BLASTX nr result

ID: Rehmannia29_contig00023240 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00023240
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28193.1| hypothetical protein MIMGU_mgv1a008794mg [Erythra...    62   2e-08
ref|XP_012849082.1| PREDICTED: tobamovirus multiplication protei...    57   8e-07

>gb|EYU28193.1| hypothetical protein MIMGU_mgv1a008794mg [Erythranthe guttata]
          Length = 362

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   RQQESRTITFISDGSVPTHPQRWIAATSVQNQVVMLLSVN 120
           RQ+ESRTITF+SD  V THPQRW AATSVQNQV++LL ++
Sbjct: 316 RQEESRTITFMSDVPVATHPQRWTAATSVQNQVLLLLRLS 355


>ref|XP_012849082.1| PREDICTED: tobamovirus multiplication protein 1-like isoform X1
           [Erythranthe guttata]
 ref|XP_012849083.1| PREDICTED: tobamovirus multiplication protein 1-like isoform X2
           [Erythranthe guttata]
          Length = 354

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 1   RQQESRTITFISDGSVPTHPQRWIAATSVQNQV 99
           RQ+ESRTITF+SD  V THPQRW AATSVQNQV
Sbjct: 316 RQEESRTITFMSDVPVATHPQRWTAATSVQNQV 348


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