BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00023840
         (481 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA45782.1| hypothetical protein AXF42_Ash018333 [Apostasia s...   195   7e-60
ref|XP_016472554.1| PREDICTED: uncharacterized protein LOC107794...   198   1e-59
gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]   206   2e-59
emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]                199   1e-58
gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]           204   5e-58
gb|PNX87285.1| retrotransposon-related protein, partial [Trifoli...   195   1e-57
gb|ABF95979.1| retrotransposon protein, putative, Ty3-gypsy subc...   192   1e-57
gb|PAN24251.1| hypothetical protein PAHAL_J00743 [Panicum hallii]     195   2e-57
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...   202   2e-57
emb|CAA73042.1| polyprotein, partial [Ananas comosus]                 201   2e-57
gb|EOY03075.1| CCHC-type integrase [Theobroma cacao]                  188   2e-57
gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [...   200   4e-57
gb|PNX54659.1| retrotransposon-related protein, partial [Trifoli...   191   5e-57
gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]           200   2e-56
gb|OMO87331.1| Integrase, catalytic core [Corchorus capsularis]       193   2e-56
gb|PKA58643.1| RNA-directed DNA polymerase like [Apostasia shenz...   196   2e-56
dbj|GAU46468.1| hypothetical protein TSUD_402350 [Trifolium subt...   199   3e-56
dbj|GAU40783.1| hypothetical protein TSUD_26630 [Trifolium subte...   199   3e-56
gb|ABF95982.1| retrotransposon protein, putative, Ty3-gypsy subc...   199   3e-56
gb|KYP69549.1| Retrotransposable element Tf2 [Cajanus cajan]          186   4e-56

>gb|PKA45782.1| hypothetical protein AXF42_Ash018333 [Apostasia shenzhenica]
          Length = 263

 Score =  195 bits (496), Expect = 7e-60
 Identities = 85/159 (53%), Positives = 117/159 (73%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P+L   IK AQ+ D  + K+ + I+K + PEF I  +GI+RFRN++Y+P+  +++  I
Sbjct: 7   VQPNLHEKIKKAQQEDSEIAKIAQSIMKEDNPEFMIGSDGILRFRNRIYIPNSPELKREI 66

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L+EAH + Y+ HPGG KMY DL+  +WW+ MKN + + ++RCL CQRVK EHQR  GLLQ
Sbjct: 67  LSEAHSAGYSIHPGGTKMYHDLREQFWWLGMKNDIIKVISRCLVCQRVKIEHQRLGGLLQ 126

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            L IP WKWEHI MDF+  LP+++ G DAIWV+VDRLTK
Sbjct: 127 SLEIPTWKWEHITMDFICGLPKSK-GCDAIWVIVDRLTK 164


>ref|XP_016472554.1| PREDICTED: uncharacterized protein LOC107794570 [Nicotiana tabacum]
          Length = 381

 Score =  198 bits (504), Expect = 1e-59
 Identities = 86/159 (54%), Positives = 118/159 (74%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           VKP LL  ++ AQ+ D  L K  E++  G   +FS+ ++G + ++N++ VP+D+++R +I
Sbjct: 19  VKPVLLEQVQEAQKLDEKLVKRVEEVQNGRELDFSLRKDGTLFYKNRLCVPNDDELRKQI 78

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH S Y  HPGG KMY+ +K +YWW  MK  +AEF+++CL CQ++KAEHQ P+GLLQ
Sbjct: 79  LIEAHSSPYAMHPGGTKMYRTIKEHYWWSGMKKDIAEFISKCLVCQQIKAEHQVPAGLLQ 138

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IPEWKWE I MDFV+ LP T+  HDAIWV+VDRLTK
Sbjct: 139 PLSIPEWKWERITMDFVSGLPHTQRNHDAIWVIVDRLTK 177


>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
          Length = 809

 Score =  206 bits (525), Expect = 2e-59
 Identities = 91/159 (57%), Positives = 118/159 (74%)
 Frame = -1

Query: 478  VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
            V+P LLN I+  Q++D  L++  +K+  GE  EF + ++GI   R+++ VP D+Q+R  I
Sbjct: 546  VRPSLLNQIRELQKSDDWLKQEVQKLQDGEASEFRLNDDGIFMLRDRICVPKDDQLRRAI 605

Query: 298  LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
            L EAH S Y  HPG  KMY+ +K +YWW  MK  +AEFVA+CLTCQ++KAEHQ+PSG LQ
Sbjct: 606  LEEAHSSAYALHPGSTKMYRTIKESYWWPGMKRDIAEFVAKCLTCQQIKAEHQKPSGTLQ 665

Query: 118  PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            PL IPEWKWEH+ MDFV  LPRT+ G DAIWV+VDRLTK
Sbjct: 666  PLLIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTK 704


>emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]
          Length = 533

 Score =  199 bits (507), Expect = 1e-58
 Identities = 85/159 (53%), Positives = 117/159 (73%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P L++ +   Q+ D+ L K+KE + K  R +F++ +NG++   N++ VP  ++++  I
Sbjct: 301 VRPTLIDKVHQMQDQDLQLLKLKENVQKDLRTDFAVRDNGVLVMGNRLCVPDIKELKKEI 360

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           + EAH S Y  HPG  KMY+ L+ +YWW  MK ++AEFV+RCL CQ++KAEHQRP+G  Q
Sbjct: 361 MEEAHCSAYAMHPGSTKMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQ 420

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IPEWKWEHI MDFVT LPRT+ GHD +WVVVDRLTK
Sbjct: 421 PLPIPEWKWEHITMDFVTGLPRTQSGHDGVWVVVDRLTK 459


>gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]
          Length = 1401

 Score =  204 bits (520), Expect = 5e-58
 Identities = 91/159 (57%), Positives = 123/159 (77%)
 Frame = -1

Query: 478  VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
            V+P L+  IK AQ+ D+ L ++KE +  G + +F+I  +G ++F +++ VP+D  ++  I
Sbjct: 986  VQPSLIERIKVAQKDDLELCRIKEDVENGLKTDFNIHIDGTLQFGSRLCVPNDFVLKREI 1045

Query: 298  LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
            L EAH S++T HPGG KMYKDLK N+WW NMK ++A+FV++CL CQ+VKAEHQRPSGLLQ
Sbjct: 1046 LEEAHGSRFTIHPGGTKMYKDLKENFWWNNMKREIAQFVSQCLVCQQVKAEHQRPSGLLQ 1105

Query: 118  PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            PL IPEWKWEHI MDFV  LPR+  G++ IWV+VDRLTK
Sbjct: 1106 PLEIPEWKWEHISMDFVMGLPRSTKGNNVIWVIVDRLTK 1144


>gb|PNX87285.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 447

 Score =  195 bits (496), Expect = 1e-57
 Identities = 90/159 (56%), Positives = 114/159 (71%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+  L+++IK  Q+ D +L+K+ E I   +  EF I  +GI+R   ++ VP+ E +R +I
Sbjct: 71  VRSSLVDNIKETQDKDPYLKKVMENIKLDKFSEFKIDSDGILRLDTRLCVPNIENLRKKI 130

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH S YT HPG NKMYKD+K  YWW  MK  VAEFV++CL CQ+VKAEHQRP+GL Q
Sbjct: 131 LEEAHHSSYTVHPGSNKMYKDIKEIYWWEGMKKDVAEFVSKCLICQQVKAEHQRPAGLFQ 190

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            + IPEWKWE I MDFVT LPRT  G D+ WV+VDRLTK
Sbjct: 191 RIEIPEWKWERITMDFVTGLPRTLRGFDSAWVIVDRLTK 229


>gb|ABF95979.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 352

 Score =  192 bits (488), Expect = 1e-57
 Identities = 86/158 (54%), Positives = 118/158 (74%)
 Frame = -1

Query: 475 KPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRIL 296
           KP LL+ I+ AQ+ D  ++ + + + +G+   F+  E+G +   N+V VP + +++  IL
Sbjct: 176 KPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 235

Query: 295 AEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQP 116
            EAH S Y+ HPG  KMY DLK  YWWV+MK ++AEFVA C  CQRVKA+HQRP+GLLQP
Sbjct: 236 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAKHQRPAGLLQP 295

Query: 115 LRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           L++PEWKW+ I MDF+T LP+T+GG+D+IWVVVDRLTK
Sbjct: 296 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTK 333


>gb|PAN24251.1| hypothetical protein PAHAL_J00743 [Panicum hallii]
          Length = 477

 Score =  195 bits (496), Expect = 2e-57
 Identities = 90/159 (56%), Positives = 113/159 (71%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P L  DI+  Q  D  +Q++K  I  G+ P+F+  E+G + FR ++ VP  E +R +I
Sbjct: 31  VEPTLDQDIRKGQLEDPKIQEIKGMIEAGKAPDFTEDEHGTVWFRKRICVPDVEHLREKI 90

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH S Y+ HPG  KMY+DLK  YWW  MK  VA  VA C  CQRVKAEHQRP+GLLQ
Sbjct: 91  LQEAHDSAYSIHPGSTKMYQDLKERYWWYGMKRDVAAHVALCDVCQRVKAEHQRPAGLLQ 150

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL++PEWKWE I MDF+  LPRTR G+D+IWV+VDRLTK
Sbjct: 151 PLKVPEWKWEEIGMDFIVGLPRTRDGYDSIWVIVDRLTK 189


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score =  202 bits (515), Expect = 2e-57
 Identities = 88/159 (55%), Positives = 118/159 (74%)
 Frame = -1

Query: 478  VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
            V+P LLN I+  Q++D  L++  +K+  G+  EF + ++G +  R+++ VP D+Q+R  I
Sbjct: 1041 VRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRLSDDGTLMLRDRICVPKDDQLRRAI 1100

Query: 298  LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
            L EAH S Y  HPG  KMY+ +K +YWW  M+  +AEFVA+CLTCQ++KAEHQ+PSG LQ
Sbjct: 1101 LEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEFVAKCLTCQQIKAEHQKPSGTLQ 1160

Query: 118  PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            PL IPEWKWEH+ MDFV  LPRT+ G DAIWV+VDRLTK
Sbjct: 1161 PLSIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTK 1199


>emb|CAA73042.1| polyprotein, partial [Ananas comosus]
          Length = 871

 Score =  201 bits (512), Expect = 2e-57
 Identities = 94/159 (59%), Positives = 119/159 (74%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P LL+ IK  Q +DV LQK+K K++ G   +F++  +G++RFR ++ VP+D  I+  I
Sbjct: 468 VQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDI 527

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAHR+ Y  HPGG KMYKDLK  YWW  +K  V EFVA+CLTCQ+VKAEH+ P+G LQ
Sbjct: 528 LQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQ 587

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            L IP WKWE I MDFVT LPR++ GHDAIWV+VDRLTK
Sbjct: 588 SLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTK 626


>gb|EOY03075.1| CCHC-type integrase [Theobroma cacao]
          Length = 246

 Score =  188 bits (478), Expect = 2e-57
 Identities = 85/159 (53%), Positives = 112/159 (70%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P L++ IK AQ  D  + K  E     +   F+   +G++R+  ++YVP  + +R  I
Sbjct: 71  VRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGIDGVLRYGTRLYVPDGDGLRREI 130

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH + Y  HPG  KMY+DLK  YWW  +K  VAEFV++CL CQ+VK EHQ+P+GLLQ
Sbjct: 131 LEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKVEHQKPAGLLQ 190

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL +PEWKWEHI MDFVT LPRT GG+D+IW++VDRLTK
Sbjct: 191 PLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIIVDRLTK 229


>gb|PRQ45918.1| putative nucleotidyltransferase, Ribonuclease H [Rosa chinensis]
          Length = 815

 Score =  200 bits (509), Expect = 4e-57
 Identities = 88/159 (55%), Positives = 117/159 (73%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P L++ ++ AQ  D  LQ+++E +  G R +F +  +G + F N++ VP  + ++  I
Sbjct: 337 VRPILIDKVREAQLHDEALQEVREAVENGAREDFIVRGDGALMFGNRICVPKQDDLKQEI 396

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH S Y  HPGG KMY+ LK  YWW NMK ++A++V RCL CQ+VKAE Q+PSGLLQ
Sbjct: 397 LEEAHSSPYAMHPGGTKMYRTLKEYYWWSNMKREIADYVRRCLVCQQVKAERQKPSGLLQ 456

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IPEWKWEHI MDFV+ LPR+R GHD+IWV+VDRLTK
Sbjct: 457 PLPIPEWKWEHITMDFVSGLPRSRNGHDSIWVIVDRLTK 495


>gb|PNX54659.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 362

 Score =  191 bits (485), Expect = 5e-57
 Identities = 87/156 (55%), Positives = 116/156 (74%)
 Frame = -1

Query: 469 DLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAE 290
           DL + I  AQ  D++LQ    K      PEF++ E+GII+F  ++ VP+D +++  IL E
Sbjct: 157 DLRSMIGRAQAFDMNLQNRIGK------PEFTVSEDGIIQFEGRICVPNDVELKRLILEE 210

Query: 289 AHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLR 110
           AH+S ++ HPG  KMY DL++NYWW NMK ++AEFV+RC+ CQ+VK EHQ+P+G LQPL 
Sbjct: 211 AHKSGFSIHPGSXKMYHDLRKNYWWPNMKAEIAEFVSRCIVCQQVKIEHQKPAGPLQPLE 270

Query: 109 IPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           IPEWKWEHI MDFV+ LPR + G D+IWV+VDRLTK
Sbjct: 271 IPEWKWEHITMDFVSGLPRNQKGQDSIWVIVDRLTK 306


>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
          Length = 1385

 Score =  200 bits (508), Expect = 2e-56
 Identities = 90/159 (56%), Positives = 118/159 (74%)
 Frame = -1

Query: 478  VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
            ++P L+  IK AQ  D  LQK++  I  G   +F I ++G +RF +++ VP+D +I+  I
Sbjct: 931  IQPTLIERIKEAQLVDSALQKVRANIETGVPSDFRIHDDGSLRFDDRLCVPNDVEIKKVI 990

Query: 298  LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
            L EAH S YT HPGG KMY+DLK  YWW NMK ++ EFVA+C+ CQ+VK EHQRP+G LQ
Sbjct: 991  LDEAHYSGYTVHPGGTKMYRDLKETYWWNNMKREIGEFVAQCIVCQQVKVEHQRPAGQLQ 1050

Query: 118  PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            PL IPEWKWEHI MDFV+ LPR+  GH+++WV+VDRLTK
Sbjct: 1051 PLPIPEWKWEHITMDFVSGLPRSPRGHESVWVIVDRLTK 1089


>gb|OMO87331.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 492

 Score =  193 bits (490), Expect = 2e-56
 Identities = 83/159 (52%), Positives = 116/159 (72%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+P L++ I+ +QE D  L    EK+  G   E+S+ ++G+++   +V VP +E+++  +
Sbjct: 230 VRPTLVDQIRDSQEVDEKLNAELEKLYLGMPSEYSLRDDGVLQKLGRVCVPDNEELKRAV 289

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L EAH S Y  +PG  KMY+ ++ +YWW  MK  ++EFV+RCL CQ+VKAEHQ+P+G LQ
Sbjct: 290 LEEAHSSAYALYPGSTKMYRTIRESYWWPGMKKDISEFVSRCLVCQQVKAEHQKPTGTLQ 349

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IPEWKWEHI +DF+  LPRTR GHDAIWV+VDRLTK
Sbjct: 350 PLPIPEWKWEHITLDFIVGLPRTRHGHDAIWVIVDRLTK 388


>gb|PKA58643.1| RNA-directed DNA polymerase like [Apostasia shenzhenica]
          Length = 649

 Score =  196 bits (498), Expect = 2e-56
 Identities = 88/159 (55%), Positives = 115/159 (72%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V+PD L  +   Q  D+ +QK+ EK++ GE  EFS+ E G++R R ++ +P  + +R  +
Sbjct: 400 VRPDWLQMVVEGQSKDLAMQKIIEKVIGGETSEFSLDECGVLRLRTRLCIPDTDGLRQML 459

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L E+H SKYT HPG NKMY DLK+  WW  MK  V E V++C++CQ+VK+EHQRPSGLLQ
Sbjct: 460 LQESHNSKYTIHPGVNKMYNDLKQIAWWPGMKKDVVETVSKCISCQQVKSEHQRPSGLLQ 519

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IP WKWE + MDFV  LPR++ GHD IWVVVDRLTK
Sbjct: 520 PLPIPMWKWEEVAMDFVIGLPRSQQGHDVIWVVVDRLTK 558


>dbj|GAU46468.1| hypothetical protein TSUD_402350 [Trifolium subterraneum]
          Length = 1151

 Score =  199 bits (507), Expect = 3e-56
 Identities = 90/156 (57%), Positives = 118/156 (75%)
 Frame = -1

Query: 469  DLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAE 290
            DL + I +AQE D+ LQ+   K      PEF+I ++G+I+F N++ VP+D  ++  IL E
Sbjct: 674  DLRSTIGSAQEKDMDLQRRIGK------PEFTIADDGVIQFGNRICVPNDADLKRSILEE 727

Query: 289  AHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLR 110
            AH+S ++ HPG  KMY DLK+NYWW NMK ++AEFV+RC+ CQ+VK EHQ+P+G LQPL 
Sbjct: 728  AHKSGFSIHPGSTKMYHDLKKNYWWPNMKTEIAEFVSRCIVCQQVKIEHQKPAGPLQPLE 787

Query: 109  IPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            IPEWKWEHI MDFVT LPR + G D+IWV+VDRLTK
Sbjct: 788  IPEWKWEHITMDFVTGLPRNQKGEDSIWVIVDRLTK 823


>dbj|GAU40783.1| hypothetical protein TSUD_26630 [Trifolium subterraneum]
          Length = 1344

 Score =  199 bits (507), Expect = 3e-56
 Identities = 90/156 (57%), Positives = 118/156 (75%)
 Frame = -1

Query: 469  DLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAE 290
            DL + I +AQE D+ LQ+   K      PEF+I ++G+I+F N++ VP+D  ++  IL E
Sbjct: 883  DLRSTIGSAQEKDMDLQRRIGK------PEFTIADDGVIQFGNRICVPNDADLKRSILEE 936

Query: 289  AHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLR 110
            AH+S ++ HPG  KMY DLK+NYWW NMK ++AEFV+RC+ CQ+VK EHQ+P+G LQPL 
Sbjct: 937  AHKSGFSIHPGSTKMYHDLKKNYWWPNMKTEIAEFVSRCIVCQQVKIEHQKPTGPLQPLE 996

Query: 109  IPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            IPEWKWEHI MDFVT LPR + G D+IWV+VDRLTK
Sbjct: 997  IPEWKWEHITMDFVTGLPRNQKGEDSIWVIVDRLTK 1032


>gb|ABF95982.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1724

 Score =  199 bits (506), Expect = 3e-56
 Identities = 87/158 (55%), Positives = 121/158 (76%)
 Frame = -1

Query: 475  KPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRIL 296
            +P L++ ++AAQ  D  + ++K+ +  G+  +F   E+G IR   ++ VP D+++++ IL
Sbjct: 1276 RPTLVDQVRAAQVNDSEIVELKKNMRVGKARDFHEDEHGTIRMGERLCVPDDKELKDLIL 1335

Query: 295  AEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQP 116
             EAH+++Y+ HPG  KMY+DLK  +WWV+M+ ++AEFVA C  CQRVKAEHQRP+GLLQP
Sbjct: 1336 TEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQP 1395

Query: 115  LRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
            L+IPEWKWE I MDF+T LPRT  GHD+IWVVVDRLTK
Sbjct: 1396 LQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTK 1433


>gb|KYP69549.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 261

 Score =  186 bits (471), Expect = 4e-56
 Identities = 87/159 (54%), Positives = 112/159 (70%)
 Frame = -1

Query: 478 VKPDLLNDIKAAQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRI 299
           V  +LL +I  AQ  D  L   ++ I +G   EF++  +G++RF+N+V VPSD  +R  I
Sbjct: 4   VTSELLREIGEAQLVDSFLVARRDAIGQGIGGEFTLGVDGVLRFKNRVCVPSDPTLRCLI 63

Query: 298 LAEAHRSKYTTHPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQ 119
           L E H SK + HPG  KMY+DL++ +WW  MK  +A FV+ CL CQ+ K EHQ+PSGLLQ
Sbjct: 64  LEEGHGSKLSFHPGATKMYQDLRKIFWWPRMKKDIAAFVSACLVCQKAKIEHQKPSGLLQ 123

Query: 118 PLRIPEWKWEHIMMDFVTNLPRTRGGHDAIWVVVDRLTK 2
           PL IPEWKW+ I MDFV  LPRTR GHD+IWV+VDRLTK
Sbjct: 124 PLSIPEWKWDSISMDFVVALPRTRRGHDSIWVIVDRLTK 162