BLASTX nr result

ID: Rehmannia29_contig00025254 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025254
         (778 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN16845.1| Mediator of U snRNA nuclear export PHAX [Handroan...    57   6e-06
ref|XP_022892727.1| uncharacterized protein LOC111407467 isoform...    55   9e-06

>gb|PIN16845.1| Mediator of U snRNA nuclear export PHAX [Handroanthus
           impetiginosus]
          Length = 257

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -2

Query: 78  VDAIQACGGQKTADGGRFRNGGGILW 1
           VDAIQACGGQKTADG RFRNGGGILW
Sbjct: 125 VDAIQACGGQKTADGRRFRNGGGILW 150


>ref|XP_022892727.1| uncharacterized protein LOC111407467 isoform X2 [Olea europaea var.
           sylvestris]
 ref|XP_022892728.1| uncharacterized protein LOC111407467 isoform X2 [Olea europaea var.
           sylvestris]
          Length = 159

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -2

Query: 78  VDAIQACGGQKTADGGRFRNGGGILW 1
           VDAIQACGGQKTADG RFR+GGGILW
Sbjct: 100 VDAIQACGGQKTADGRRFRSGGGILW 125


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