BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00023356
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU48550.1| hypothetical protein TSUD_99560 [Trifolium subte...    96   3e-20
ref|XP_019431610.1| PREDICTED: uncharacterized protein LOC109338...    94   1e-19
ref|XP_019425135.1| PREDICTED: uncharacterized protein LOC109334...    93   3e-19
dbj|GAU35044.1| hypothetical protein TSUD_30100 [Trifolium subte...    92   4e-19
ref|XP_019447303.1| PREDICTED: uncharacterized protein LOC109350...    92   4e-19
gb|PNX96519.1| ribonuclease H, partial [Trifolium pratense]            92   4e-19
dbj|GAU50559.1| hypothetical protein TSUD_180290 [Trifolium subt...    92   5e-19
ref|XP_019436006.1| PREDICTED: uncharacterized protein LOC109342...    89   6e-19
ref|XP_019423006.1| PREDICTED: uncharacterized protein LOC109332...    91   1e-18
ref|XP_019423060.1| PREDICTED: uncharacterized protein LOC109332...    90   3e-18
gb|PNY03215.1| ribonuclease H, partial [Trifolium pratense]            89   3e-18
gb|PNY02169.1| ribonuclease H [Trifolium pratense]                     90   4e-18
ref|XP_019418611.1| PREDICTED: uncharacterized protein LOC109329...    90   4e-18
ref|XP_019450653.1| PREDICTED: uncharacterized protein LOC109352...    89   5e-18
dbj|GAU49157.1| hypothetical protein TSUD_407030 [Trifolium subt...    89   5e-18
gb|PNY03176.1| ribonuclease H [Trifolium pratense]                     89   7e-18
gb|PRQ42233.1| putative RNA-directed DNA polymerase [Rosa chinen...    88   1e-17
ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa c...    88   1e-17
gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinen...    88   1e-17
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    88   2e-17

>dbj|GAU48550.1| hypothetical protein TSUD_99560 [Trifolium subterraneum]
          Length = 1373

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 56/134 (41%), Positives = 68/134 (50%)
 Frame = -1

Query: 403  RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
            R + + VN   L       QV  PS I+YADD++I C                YA +SGQ
Sbjct: 926  RGITNLVNSGQLSLINGTRQVAAPSHILYADDVLIFCKGTSNNIQVLSQFFAKYAQISGQ 985

Query: 223  IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
              NP KS +F    +S+    RI    G ++GTF   YLG PIFKG PKVA  QP+ DKI
Sbjct: 986  YVNPQKSTIF-SESISHSRLLRISQALGFNIGTFLFTYLGVPIFKGRPKVAYFQPVADKI 1044

Query: 43   IFKFRRWKGSALSI 2
              K   WK S LSI
Sbjct: 1045 KAKLSAWKASLLSI 1058


>ref|XP_019431610.1| PREDICTED: uncharacterized protein LOC109338761 [Lupinus
           angustifolius]
          Length = 891

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           L ED ++R +        L     PN +  PS ++YADDI+I C            +L+ 
Sbjct: 277 LAEDVLSRGITSLVVSKKLSTISGPNGIATPSHVLYADDILIFCKGAKRDLLHLRQLLDD 336

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           Y   SGQI NP+K K  F    +    + I +  G + G+ P  YLG P+FKG P+   L
Sbjct: 337 YGQASGQIINPSKCK--FYSNATPRKAANISSYLGFNAGSLPFTYLGVPLFKGKPRKIHL 394

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           QPI D+I+ K  +WKG +LSI
Sbjct: 395 QPIADRILGKLAKWKGHSLSI 415


>ref|XP_019425135.1| PREDICTED: uncharacterized protein LOC109334017 [Lupinus
           angustifolius]
          Length = 1050

 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 49/125 (39%), Positives = 67/125 (53%)
 Frame = -1

Query: 376 NLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQIFNPNKSKV 197
           N L     PN +  PS ++YADDI+I C            +L+ YA  SGQ  NPNK K 
Sbjct: 502 NKLSSISGPNGLTTPSHVLYADDILIFCKGTKRELLQLRNLLDDYAQASGQFINPNKCK- 560

Query: 196 FFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKIIFKFRRWKG 17
            F    +    +R+ +  G + G+ P  YLG P+FKG P+   L PI D+I+ K  +WKG
Sbjct: 561 -FYSNATPRKSARLSSYLGFNAGSLPFTYLGVPLFKGKPRKIFLLPIADRILNKLAKWKG 619

Query: 16  SALSI 2
            +LSI
Sbjct: 620 HSLSI 624


>dbj|GAU35044.1| hypothetical protein TSUD_30100 [Trifolium subterraneum]
          Length = 1167

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 50/119 (42%), Positives = 67/119 (56%)
 Frame = -1

Query: 358  RAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQIFNPNKSKVFFGGRV 179
            +    V  PS  +YADDI++ C            + N YA  SGQ+ +P+KS +F GG +
Sbjct: 704  KGSRNVSIPSHCLYADDIMVYCNGRHSNLVALKNLFNRYALASGQVVSPSKSTIFSGG-I 762

Query: 178  SNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKIIFKFRRWKGSALSI 2
            S+    +I    G ++G+ P  YLG PIFKG P+VA LQP+ DKI  K   WK S LSI
Sbjct: 763  SHARLLQIAQFIGFNIGSLPFNYLGVPIFKGRPRVAFLQPVADKIKAKLAAWKASLLSI 821


>ref|XP_019447303.1| PREDICTED: uncharacterized protein LOC109350526 [Lupinus
           angustifolius]
          Length = 1190

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 52/134 (38%), Positives = 67/134 (50%)
 Frame = -1

Query: 403 RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
           R +   V+ N L+P   P  ++ PS ++YADDI+I C            ++  YA   GQ
Sbjct: 579 RGITKLVSENKLKPVAGPGSIITPSHVLYADDIMIFCRGNKKDLTALKDLIVEYASSFGQ 638

Query: 223 IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
             NP+K K F+ G+ S      +    G   G FP  YLG P+FKG  K   LQPI DKI
Sbjct: 639 QINPSKCK-FYTGKASTRKIVELSNHMGFSAGCFPLNYLGVPLFKGKAKRIHLQPIVDKI 697

Query: 43  IFKFRRWKGSALSI 2
             K   WKG  LSI
Sbjct: 698 TCKLATWKGFYLSI 711


>gb|PNX96519.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1281

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 48/127 (37%), Positives = 65/127 (51%)
 Frame = -1

Query: 385  VNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQIFNPNK 206
            V+ + L+P      V  PS I+YADD+++ C                YA +SGQ  NP+K
Sbjct: 898  VSEDKLKPLNGTRNVSIPSHILYADDVMLFCKGTSSNIEVLSSFFARYAQISGQYINPHK 957

Query: 205  SKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKIIFKFRR 26
            S +F G      + S I +  G  +GT P +YLG PIFKG PK    QP+ DK+  K   
Sbjct: 958  STIFAGSITHTRLTS-IASSLGFCIGTLPFMYLGVPIFKGKPKAVYFQPLVDKVKMKLAS 1016

Query: 25   WKGSALS 5
            WK S L+
Sbjct: 1017 WKASLLT 1023


>dbj|GAU50559.1| hypothetical protein TSUD_180290 [Trifolium subterraneum]
          Length = 571

 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 50/132 (37%), Positives = 66/132 (50%)
 Frame = -1

Query: 397 VEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQIF 218
           +  A+    LQP      V  P+ ++YADDI++ C            + N Y  +SGQ+ 
Sbjct: 72  ISKALQDGELQPMVLCRNVQIPTHVLYADDIMVFCKGSKKHVCCLLHLFNSYGAISGQVI 131

Query: 217 NPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKIIF 38
           N  KS  F+ G + N     I  + G  +GT P  YLG PIF G PKV   Q + DKI F
Sbjct: 132 NKQKS-TFYSGAIPNSRLVMITNLLGFSVGTIPFTYLGYPIFVGKPKVIHFQSLVDKIKF 190

Query: 37  KFRRWKGSALSI 2
           K   WKG+ LSI
Sbjct: 191 KLASWKGAMLSI 202


>ref|XP_019436006.1| PREDICTED: uncharacterized protein LOC109342483 [Lupinus
           angustifolius]
          Length = 246

 Score = 89.0 bits (219), Expect = 6e-19
 Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           LVED ++R +        +     P Q+  P+ ++Y DDI+I C            ++  
Sbjct: 11  LVEDVLSRGISKLQVEDKIHSISGPGQISTPTHVLYVDDILISCKGVKGEILALNKLILT 70

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           YA  SGQ  NP+K K F        + S + T  G  MG+ P  Y+G PIF G P+   L
Sbjct: 71  YAQASGQHINPSKCKFFTTQATPTRI-STLPTWLGFSMGSLPFSYMGVPIFIGKPRAIHL 129

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           QPI D+I+ K  +WKGS+ SI
Sbjct: 130 QPIADRIVNKLTKWKGSSRSI 150


>ref|XP_019423006.1| PREDICTED: uncharacterized protein LOC109332480 [Lupinus
           angustifolius]
          Length = 1103

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 52/134 (38%), Positives = 70/134 (52%)
 Frame = -1

Query: 403 RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
           R ++  VN + +     PN +  PS ++YADD++I C            +   YA  SGQ
Sbjct: 414 RGIQHLVNDHKISTISGPNGLATPSHVLYADDVLIFCKGIKRELQCLQNLNRDYAHSSGQ 473

Query: 223 IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
             N +K K F+ G VS    + + +  G   G+FP  YLG PIFKG PK   LQPI D+I
Sbjct: 474 HINISKCK-FYTGNVSARKIATLTSFLGFSAGSFPFNYLGVPIFKGRPKRIHLQPIADRI 532

Query: 43  IFKFRRWKGSALSI 2
           + K   WKG  LSI
Sbjct: 533 LDKLGSWKGKLLSI 546


>ref|XP_019423060.1| PREDICTED: uncharacterized protein LOC109332532 [Lupinus
            angustifolius]
          Length = 982

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
 Frame = -1

Query: 400  LVEDAVNR--------NLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
            L ED ++R        N L     P  +  PS +++ADDI+I C            ++  
Sbjct: 817  LAEDVLSRGITKLVIDNKLSTITGPMNLHSPSHVLFADDILIFCKGTKRNLNCLKKLVKD 876

Query: 244  YADMSGQIFNPNKSKVFFGGRVSNHVR-SRIQTITGMHMGTFPTIYLGAPIFKGVPKVAS 68
            YA  SGQ  N +KSK +    ++NH R + I    G   GT P IYLG P+FKG PK   
Sbjct: 877  YAMASGQQINVSKSKFYTS--ITNHRRIASISATLGFVQGTIPFIYLGIPLFKGKPKKLH 934

Query: 67   LQPIFDKIIFKFRRWKGSALSI 2
            LQPI D+II K  +WKG++LS+
Sbjct: 935  LQPIADRIINKLSKWKGASLSL 956


>gb|PNY03215.1| ribonuclease H, partial [Trifolium pratense]
          Length = 361

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 51/129 (39%), Positives = 63/129 (48%)
 Frame = -1

Query: 388 AVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQIFNPN 209
           A+    LQP      +  PS ++YADDI+I C            I   Y   SGQ+ N  
Sbjct: 30  ALETGKLQPMTLSRGIHIPSHVLYADDIMIFCNASKRNIQTVLAIFKDYGQASGQLINTQ 89

Query: 208 KSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKIIFKFR 29
           KSK F+ G VSN     +  + G + G  P  YLG PIF G PK   +Q I DK+  K  
Sbjct: 90  KSK-FYAGSVSNARLLMLSNLIGFNSGVLPFTYLGCPIFVGKPKKIHVQAIADKVKNKLA 148

Query: 28  RWKGSALSI 2
            WKGS LSI
Sbjct: 149 TWKGSLLSI 157


>gb|PNY02169.1| ribonuclease H [Trifolium pratense]
          Length = 754

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 52/134 (38%), Positives = 66/134 (49%)
 Frame = -1

Query: 403 RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
           R +  A+    LQP      +  PS ++YADDI+I C            I  LY   SGQ
Sbjct: 197 RCISKAMTAGALQPMTLCRGIQVPSHVLYADDIMIFCKASKKNIKQLLLIFKLYGQASGQ 256

Query: 223 IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
           + N  KSK F+ G +SN     +  + G   G+ P IYLG PIF G PK   L  + DKI
Sbjct: 257 LINHQKSK-FYVGSISNARMLMLSNLFGFTSGSLPFIYLGCPIFMGKPKSIHLCALADKI 315

Query: 43  IFKFRRWKGSALSI 2
             K   WKGS +SI
Sbjct: 316 KAKLATWKGSFISI 329


>ref|XP_019418611.1| PREDICTED: uncharacterized protein LOC109329402 [Lupinus
           angustifolius]
          Length = 1168

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           + EDA++R +        +     P  +  PS I+YADDI++ C            +L  
Sbjct: 444 IAEDALSRGISNLVREGKISTISGPKGLQTPSHILYADDILLFCKGKKAELCELKKLLKD 503

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           YA+ SGQ  N +K K F+    S    + + +  G  +G+ P +YLG P+FKG PK   L
Sbjct: 504 YAEASGQHVNNSKCK-FYTASSSPRKMASLTSYLGFSVGSLPVLYLGIPLFKGRPKKIHL 562

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           QPI DKI+ K   WKGS LSI
Sbjct: 563 QPIADKILAKLATWKGSTLSI 583


>ref|XP_019450653.1| PREDICTED: uncharacterized protein LOC109352923 [Lupinus
            angustifolius]
          Length = 1326

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400  LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
            L ED ++R L        +        +  PS ++YADDI+I C            +++ 
Sbjct: 976  LAEDVLSRGLARLHAEGKIHSISGLGNISTPSHVLYADDILIFCKGIKRNILALKKLIDT 1035

Query: 244  YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
            YA  SGQ  NP+K K FF  + +    + I +  G   G+ P  YLG  IFKG PK   L
Sbjct: 1036 YAQASGQHINPSKCK-FFSTQATPSKIASISSWLGFTRGSLPFSYLGVSIFKGKPKTIHL 1094

Query: 64   QPIFDKIIFKFRRWKGSALSI 2
            QPI D+I+ K  +WKGS LSI
Sbjct: 1095 QPIADRIVLKLAKWKGSTLSI 1115


>dbj|GAU49157.1| hypothetical protein TSUD_407030 [Trifolium subterraneum]
          Length = 1369

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 47/134 (35%), Positives = 66/134 (49%)
 Frame = -1

Query: 403  RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
            R +   V+  +L P +    +  PS   YADD+++ C            +  +YA  SGQ
Sbjct: 1019 RSISKLVDDGMLDPIKGTRHIAVPSHTFYADDLMVFCKGKLAGLTALKELFTVYALQSGQ 1078

Query: 223  IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
            + N +KS +F G      + + I  +   ++G  P  YLG PIFKG PK   LQPI DKI
Sbjct: 1079 VINTSKSTIFSGSITQGRL-NLIANLLNFNLGVLPFNYLGVPIFKGKPKSIYLQPIADKI 1137

Query: 43   IFKFRRWKGSALSI 2
              K   WK S LS+
Sbjct: 1138 CSKLTAWKASLLSM 1151


>gb|PNY03176.1| ribonuclease H [Trifolium pratense]
          Length = 991

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           + ED ++RN+        L+  +    VV PS   YADDI++ C            +   
Sbjct: 422 IAEDVLSRNITKLVSEGKLRLSKGSRNVVIPSHCFYADDIMVYCTGRNSNLVALKDLFTS 481

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           YA  SGQ+ +  KS ++ GG +S+    +I    G  +G+ P  YLG PIFKG P+VA L
Sbjct: 482 YALASGQVVSAQKSTIYSGG-ISHSRLLQIAQYIGFSIGSLPFNYLGVPIFKGRPRVAYL 540

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           QP+ DKI  K   WK S LSI
Sbjct: 541 QPVADKIKAKLAAWKASLLSI 561


>gb|PRQ42233.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1140

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           L E+A++R L        L+P   P +   PS ++YADD+++ C              + 
Sbjct: 522 LAEEALSRGLHLLLQTRQLKPISFPRKCTAPSHVLYADDLMVFCRGDKNSLKRLRGFFDR 581

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           Y+  SGQ  N +KS  + G R S H +  +Q I G H G  P IYLG PIF G P+   L
Sbjct: 582 YSAASGQFINADKSTFYLGAR-SRHRKGTVQRILGFHAGRLPFIYLGVPIFCGKPRSCHL 640

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           Q I D+   +   W+G  LS+
Sbjct: 641 QVIADRAKSRLMGWQGRLLSM 661


>ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa chinensis]
          Length = 1248

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400 LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
           L E+A++R L        L+P   P +   PS ++YADD+++ C              + 
Sbjct: 522 LAEEALSRGLHLLLQTRQLKPISFPRKCTAPSHVLYADDLMVFCRGDKNSLKRLRGFFDR 581

Query: 244 YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
           Y+  SGQ  N +KS  + G R S H +  +Q I G H G  P IYLG PIF G P+   L
Sbjct: 582 YSAASGQFINADKSTFYLGAR-SRHRKGTVQRILGFHAGRLPFIYLGVPIFCGKPRSCHL 640

Query: 64  QPIFDKIIFKFRRWKGSALSI 2
           Q I D+   +   W+G  LS+
Sbjct: 641 QVIADRAKSRLMGWQGRLLSM 661


>gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1394

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
 Frame = -1

Query: 400  LVEDAVNRNL--------LQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNL 245
            L E+A++R L        L+P   P +   PS ++YADD+++ C              + 
Sbjct: 655  LAEEALSRGLHLLLQTRQLKPISFPRKCTAPSHVLYADDLMVFCRGDKNSLKRLRGFFDR 714

Query: 244  YADMSGQIFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASL 65
            Y+  SGQ  N  KS  + G R S H +  +Q I G H G  P IYLG PIF G P+   L
Sbjct: 715  YSAASGQFINAEKSTFYLGAR-SRHRKGTVQRILGFHAGRLPFIYLGVPIFCGKPRSCHL 773

Query: 64   QPIFDKIIFKFRRWKGSALSI 2
            Q I D+   +   W+G  LS+
Sbjct: 774  QAIADRAKSRLMGWQGRLLSM 794


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 49/134 (36%), Positives = 67/134 (50%)
 Frame = -1

Query: 403 RLVEDAVNRNLLQPFRAPNQVVFPSSIMYADDIVIMCGXXXXXXXXXXXILNLYADMSGQ 224
           R +    ++ L+    A      P    Y DD+++ C            +   YAD SGQ
Sbjct: 400 RSISILADKGLIDLIAASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQ 459

Query: 223 IFNPNKSKVFFGGRVSNHVRSRIQTITGMHMGTFPTIYLGAPIFKGVPKVASLQPIFDKI 44
           I N  KS +F GG +++   + I  I G ++G+ P  YLGAPIFKG PK    QPI DK+
Sbjct: 460 IMNIRKSFIFAGG-ITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKV 518

Query: 43  IFKFRRWKGSALSI 2
             K  +WK S LSI
Sbjct: 519 KAKLAKWKASLLSI 532