BLASTX nr result

ID: Rehmannia29_contig00025055 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00025055
         (635 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPD71809.1| hypothetical protein GOBAR_DD31290 [Gossypium bar...    57   7e-06

>gb|PPD71809.1| hypothetical protein GOBAR_DD31290 [Gossypium barbadense]
          Length = 391

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = -1

Query: 155 CKEFTLMDKNLNAGHVRPS--IHFILDTISFSWAPNMLYCDISSFQPMEIYVD 3
           CK+F      L +   R +  IHF LD+I     PNM+YCDISSFQPMEIYVD
Sbjct: 157 CKKFMQDANGLESQFKRSASKIHFALDSICLKKLPNMIYCDISSFQPMEIYVD 209


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