
 Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 6/137 (4%)
 Frame = +1

Query: 4   LENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNT--WHARLGHLSAKRLSMIDKFVV 177
           L   R IG+ ++   LY L  P ++ +     +   T  WH RLGH+S  RLS++   + 
Sbjct: 383 LNQARTIGTGRRIGDLYLLTSPPSSRMEVCATVHSKTQLWHYRLGHISLPRLSILGDVIQ 442

Query: 178 ----SKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLT 345
               + +    C++CHL+KQ++LPF S     DS FD+VH DIWGPF+  + +GF+YFLT
Sbjct: 443 ESFSNNEALSACEICHLSKQKRLPFISNNTVVDSCFDLVHIDIWGPFNPMNVDGFKYFLT 502

Query: 346 LVDDHSRCTWIYLLRHK 396
           +VDDHSR TW+ LL+ K
Sbjct: 503 IVDDHSRYTWVQLLKSK 519


>gb|KYP69518.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 731

 Score =  123 bits (309), Expect = 6e-29
 Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFP----SAAAVSTSLKIDVNTWHARLGHLSAKRLSMI-D 165
           DL+  R IG+ KQ+ GL   +FP    ++  +S    +   TWH RLGH+      +I +
Sbjct: 102 DLKTLRTIGTTKQQQGLLVFEFPKRNFNSDCISNCNSVTYETWHKRLGHIPISVYKLIAN 161

Query: 166 KFVVSK-DKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFL 342
           K  +S  D    C  C++AKQ +LPF +   +S S FD++H DIWGPF   +++GFRYFL
Sbjct: 162 KIKLSSIDSTYHCSTCNIAKQNRLPFPNPNKFSPSCFDLIHADIWGPFKQPTYDGFRYFL 221

Query: 343 TLVDDHSRCTWIYLLRHK 396
           TLVDD SR TWIY+L++K
Sbjct: 222 TLVDDKSRFTWIYMLQNK 239


>ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509950 [Cicer arietinum]
          Length = 370

 Score =  120 bits (301), Expect = 6e-29
 Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
 Frame = +1

Query: 16  RMIGSAKQEAGLYHLQFPSA--------AAVSTSLKIDVNTWHARLGHLSAKRLSMIDKF 171
           +MIG AK   GLYHLQ P          +  S S  +  + WH RLGH S   L+ I K 
Sbjct: 198 KMIGHAKLFNGLYHLQQPINDVKYCVLYSLNSRSSHVTFDLWHLRLGHPSNNVLTHICKH 257

Query: 172 V--VSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLT 345
              VS + ++ CD C+LAKQ +LPF +    SD+ FD++H DIWGP S +S +G +YFLT
Sbjct: 258 FPYVSFNSYKICDSCYLAKQSRLPFNASNTISDNAFDLIHMDIWGPLSHSSIHGHKYFLT 317

Query: 346 LVDDHSRCTWIYLLRHK-GRQRNRQQ*VDLLQNQNIEQLLSLLVKYNGYHI 495
           +VDD +R TWIYL++ K   Q+     V L++NQ  ++++ ++  +NG  +
Sbjct: 318 IVDDCTRHTWIYLMKAKFETQKLMHDFVVLVENQ-FDKVIKVIRTHNGVEL 367


>gb|KZV39348.1| hypothetical protein F511_17540 [Dorcoceras hygrometricum]
          Length = 1025

 Score =  123 bits (308), Expect = 1e-28
 Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 6/137 (4%)
 Frame = +1

Query: 4   LENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNT--WHARLGHLSAKRLSMIDKFVV 177
           L   R IG+ ++   LY L  P ++ +     +   T  WH RLGH+S  RLS++   + 
Sbjct: 383 LNQARTIGTGRRIGDLYLLTSPPSSRMEVCATVHSKTQLWHYRLGHISLPRLSILGDVIQ 442

Query: 178 ----SKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLT 345
               + +    C++CHL+KQ++LPF S     DS FD+VH DIWGPF+  + +GF+YFLT
Sbjct: 443 ESFSNNEALSACEICHLSKQKRLPFISNNTVVDSCFDLVHIDIWGPFNPMNVDGFKYFLT 502

Query: 346 LVDDHSRCTWIYLLRHK 396
           +VDDHSR TW+ LL+ K
Sbjct: 503 IVDDHSRYTWVQLLKSK 519


>gb|PKH48991.1| hypothetical protein CRG98_050339, partial [Punica granatum]
          Length = 1053

 Score =  123 bits (308), Expect = 1e-28
 Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSA--AAVSTSLKIDVNTWHARLGHLSAKRLSMIDKFV 174
           DL  +R IG A+   GLY     ++  A V+  L+ +   WH RLGH S   LS++  F 
Sbjct: 267 DLAVRRPIGVARLRGGLYCFGCITSFSAFVAKGLE-NQERWHRRLGHPSYNVLSLVPAFG 325

Query: 175 VSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTLVD 354
           +++ + +TCD+C  AKQ + PF      S++IFD++HCDIWGP+ T S +G  YFLT+VD
Sbjct: 326 ITEVENKTCDICFRAKQTRFPFPPSINKSENIFDLIHCDIWGPYHTASLSGAHYFLTIVD 385

Query: 355 DHSRCTWIYLLRHKGRQRNR 414
           DHSR TW+YL+R K     R
Sbjct: 386 DHSRATWVYLMREKSETMKR 405


>gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa]
          Length = 1291

 Score =  123 bits (308), Expect = 1e-28
 Identities = 58/132 (43%), Positives = 84/132 (63%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNTWHARLGHLSAKRLSMIDKFVVS 180
           DL ++++IG  + + GLY ++   A+  + ++K+D   WH RLGH S  RL  I  F+ S
Sbjct: 265 DLHSRKLIGMGRCKDGLYKMEEMDASIKAMAVKVDAEIWHRRLGHASNSRLQHIS-FLNS 323

Query: 181 KDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTLVDDH 360
             +   CD C  AKQ +LPF      + + FD++HCDIWG +   S +G RYFLT+VDD+
Sbjct: 324 LGETDHCDSCIKAKQTRLPFKDSFIKTSAPFDLIHCDIWGGYRVPSLSGARYFLTIVDDY 383

Query: 361 SRCTWIYLLRHK 396
           SR TW+YLL+HK
Sbjct: 384 SRSTWVYLLKHK 395


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  123 bits (308), Expect = 1e-28
 Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNTWHARLGHLSAKRLSMI-DKFVV 177
           DL   RM+G  ++ A LY L     + +S +  +D++ WH RLGH S +RL  I D    
Sbjct: 521 DLIKGRMLGQGRRVANLYLLDVGDQS-ISVNAVVDISMWHRRLGHASLQRLDAISDSLGT 579

Query: 178 SKDKFQT---CDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTL 348
           ++ K +    C VCHLAKQRKL F +       IFD++H D+WGPFS  +  G++YFLT+
Sbjct: 580 TRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTI 639

Query: 349 VDDHSRCTWIYLLRHK 396
           VDDHSR TW+YLL+ K
Sbjct: 640 VDDHSRATWMYLLKTK 655



 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 40/75 (53%), Positives = 53/75 (70%)
 Frame = +3

Query: 399  KAKKQATISRSSAESEYRAIAFITCEIQWISYLLQDLQFQQTQPATVYTDSRSAYCISQN 578
            ++KKQ T+SRSSAE+EYRA+A  TCE+ W+  LL  LQ     P  +Y+DS +A  I+ N
Sbjct: 1329 RSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVP-ILYSDSTAAIYIATN 1387

Query: 579  ACHHERTKHIQIDCH 623
               HERTKHI++DCH
Sbjct: 1388 PVFHERTKHIKLDCH 1402


>gb|KYP60497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 553

 Score =  121 bits (304), Expect = 2e-28
 Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSAAAVSTSLK----IDVNTWHARLGHL--SAKRLSMI 162
           DL+  R IG+AKQ+  L   +FP+    S  +     +  +TWH RLGH+  S  RL   
Sbjct: 402 DLKTLRKIGTAKQQQRLLVFEFPTCTFPSNCINSCNVVTYDTWHKRLGHVPKSVYRLITN 461

Query: 163 DKFVVSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFL 342
              + S D    C +C++AKQ +LPF +   +S + FD++H DIWGPF   +++GFRYFL
Sbjct: 462 KTDLSSIDSSYHCSICNIAKQNRLPFSNPNKFSPNCFDLIHADIWGPFRQPTYDGFRYFL 521

Query: 343 TLVDDHSRCTWIYLLRHK 396
           TLVDD SR TW+Y+L +K
Sbjct: 522 TLVDDKSRFTWVYMLHNK 539


>gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 301

 Score =  117 bits (294), Expect = 2e-28
 Identities = 64/152 (42%), Positives = 92/152 (60%), Gaps = 11/152 (7%)
 Frame = +1

Query: 22  IGSAKQEAGLY-----HLQFPSAAAVSTSLK---IDVNTWHARLGHLSAKRLSMIDK--F 171
           IGS     GLY     HLQ  S  +     K   I ++ WH RLGHLS++R+ ++ +   
Sbjct: 3   IGSVDVRDGLYQLIPVHLQPHSINSTIIHPKCNVIPIDLWHFRLGHLSSERMHIMQQQYS 62

Query: 172 VVSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTLV 351
            ++ +K   C+ CH AKQRKLPF    +++   F ++H DIWGP+ST S NG RYFLT+V
Sbjct: 63  CLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFALIHMDIWGPYSTLSMNGHRYFLTIV 122

Query: 352 DDHSRCTWIYLLRHKGRQRNR-QQ*VDLLQNQ 444
           DDH+R TW+YL+ +K   R      ++L++NQ
Sbjct: 123 DDHTRYTWVYLMCNKSETRTHITNFINLVENQ 154


>ref|XP_016690731.1| PREDICTED: uncharacterized protein LOC107907947 [Gossypium
           hirsutum]
          Length = 667

 Score =  121 bits (304), Expect = 3e-28
 Identities = 69/169 (40%), Positives = 93/169 (55%), Gaps = 8/169 (4%)
 Frame = +1

Query: 4   LENQRMIGSAKQEAGLYHLQFPSAA-AVSTSLKIDVNT-----WHARLGHLSAKRLSMID 165
           L + +MIG A+   GLY L  P+   ++ST + +  NT     WH RLGHLS  RL ++ 
Sbjct: 341 LPSLKMIGIARVLHGLYILDSPAQTFSISTPIALSANTTSCSLWHHRLGHLSDSRLKLLF 400

Query: 166 KFV--VSKDKFQTCDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYF 339
            ++  +S     TC  CHLAKQ+K+ F   T+ S+ IF++VH DIWGP    S  G RYF
Sbjct: 401 PYIPSLSMSNNATCKACHLAKQKKISFSVSTSVSNKIFELVHVDIWGPTDVISITGHRYF 460

Query: 340 LTLVDDHSRCTWIYLLRHKGRQRNRQQ*VDLLQNQNIEQLLSLLVKYNG 486
           LT+VDD SR TWI LL+ K   R   Q    L        + ++   NG
Sbjct: 461 LTIVDDFSRFTWIILLKAKSEVRTHIQNFFTLVETQFSSKIKVIRSNNG 509


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  121 bits (304), Expect = 3e-28
 Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   DLENQRMIGSAKQEAGLYHLQFPSAAAVSTSLKIDVNTWHARLGHLSAKRLSMIDKFV-V 177
           DL   RM+G  ++ A LY +       VS +  +D++TWH RL H S +RL +I + +  
Sbjct: 380 DLIKGRMLGHGRRVANLYVMDVEDTN-VSVNAVVDISTWHNRLRHASLQRLDVISESLGT 438

Query: 178 SKDKFQT---CDVCHLAKQRKLPFYSRTAYSDSIFDIVHCDIWGPFSTTSHNGFRYFLTL 348
           +K K +    C VCHLAK RKL F S+    + IF+++H DIWGPFS  + +G++YFLT+
Sbjct: 439 TKHKNKGSDYCHVCHLAKHRKLSFPSQNNVCNEIFEMLHIDIWGPFSVETVDGYQYFLTI 498

Query: 349 VDDHSRCTWIYLLRHK 396
           VDDHSR TWIYLL+ K
Sbjct: 499 VDDHSRATWIYLLKTK 514



 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = +3

Query: 399  KAKKQATISRSSAESEYRAIAFITCEIQWISYLLQDLQFQQTQPATVYTDSRSAYCISQN 578
            ++KKQ  +SRSSAE+EYRA+A  TCE+ W+  LL  L    T P  +++DS +A  I+ N
Sbjct: 1139 RSKKQHVVSRSSAEAEYRALALATCELVWLHTLLASLTAATTIP-ILFSDSTAAIYIAIN 1197

Query: 579  ACHHERTKHIQIDCH 623
               HERTKHI+IDCH
Sbjct: 1198 PVFHERTKHIEIDCH 1212