BLASTX nr result

ID: Rehmannia29_contig00025212 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025212
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKV71955.1| R2R3-MYB protein [Rehmannia glutinosa]                 114   1e-27
gb|PIN26084.1| Transcription factor, Myb superfamily [Handroanth...    80   1e-14
ref|XP_011070788.1| transcription factor MYB62 [Sesamum indicum]       73   4e-12
ref|XP_011076599.1| transcription factor MYB62 [Sesamum indicum]       69   2e-10
gb|PIN01348.1| Transcription factor, Myb superfamily [Handroanth...    65   3e-09
gb|AKV71956.1| R2R3-MYB protein [Rehmannia glutinosa]                  64   9e-09

>gb|AKV71955.1| R2R3-MYB protein [Rehmannia glutinosa]
          Length = 286

 Score =  114 bits (286), Expect = 1e-27
 Identities = 52/53 (98%), Positives = 52/53 (98%)
 Frame = +1

Query: 1   DNIPSYDMQELEYQDILLSGRHVAENDWFEDLGSAFWNTDELWQFRKPEEVGV 159
           DNIPSYDMQELEYQDILLSGR VAENDWFEDLGSAFWNTDELWQFRKPEEVGV
Sbjct: 234 DNIPSYDMQELEYQDILLSGRQVAENDWFEDLGSAFWNTDELWQFRKPEEVGV 286


>gb|PIN26084.1| Transcription factor, Myb superfamily [Handroanthus impetiginosus]
          Length = 281

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
 Frame = +1

Query: 4   NIPSYD-MQELEYQDILLSGRHVAENDWF-EDLGSAFWNTDELWQFRKPEEVGV 159
           +IP+YD MQELE QDI +S R VAE DWF EDLGS FWNTDELW FRK EE+GV
Sbjct: 228 DIPTYDNMQELESQDISISDRQVAEVDWFGEDLGSTFWNTDELWHFRKLEEIGV 281


>ref|XP_011070788.1| transcription factor MYB62 [Sesamum indicum]
          Length = 283

 Score = 73.2 bits (178), Expect = 4e-12
 Identities = 37/50 (74%), Positives = 37/50 (74%)
 Frame = +1

Query: 10  PSYDMQELEYQDILLSGRHVAENDWFEDLGSAFWNTDELWQFRKPEEVGV 159
           PSYDMQELE QDI LS  HVAE DW       FWNTDELWQFRKP EVGV
Sbjct: 237 PSYDMQELEAQDISLSECHVAEIDW-------FWNTDELWQFRKPGEVGV 279


>ref|XP_011076599.1| transcription factor MYB62 [Sesamum indicum]
          Length = 303

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 37/55 (67%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   DNIPSYDMQELEYQDILLSGRHVAENDWF-EDLGSAFWNTDELWQFRKPE-EVGV 159
           D IPSYDMQE       LS  HVAE DWF EDLGS FW TD+LWQFRK E +VGV
Sbjct: 249 DMIPSYDMQEFSQDIPDLSECHVAEVDWFGEDLGSTFWETDDLWQFRKGEDQVGV 303


>gb|PIN01348.1| Transcription factor, Myb superfamily [Handroanthus impetiginosus]
          Length = 295

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 33/47 (70%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
 Frame = +1

Query: 7   IPSYDMQELEYQDILLSGRHVAENDWF-EDLGSA-FWNTDELWQFRK 141
           IP+YD+QELE Q + L   HV+E DWF EDLGS+ FWNTDELWQFRK
Sbjct: 236 IPTYDLQELEPQVMSLGECHVSEIDWFGEDLGSSTFWNTDELWQFRK 282


>gb|AKV71956.1| R2R3-MYB protein [Rehmannia glutinosa]
          Length = 288

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +1

Query: 16  YDMQELEYQDILLSGRHVAENDWF-EDLGSAFWNTDELWQFRKPEEVGV 159
           Y+MQEL  QDI +S  HV   DW  EDL S FWN+DELW+FRKPE+ G+
Sbjct: 240 YEMQELVGQDISMSECHVEGMDWLGEDLRSTFWNSDELWEFRKPEDFGL 288


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