BLASTX nr result

ID: Rehmannia29_contig00023562 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00023562
         (672 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomen...    73   3e-13
emb|CAJ32479.1| hypothetical protein (chloroplast) [Nicotiana ta...    73   3e-13
ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicot...    73   3e-13

>ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomentosiformis]
 dbj|BAE47981.1| hypothetical protein (chloroplast) [Nicotiana tomentosiformis]
          Length = 90

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   GKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLKKIITT 113
           GKRGIRTLGT NSYNGLAIRRFSPLSHLSQLKKIITT
Sbjct: 54  GKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKKIITT 90


>emb|CAJ32479.1| hypothetical protein (chloroplast) [Nicotiana tabacum]
          Length = 90

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   GKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLKKIITT 113
           GKRGIRTLGT NSYNGLAIRRFSPLSHLSQLKKIITT
Sbjct: 54  GKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKKIITT 90


>ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicotiana undulata]
 gb|AEO95543.1| hypothetical protein (chloroplast) [Nicotiana undulata]
 gb|AEO95653.1| hypothetical protein [synthetic construct]
          Length = 90

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   GKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLKKIITT 113
           GKRGIRTLGT NSYNGLAIRRFSPLSHLSQLKKIITT
Sbjct: 54  GKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKKIITT 90


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