BLASTX nr result

ID: Rehmannia29_contig00022979 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00022979
         (675 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70355.1| hypothetical protein VITISV_013711 [Vitis vinifera]    57   3e-08
gb|KYP34557.1| hypothetical protein KK1_044473, partial [Cajanus...    39   9e-06

>emb|CAN70355.1| hypothetical protein VITISV_013711 [Vitis vinifera]
          Length = 862

 Score = 57.4 bits (137), Expect(2) = 3e-08
 Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = -2

Query: 404 NSCTLNLV---PNLNCT*LSISKLARDLQYVAKLSSQ*GNFYVFNLETTICSADKFSVPY 234
           N   LN +   PNL+C  LSI+KL RDLQ  AK  S    F   +L   I SA+  S  Y
Sbjct: 339 NDLNLNSILHGPNLDCNLLSINKLTRDLQCEAKFFSNLFKFQELDLGRMIGSAEMCSRLY 398

Query: 233 LLNIDSSLKRQIQTIRCVTFTSKS 162
           LL  D+ L+RQ Q   CV+F S S
Sbjct: 399 LLKGDTPLRRQTQNASCVSFKSLS 422



 Score = 28.9 bits (63), Expect(2) = 3e-08
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = -3

Query: 640 LPKRYIQKSRTATSVIGFVARNG*FLGASN*TKGK*HGPFI----RGVIITRDLTVFHSY 473
           + ++ +  S  + S IG +A+ G F  A    K     P+I        +T D T+FH Y
Sbjct: 252 MTEKAVPISSNSASGIGMLAQKGNFSNAFIVNKQH-SNPWIIDSGASDHMTGDGTIFHEY 310

Query: 472 SPGHEHSVLVNGDGSLLK 419
           +P +E   +   DGSL K
Sbjct: 311 NPYNEKYTVWIADGSLSK 328


>gb|KYP34557.1| hypothetical protein KK1_044473, partial [Cajanus cajan]
          Length = 437

 Score = 39.3 bits (90), Expect(2) = 9e-06
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = -2

Query: 383 VPNLNCT*LSISKLARDLQYVAKLSSQ*GNFYVFNLETTICSADKFSVPYLLNIDSS 213
           VP L+C  LSISKL RDL+ V K       F +     TI +A++ +  YLL ++ S
Sbjct: 356 VPILDCNLLSISKLTRDLKSVTKFFPNLCEFQILESGKTIGNAEECAGLYLLQVEES 412



 Score = 38.5 bits (88), Expect(2) = 9e-06
 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = -3

Query: 649 FRKLPKRYIQKSRTATSVIGFVARNG*FLGASN*TKGK*HGPFIRGVI---ITRDLTVFH 479
           F K     +QK  + T     VA+ G FL A N +KGK     I       +TRDLTVF 
Sbjct: 256 FSKEKMEALQKILSQTIGTATVAQKGNFLHALNTSKGKPKSWIIDSGASDHMTRDLTVFK 315

Query: 478 SYSPGHEHSVLVNGDGSLLK 419
           SYSP   +  +   DG+L K
Sbjct: 316 SYSPCLNNYTVRIADGTLSK 335


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