BLASTX nr result
ID: Rehmannia29_contig00024689
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00024689
(535 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012830394.1| PREDICTED: splicing factor U2af large subuni... 136 2e-34
ref|XP_011086108.1| splicing factor U2af large subunit A-like is... 108 2e-24
gb|PIM98807.1| Splicing factor U2AF, large subunit (RRM superfam... 107 6e-24
ref|XP_022845682.1| splicing factor U2af large subunit B-like is... 68 6e-10
ref|XP_022845681.1| splicing factor U2af large subunit B-like is... 68 6e-10
ref|XP_009773963.1| PREDICTED: splicing factor U2af large subuni... 66 2e-09
ref|XP_009773962.1| PREDICTED: splicing factor U2af large subuni... 66 2e-09
ref|XP_016489101.1| PREDICTED: splicing factor U2af large subuni... 66 3e-09
ref|XP_016489100.1| PREDICTED: splicing factor U2af large subuni... 66 3e-09
ref|XP_016489102.1| PREDICTED: splicing factor U2af large subuni... 61 1e-07
ref|XP_006347063.1| PREDICTED: splicing factor U2af large subuni... 61 1e-07
ref|XP_016438902.1| PREDICTED: splicing factor U2af large subuni... 59 4e-07
ref|XP_009608683.1| PREDICTED: splicing factor U2af large subuni... 59 5e-07
ref|XP_019266811.1| PREDICTED: splicing factor U2af large subuni... 59 5e-07
ref|XP_009608682.1| PREDICTED: splicing factor U2af large subuni... 59 5e-07
ref|XP_017190792.1| PREDICTED: splicing factor U2af large subuni... 56 5e-06
ref|XP_008383770.1| PREDICTED: splicing factor U2af large subuni... 56 5e-06
ref|XP_008383769.1| PREDICTED: splicing factor U2af large subuni... 56 6e-06
ref|XP_018848314.1| PREDICTED: splicing factor U2af large subuni... 56 6e-06
>ref|XP_012830394.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
[Erythranthe guttata]
Length = 529
Score = 136 bits (343), Expect = 2e-34
Identities = 65/92 (70%), Positives = 73/92 (79%)
Frame = -1
Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
F R+E N NEEKHQY+ QD QT+ RYYG RS N+DYG+R NQESSR KH DREKQY+Q
Sbjct: 39 FKRKESNQNEEKHQYQKQDGQTSERYYGGRSKNEDYGSRRNQESSRSYKHSEDREKQYKQ 98
Query: 97 RSPSRSDDKSISKRTSGFDVAPPVAGAFSNPS 2
RSPSRSDD+ SKRTSGFDVAPP A + NPS
Sbjct: 99 RSPSRSDDRYQSKRTSGFDVAPPAASSLPNPS 130
>ref|XP_011086108.1| splicing factor U2af large subunit A-like isoform X1 [Sesamum
indicum]
Length = 538
Score = 108 bits (271), Expect = 2e-24
Identities = 57/106 (53%), Positives = 68/106 (64%), Gaps = 14/106 (13%)
Frame = -1
Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
F R EWN N EKH+Y+++ T+ R+Y R+ NDDYG+R NQE SR KH G REKQY+
Sbjct: 39 FKRNEWNQNGEKHRYQDR---TSMRHYAGRNQNDDYGSRRNQEFSRQYKHDGHREKQYKH 95
Query: 97 RSPSRSDDKS--------------ISKRTSGFDVAPPVAGAFSNPS 2
RSPSRSDDKS SKRTSGFDVAPP+ A + S
Sbjct: 96 RSPSRSDDKSHGEVTSMSNSPPPGKSKRTSGFDVAPPIGAALPDSS 141
>gb|PIM98807.1| Splicing factor U2AF, large subunit (RRM superfamily) [Handroanthus
impetiginosus]
Length = 541
Score = 107 bits (268), Expect = 6e-24
Identities = 56/106 (52%), Positives = 70/106 (66%), Gaps = 14/106 (13%)
Frame = -1
Query: 277 FNRREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQ 98
F +++W+ + EK+QY+ QD +T RY+G ++ N+D NR QE SRY KHGGDREKQYR+
Sbjct: 38 FKKKDWSQSGEKNQYQRQDGRTTVRYHGGKTKNEDCSNRRIQECSRYYKHGGDREKQYRK 97
Query: 97 RSPSRSDD-------------KSISKRTSGFDVAPPV-AGAFSNPS 2
RS S SDD + SKRTSGFDVAPPV A A NPS
Sbjct: 98 RSLSESDDEPDRKSTSQSNSPRGKSKRTSGFDVAPPVAAAALPNPS 143
>ref|XP_022845682.1| splicing factor U2af large subunit B-like isoform X2 [Olea europaea
var. sylvestris]
Length = 539
Score = 67.8 bits (164), Expect = 6e-10
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
RREWN + + ++D ++R Y RS +D+G N E R+ + DREK +RQRS
Sbjct: 40 RREWNQDRTNY---SRDHGNSSRNYRGRSKYEDHGRPRNYEFGRHHNYDKDREKHHRQRS 96
Query: 91 PSRSDDKS--------------ISKRTSGFDVAP 32
PSRSDD+S SKRT+GFD+AP
Sbjct: 97 PSRSDDESHKQSRSLSNSPSRPRSKRTTGFDMAP 130
>ref|XP_022845681.1| splicing factor U2af large subunit B-like isoform X1 [Olea europaea
var. sylvestris]
Length = 540
Score = 67.8 bits (164), Expect = 6e-10
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
RREWN + + ++D ++R Y RS +D+G N E R+ + DREK +RQRS
Sbjct: 40 RREWNQDRTNY---SRDHGNSSRNYRGRSKYEDHGRPRNYEFGRHHNYDKDREKHHRQRS 96
Query: 91 PSRSDDKS--------------ISKRTSGFDVAP 32
PSRSDD+S SKRT+GFD+AP
Sbjct: 97 PSRSDDESHKQSRSLSNSPSRPRSKRTTGFDMAP 130
>ref|XP_009773963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nicotiana sylvestris]
Length = 539
Score = 66.2 bits (160), Expect = 2e-09
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ +E++H E +D + Y R +NDDY N + R +H G REK +RS
Sbjct: 40 RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+APPVA AFS+
Sbjct: 97 RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138
>ref|XP_009773962.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nicotiana sylvestris]
Length = 540
Score = 66.2 bits (160), Expect = 2e-09
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ +E++H E +D + Y R +NDDY N + R +H G REK +RS
Sbjct: 40 RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+APPVA AFS+
Sbjct: 97 RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138
>ref|XP_016489101.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nicotiana tabacum]
Length = 539
Score = 65.9 bits (159), Expect = 3e-09
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ +E++H E +D + Y R +NDDY N + R +H G REK RS
Sbjct: 40 RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+APPVA AFS+
Sbjct: 97 RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138
>ref|XP_016489100.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nicotiana tabacum]
Length = 540
Score = 65.9 bits (159), Expect = 3e-09
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ +E++H E +D + Y R +NDDY N + R +H G REK RS
Sbjct: 40 RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+APPVA AFS+
Sbjct: 97 RSRSKDRSYEKARSRSYSPLPPKSKRTSGFDMAPPVAAAFSS 138
>ref|XP_016489102.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Nicotiana tabacum]
Length = 519
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/88 (42%), Positives = 50/88 (56%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ +E++H E +D + Y R +NDDY N + R +H G REK RS
Sbjct: 40 RDKYSRDEDRHHGEYKDKSSKG--YRRNDDNDDYSRSRNHKFDR-RQHRGGREKDETHRS 96
Query: 91 PSRSDDKSISKRTSGFDVAPPVAGAFSN 8
S SKRTSGFD+APPVA AFS+
Sbjct: 97 RS-------SKRTSGFDMAPPVAAAFSS 117
>ref|XP_006347063.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
tuberosum]
Length = 541
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Frame = -1
Query: 253 NEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRSDD 74
+++ H++ + + R Y R +N+DY N + R HGG REK +RS SRS D
Sbjct: 46 DQDHHRHREEYKDKSTRSYRRNDDNEDYSRSRNHKFDRRQDHGG-REKGETRRSRSRSKD 104
Query: 73 KSI--------------SKRTSGFDVAPPVAGAF 14
S SKRTSGFD+APPVA +F
Sbjct: 105 SSHDKARSRSSSPLPPKSKRTSGFDMAPPVAASF 138
>ref|XP_016438902.1| PREDICTED: splicing factor U2af large subunit A-like, partial
[Nicotiana tabacum]
Length = 305
Score = 59.3 bits (142), Expect = 4e-07
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ ++++H+ E +D ++R Y R +NDDY + N + R +H REK +RS
Sbjct: 40 RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+AP VA AFS+
Sbjct: 97 RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138
>ref|XP_009608683.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nicotiana tomentosiformis]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ ++++H+ E +D ++R Y R +NDDY + N + R +H REK +RS
Sbjct: 40 RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+AP VA AFS+
Sbjct: 97 RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138
>ref|XP_019266811.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nicotiana attenuata]
gb|OIT05576.1| splicing factor u2af large subunit b [Nicotiana attenuata]
Length = 540
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ ++++H+ E +D ++R Y R +NDDY N + R +H REK +RS
Sbjct: 40 RDKYSRDQDRHREEYKDK--SSRGYRRNDDNDDYSPSRNHKFDR-RQHREGREKGETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+AP VA AFS+
Sbjct: 97 HSRSKDRSYEKARSRSNSPLPPKSKRTSGFDMAPSVAAAFSS 138
>ref|XP_009608682.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nicotiana tomentosiformis]
Length = 540
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Frame = -1
Query: 271 RREWNPNEEKHQYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRS 92
R +++ ++++H+ E +D ++R Y R +NDDY + N + R +H REK +RS
Sbjct: 40 RDKYSRDQDRHRGEYKDK--SSRGYRRNDDNDDYSHSRNHKFDR-RQHREGREKGETRRS 96
Query: 91 PSRSDDKSI--------------SKRTSGFDVAPPVAGAFSN 8
SRS D+S SKRTSGFD+AP VA AFS+
Sbjct: 97 RSRSKDRSYGKARSRSNSPLPPKSKRTSGFDMAPSVATAFSS 138
>ref|XP_017190792.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Malus domestica]
Length = 521
Score = 56.2 bits (134), Expect = 5e-06
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = -1
Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
+Y Q + R+ R++ D Y NQ+ R+ + DRE+++R RS SRS
Sbjct: 38 RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97
Query: 79 ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
+S SKRTSGFD+APP A N S
Sbjct: 98 SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126
>ref|XP_008383770.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Malus domestica]
Length = 522
Score = 56.2 bits (134), Expect = 5e-06
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = -1
Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
+Y Q + R+ R++ D Y NQ+ R+ + DRE+++R RS SRS
Sbjct: 38 RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97
Query: 79 ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
+S SKRTSGFD+APP A N S
Sbjct: 98 SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126
>ref|XP_008383769.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Malus domestica]
Length = 526
Score = 56.2 bits (134), Expect = 6e-06
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = -1
Query: 238 QYENQDTQTNARYYGRRSNNDDYGNRGNQESSRYSKHGGDREKQYRQRSPSRS------- 80
+Y Q + R+ R++ D Y NQ+ R+ + DRE+++R RS SRS
Sbjct: 38 RYTRQYKDRSGRFDRGRNSYDGYRRGRNQDFDRHRDYDQDRERRHRHRSRSRSRSHSRDR 97
Query: 79 ---DDKSISKRTSGFDVAPPVAGAFSNPS 2
+S SKRTSGFD+APP A N S
Sbjct: 98 SPSHSRSKSKRTSGFDMAPPAGSALPNAS 126
>ref|XP_018848314.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Juglans regia]
Length = 538
Score = 56.2 bits (134), Expect = 6e-06
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 22/95 (23%)
Frame = -1
Query: 247 EKHQYENQDTQTNARYYGRRSNNDD-----YGNRGNQESSRYSKH---GGDREKQYRQRS 92
+KHQY +D + R Y RS DD Y + +S Y++H +RE+++R+RS
Sbjct: 40 DKHQYREKDGDRHHRNYKDRSTKDDNRGGKYDDYDRHQSGHYNRHHYSDRERERRHRRRS 99
Query: 91 PSRSDD--------------KSISKRTSGFDVAPP 29
SRS D S SKRTSGFD+APP
Sbjct: 100 RSRSRDGSRNESRSHSRSRSHSESKRTSGFDMAPP 134