BLASTX nr result
ID: Rehmannia29_contig00025046
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00025046
(411 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011082656.1| ubiquitin receptor RAD23b isoform X1 [Sesamu... 118 4e-29
gb|PIN14386.1| Nucleotide excision repair factor NEF2, RAD23 com... 117 5e-29
gb|KDO46128.1| hypothetical protein CISIN_1g0198172mg, partial [... 109 7e-29
gb|KJB69954.1| hypothetical protein B456_011G053200 [Gossypium r... 116 9e-29
ref|XP_017649859.1| PREDICTED: ubiquitin receptor RAD23b-like [G... 116 1e-28
gb|PPD99673.1| hypothetical protein GOBAR_DD03313 [Gossypium bar... 116 2e-28
ref|XP_016697955.1| PREDICTED: ubiquitin receptor RAD23b-like [G... 116 2e-28
ref|XP_012456581.1| PREDICTED: ubiquitin receptor RAD23b-like is... 116 2e-28
gb|KZV57917.1| Rad23 UV excision repair protein family isoform 1... 114 5e-28
gb|KJB34921.1| hypothetical protein B456_006G091100 [Gossypium r... 114 6e-28
gb|PON68282.1| UV excision repair protein Rad [Trema orientalis] 108 6e-28
gb|PON52756.1| UV excision repair protein Rad [Parasponia anders... 108 6e-28
gb|PPS09796.1| hypothetical protein GOBAR_AA10848 [Gossypium bar... 114 2e-27
gb|PPD70607.1| hypothetical protein GOBAR_DD32508 [Gossypium bar... 114 2e-27
ref|XP_016668816.1| PREDICTED: ubiquitin receptor RAD23b-like [G... 114 2e-27
ref|XP_012484759.1| PREDICTED: ubiquitin receptor RAD23b-like [G... 114 2e-27
ref|XP_017608409.1| PREDICTED: ubiquitin receptor RAD23b-like [G... 114 2e-27
ref|XP_022885676.1| ubiquitin receptor RAD23b-like [Olea europae... 114 2e-27
ref|XP_010246571.1| PREDICTED: ubiquitin receptor RAD23b-like [N... 113 3e-27
ref|XP_022715400.1| ubiquitin receptor RAD23b-like isoform X3 [D... 113 3e-27
>ref|XP_011082656.1| ubiquitin receptor RAD23b isoform X1 [Sesamum indicum]
Length = 361
Score = 118 bits (295), Expect = 4e-29
Identities = 58/61 (95%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHAVSVTPAEQEAIERMEAMGFDR LVIEAFLACDRNEELAVNYLLEN GD E
Sbjct: 301 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEELAVNYLLENAGDFE 360
Query: 181 D 183
D
Sbjct: 361 D 361
>gb|PIN14386.1| Nucleotide excision repair factor NEF2, RAD23 component
[Handroanthus impetiginosus]
gb|PIN17995.1| Nucleotide excision repair factor NEF2, RAD23 component
[Handroanthus impetiginosus]
Length = 360
Score = 117 bits (294), Expect = 5e-29
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQ+MPHAVSVTPAEQEAIERMEAMGFDR LVIEAFLACDRNEELAVNYLLEN GD+E
Sbjct: 300 DQAEQDMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEELAVNYLLENAGDLE 359
Query: 181 D 183
D
Sbjct: 360 D 360
>gb|KDO46128.1| hypothetical protein CISIN_1g0198172mg, partial [Citrus sinensis]
Length = 75
Score = 109 bits (273), Expect = 7e-29
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQ EQ+MPHA++VTPAEQEAI+R+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 15 DQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFE 74
Query: 181 D 183
D
Sbjct: 75 D 75
>gb|KJB69954.1| hypothetical protein B456_011G053200 [Gossypium raimondii]
Length = 317
Score = 116 bits (290), Expect = 9e-29
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLENGGD E
Sbjct: 257 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDFE 316
Query: 181 D 183
D
Sbjct: 317 D 317
>ref|XP_017649859.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium arboreum]
ref|XP_017649860.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium arboreum]
gb|KHG09850.1| Putative DNA repair RAD23-1 -like protein [Gossypium arboreum]
Length = 362
Score = 116 bits (291), Expect = 1e-28
Identities = 56/61 (91%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHAV+VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLENGGD E
Sbjct: 302 DQAEQEMPHAVNVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDFE 361
Query: 181 D 183
D
Sbjct: 362 D 362
>gb|PPD99673.1| hypothetical protein GOBAR_DD03313 [Gossypium barbadense]
Length = 359
Score = 116 bits (290), Expect = 2e-28
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLENGGD E
Sbjct: 299 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDFE 358
Query: 181 D 183
D
Sbjct: 359 D 359
>ref|XP_016697955.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium hirsutum]
Length = 362
Score = 116 bits (290), Expect = 2e-28
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLENGGD E
Sbjct: 302 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDFE 361
Query: 181 D 183
D
Sbjct: 362 D 362
>ref|XP_012456581.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Gossypium
raimondii]
gb|KJB69952.1| hypothetical protein B456_011G053200 [Gossypium raimondii]
gb|KJB69955.1| hypothetical protein B456_011G053200 [Gossypium raimondii]
Length = 362
Score = 116 bits (290), Expect = 2e-28
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLENGGD E
Sbjct: 302 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDFE 361
Query: 181 D 183
D
Sbjct: 362 D 362
>gb|KZV57917.1| Rad23 UV excision repair protein family isoform 1 [Dorcoceras
hygrometricum]
Length = 321
Score = 114 bits (285), Expect = 5e-28
Identities = 56/61 (91%), Positives = 56/61 (91%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQ EQEMPHAVSVTPAEQEAIERMEAMGFDR VIEAFLACDRNEELAVNYLLEN GD E
Sbjct: 261 DQGEQEMPHAVSVTPAEQEAIERMEAMGFDRASVIEAFLACDRNEELAVNYLLENSGDFE 320
Query: 181 D 183
D
Sbjct: 321 D 321
>gb|KJB34921.1| hypothetical protein B456_006G091100 [Gossypium raimondii]
Length = 305
Score = 114 bits (284), Expect = 6e-28
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 245 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 304
Query: 181 D 183
D
Sbjct: 305 D 305
>gb|PON68282.1| UV excision repair protein Rad [Trema orientalis]
Length = 100
Score = 108 bits (269), Expect = 6e-28
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQ EQ+MPHA++VTPAEQEAIER+EAMGF+R LVIEAFLACDRNE+LA NYLLEN GD E
Sbjct: 40 DQPEQDMPHAINVTPAEQEAIERLEAMGFERALVIEAFLACDRNEQLAANYLLENAGDFE 99
Query: 181 D 183
D
Sbjct: 100 D 100
>gb|PON52756.1| UV excision repair protein Rad [Parasponia andersonii]
Length = 100
Score = 108 bits (269), Expect = 6e-28
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQ EQ+MPHA++VTPAEQEAIER+EAMGF+R LVIEAFLACDRNE+LA NYLLEN GD E
Sbjct: 40 DQPEQDMPHAINVTPAEQEAIERLEAMGFERALVIEAFLACDRNEQLAANYLLENAGDFE 99
Query: 181 D 183
D
Sbjct: 100 D 100
>gb|PPS09796.1| hypothetical protein GOBAR_AA10848 [Gossypium barbadense]
Length = 373
Score = 114 bits (284), Expect = 2e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 313 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 372
Query: 181 D 183
D
Sbjct: 373 D 373
>gb|PPD70607.1| hypothetical protein GOBAR_DD32508 [Gossypium barbadense]
Length = 373
Score = 114 bits (284), Expect = 2e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 313 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 372
Query: 181 D 183
D
Sbjct: 373 D 373
>ref|XP_016668816.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium hirsutum]
Length = 373
Score = 114 bits (284), Expect = 2e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 313 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 372
Query: 181 D 183
D
Sbjct: 373 D 373
>ref|XP_012484759.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
ref|XP_016672136.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium hirsutum]
gb|KJB34920.1| hypothetical protein B456_006G091100 [Gossypium raimondii]
Length = 373
Score = 114 bits (284), Expect = 2e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 313 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 372
Query: 181 D 183
D
Sbjct: 373 D 373
>ref|XP_017608409.1| PREDICTED: ubiquitin receptor RAD23b-like [Gossypium arboreum]
gb|KHG13236.1| Putative DNA repair RAD23-1 -like protein [Gossypium arboreum]
Length = 373
Score = 114 bits (284), Expect = 2e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQEMPHA++VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 313 DQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 372
Query: 181 D 183
D
Sbjct: 373 D 373
>ref|XP_022885676.1| ubiquitin receptor RAD23b-like [Olea europaea var. sylvestris]
Length = 390
Score = 114 bits (284), Expect = 2e-27
Identities = 55/61 (90%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
D+ EQ+MPHAVSVTPAEQEAIERMEAMGFDR LVIEAFLACDRNEELAVNYLLEN GD E
Sbjct: 330 DEPEQDMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEELAVNYLLENAGDFE 389
Query: 181 D 183
D
Sbjct: 390 D 390
>ref|XP_010246571.1| PREDICTED: ubiquitin receptor RAD23b-like [Nelumbo nucifera]
Length = 378
Score = 113 bits (283), Expect = 3e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQ EQ+MPHA+SVTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELAVNYLLEN GD E
Sbjct: 318 DQPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLENAGDFE 377
Query: 181 D 183
D
Sbjct: 378 D 378
>ref|XP_022715400.1| ubiquitin receptor RAD23b-like isoform X3 [Durio zibethinus]
Length = 358
Score = 113 bits (282), Expect = 3e-27
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 1 DQAEQEMPHAVSVTPAEQEAIERMEAMGFDRVLVIEAFLACDRNEELAVNYLLENGGDME 180
DQAEQ+MPHAV+VTPAEQEAIER+EAMGFDR LVIEAFLACDRNEELA NYLLEN GD E
Sbjct: 298 DQAEQDMPHAVNVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFE 357
Query: 181 D 183
D
Sbjct: 358 D 358