BLASTX nr result

ID: Rehmannia29_contig00024886 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00024886
         (605 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07874.1| RNA polymerase I termination factor, Myb superfam...    56   9e-06
ref|XP_012829324.1| PREDICTED: cyclin-D-binding Myb-like transcr...    56   9e-06

>gb|PIN07874.1| RNA polymerase I termination factor, Myb superfamily [Handroanthus
           impetiginosus]
          Length = 597

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
 Frame = +2

Query: 350 EGDIYSLQQENVPDSVKGNIESTKHDGNTPXXXXXXXXXXXXXXXXXDDSCAAQQDYV-- 523
           EGD+ SLQQEN+P++V+GNIEST+ +  T                   DS A QQD    
Sbjct: 99  EGDLVSLQQENLPENVEGNIESTECN-ETAMKKLERKKKHKKEKDYKVDSSAVQQDITMK 157

Query: 524 DNDSNG---LMHTDEIQSNELESASKRKRK 604
           D++ NG   ++ +DEI+ NE E AS+ KR+
Sbjct: 158 DSEDNGNYPILLSDEIRYNEAEYASEGKRR 187


>ref|XP_012829324.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1
           [Erythranthe guttata]
          Length = 627

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
 Frame = +2

Query: 83  FETGSSKEVEGNESEKGMDGESFSGMXXXXXXXXXXXXXXXXINTEDGEFERE-IDGKEV 259
           FETG +KEVEG ES++  +GES SG                  N ++G+ E+E  DG EV
Sbjct: 121 FETGINKEVEGKESKRWSEGESVSGTTCSKERKTKKPKR----NHDNGDSEKEKEDGNEV 176

Query: 260 ETQSQNCEV---------HAMEMVERXXXXXXXXXXXXXEGDIYSLQQENVPDSVKGNIE 412
            T+ QN ++           +   +              EGD+ S+Q+ENVP    GN+E
Sbjct: 177 GTRKQNSKIPVERKKRKKEKIVSEDDNCWQESSDKAKHVEGDLSSMQKENVP----GNVE 232

Query: 413 STKHDGN 433
           S  + GN
Sbjct: 233 SVSYVGN 239


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