BLASTX nr result

ID: Rehmannia29_contig00024979 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00024979
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020093326.1| DNA excision repair protein ERCC-1 [Ananas c...    67   9e-10
gb|OAY74219.1| DNA excision repair protein ERCC-1 [Ananas comosus]     67   9e-10
gb|ONM05062.1| DNA excision repair protein ERCC-1 [Zea mays]           65   1e-09
gb|EMS55554.1| DNA excision repair protein ERCC-1 [Triticum urartu]    66   1e-09
ref|XP_004982591.1| DNA excision repair protein ERCC-1 [Setaria ...    66   2e-09
gb|ONM05061.1| DNA excision repair protein ERCC-1 [Zea mays]           65   2e-09
gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]          65   2e-09
ref|NP_001131279.1| DNA excision repair protein ERCC-1 [Zea mays...    65   2e-09
ref|XP_002464363.1| DNA excision repair protein ERCC-1 [Sorghum ...    65   2e-09
gb|PAN46455.1| hypothetical protein PAHAL_I02786 [Panicum hallii]      65   2e-09
ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-...    65   3e-09
ref|XP_015612964.1| PREDICTED: DNA excision repair protein ERCC-...    65   4e-09
gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Ory...    65   4e-09
gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japo...    65   4e-09
gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indi...    65   4e-09
gb|OEL36807.1| DNA excision repair protein ERCC-1 [Dichanthelium...    65   4e-09
ref|XP_020192177.1| DNA excision repair protein ERCC-1 [Aegilops...    64   5e-09
ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-...    64   5e-09
dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   7e-09
gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, pa...    63   1e-08

>ref|XP_020093326.1| DNA excision repair protein ERCC-1 [Ananas comosus]
          Length = 417

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGWRY 95
           HVDVEDV+KPLHEVT+TALLHDCTLLCGW +
Sbjct: 198 HVDVEDVIKPLHEVTRTALLHDCTLLCGWSF 228


>gb|OAY74219.1| DNA excision repair protein ERCC-1 [Ananas comosus]
          Length = 417

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGWRY 95
           HVDVEDV+KPLHEVT+TALLHDCTLLCGW +
Sbjct: 198 HVDVEDVIKPLHEVTRTALLHDCTLLCGWSF 228


>gb|ONM05062.1| DNA excision repair protein ERCC-1 [Zea mays]
          Length = 257

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDV+KPLHE+T+TALLHDCTLLCGW
Sbjct: 181 HVDVEDVIKPLHEITRTALLHDCTLLCGW 209


>gb|EMS55554.1| DNA excision repair protein ERCC-1 [Triticum urartu]
          Length = 402

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGWR 92
           H+D+EDVVKPLHEVT+T+LLHDCTLLCGWR
Sbjct: 177 HIDIEDVVKPLHEVTRTSLLHDCTLLCGWR 206


>ref|XP_004982591.1| DNA excision repair protein ERCC-1 [Setaria italica]
 gb|KQK88341.1| hypothetical protein SETIT_036064mg [Setaria italica]
          Length = 392

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDVVKPLHE+T+TALLHDCTLLCGW
Sbjct: 180 HVDVEDVVKPLHEITRTALLHDCTLLCGW 208


>gb|ONM05061.1| DNA excision repair protein ERCC-1 [Zea mays]
          Length = 367

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDV+KPLHE+T+TALLHDCTLLCGW
Sbjct: 151 HVDVEDVIKPLHEITRTALLHDCTLLCGW 179


>gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]
          Length = 396

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDV+KPLHE+T+TALLHDCTLLCGW
Sbjct: 180 HVDVEDVIKPLHEITRTALLHDCTLLCGW 208


>ref|NP_001131279.1| DNA excision repair protein ERCC-1 [Zea mays]
 gb|ACF79618.1| unknown [Zea mays]
 gb|ONM05060.1| DNA excision repair protein ERCC-1 [Zea mays]
          Length = 397

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDV+KPLHE+T+TALLHDCTLLCGW
Sbjct: 181 HVDVEDVIKPLHEITRTALLHDCTLLCGW 209


>ref|XP_002464363.1| DNA excision repair protein ERCC-1 [Sorghum bicolor]
 gb|EER91361.1| hypothetical protein SORBI_3001G192900 [Sorghum bicolor]
          Length = 397

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDV+KPLHE+T+TALLHDCTLLCGW
Sbjct: 185 HVDVEDVIKPLHEITRTALLHDCTLLCGW 213


>gb|PAN46455.1| hypothetical protein PAHAL_I02786 [Panicum hallii]
          Length = 418

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHE+T+TALLHDCTLLCGW
Sbjct: 207 HIDVEDVVKPLHEITRTALLHDCTLLCGW 235


>ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-1 [Oryza brachyantha]
          Length = 383

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHEVT+TA+LHDCTLLCGW
Sbjct: 172 HIDVEDVVKPLHEVTRTAILHDCTLLCGW 200


>ref|XP_015612964.1| PREDICTED: DNA excision repair protein ERCC-1 [Oryza sativa
           Japonica Group]
 gb|ABB47891.1| DNA excision repair protein ERCC-1, putative, expressed [Oryza
           sativa Japonica Group]
 dbj|BAF26991.1| Os10g0518900 [Oryza sativa Japonica Group]
 dbj|BAG92132.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAT11682.1| Os10g0518900 [Oryza sativa Japonica Group]
          Length = 387

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 176 HIDVEDVVKPLHEVTRTSLLHDCTLLCGW 204


>gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Oryza sativa Japonica Group]
          Length = 395

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 176 HIDVEDVVKPLHEVTRTSLLHDCTLLCGW 204


>gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japonica Group]
          Length = 430

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 219 HIDVEDVVKPLHEVTRTSLLHDCTLLCGW 247


>gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indica Group]
          Length = 430

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+DVEDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 219 HIDVEDVVKPLHEVTRTSLLHDCTLLCGW 247


>gb|OEL36807.1| DNA excision repair protein ERCC-1 [Dichanthelium oligosanthes]
          Length = 436

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDVVKPLHE+T+TALLHDCT+LCGW
Sbjct: 206 HVDVEDVVKPLHEITRTALLHDCTVLCGW 234


>ref|XP_020192177.1| DNA excision repair protein ERCC-1 [Aegilops tauschii subsp.
           tauschii]
          Length = 388

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+D+EDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 177 HIDIEDVVKPLHEVTRTSLLHDCTLLCGW 205


>ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-1 [Brachypodium
           distachyon]
 gb|KQJ97482.1| hypothetical protein BRADI_3g31120v3 [Brachypodium distachyon]
          Length = 391

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 25/29 (86%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+D+EDVVKPLHEVT+T+LLHDCTLLCGW
Sbjct: 176 HIDIEDVVKPLHEVTRTSLLHDCTLLCGW 204


>dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 24/29 (82%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           H+D+EDVVKPLHE+T+T+LLHDCTLLCGW
Sbjct: 177 HIDIEDVVKPLHEITRTSLLHDCTLLCGW 205


>gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, partial [Theobroma
           cacao]
          Length = 298

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   HVDVEDVVKPLHEVTKTALLHDCTLLCGW 89
           HVDVEDVVKPL EVTKTALLHDCTLLCGW
Sbjct: 103 HVDVEDVVKPLLEVTKTALLHDCTLLCGW 131


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