BLASTX nr result

ID: Rehmannia29_contig00023851 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00023851
         (1114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094283.1| conserved oligomeric Golgi complex subunit 1...    71   1e-09
gb|PIN16662.1| Low density lipoprotein B-like protein [Handroant...    62   2e-06
ref|XP_012828743.1| PREDICTED: conserved oligomeric Golgi comple...    60   5e-06

>ref|XP_011094283.1| conserved oligomeric Golgi complex subunit 1 [Sesamum indicum]
 ref|XP_020553509.1| conserved oligomeric Golgi complex subunit 1 [Sesamum indicum]
          Length = 1061

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 34/48 (70%), Positives = 41/48 (85%)
 Frame = -2

Query: 1113 EKVSETSTVKAPLRRKQKVQQPKSFEGQRPTELVNRLSQRLDPIDWLT 970
            +++SE S +KAPLRRKQK QQP+S  G+R  +LVNRLSQRLDPIDWLT
Sbjct: 849  DELSEISKLKAPLRRKQKPQQPQSVMGERIKQLVNRLSQRLDPIDWLT 896


>gb|PIN16662.1| Low density lipoprotein B-like protein [Handroanthus impetiginosus]
          Length = 1062

 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -2

Query: 1113 EKVSETSTVKAPLRRKQKVQQPKSFEGQRPTELVNRLSQRLDPIDWLT 970
            E+    S +K+P RRKQ  QQPKS  G R  EL+N+LSQRLDPIDWLT
Sbjct: 850  EESPAISNLKSPFRRKQIAQQPKSIIGGRTKELLNQLSQRLDPIDWLT 897


>ref|XP_012828743.1| PREDICTED: conserved oligomeric Golgi complex subunit 1 [Erythranthe
            guttata]
 gb|EYU18079.1| hypothetical protein MIMGU_mgv1a000581mg [Erythranthe guttata]
          Length = 1060

 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -2

Query: 1113 EKVSETSTVKAPLRRKQKVQQPKSFEGQRPTELVNRLSQRLDPIDWLT 970
            E +SE  T ++P RRKQK QQ  +  G+R   LVN+LSQRLDPIDWLT
Sbjct: 848  EDLSEIFTGRSPFRRKQKAQQSNTVIGERTKPLVNQLSQRLDPIDWLT 895


Top