BLASTX nr result

ID: Rehmannia29_contig00022862 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00022862
         (561 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012837198.1| PREDICTED: RNA-binding protein 39 [Erythrant...    91   5e-18
ref|XP_011088626.1| RNA-binding protein 39 isoform X2 [Sesamum i...    87   1e-16
ref|XP_011088625.1| RNA-binding protein 39 isoform X1 [Sesamum i...    87   1e-16

>ref|XP_012837198.1| PREDICTED: RNA-binding protein 39 [Erythranthe guttata]
 gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Erythranthe guttata]
          Length = 600

 Score = 91.3 bits (225), Expect = 5e-18
 Identities = 62/152 (40%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
 Frame = -2

Query: 443 HEKDRRS-RYGSSAREREKDEKDRHTSSREHRIXXXXXXXXXXXXXXXXXXXXXXXXXXX 267
           HEKDRRS RYGSS+R+REK EKDRHTSSREHR                            
Sbjct: 70  HEKDRRSSRYGSSSRDREKGEKDRHTSSREHR-----------TRDKEEGSEKERTRDRD 118

Query: 266 XXDGNRESRDKERDSDKK----XXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHLERHTDE 99
                   RD+ERDSDKK                                R+  ERH DE
Sbjct: 119 RDRDRDRDRDRERDSDKKRDGNRERREREYERERDVDKKIDGNRERSHRSRSRSERHNDE 178

Query: 98  RGREKSRDVESIDKGIKEGQREREFRDRNHES 3
           +GREKSRD+E +DK  +E +RER+FRDR++ S
Sbjct: 179 QGREKSRDMEIVDKEPQERRRERDFRDRDNGS 210


>ref|XP_011088626.1| RNA-binding protein 39 isoform X2 [Sesamum indicum]
          Length = 578

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 58/150 (38%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 HEKDRRSRYGSSAREREKDEKDRHTSSREHRIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
           H+KDR SRYGSS+R+REK E+DRH SSRE R                             
Sbjct: 67  HDKDRSSRYGSSSRDREKGERDRHISSRELR--------------------DRDKEHGTG 106

Query: 263 XDGNRE---SRDKERDSDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHLERHTDERG 93
            + NR+    R+KERDSDKK                            R++ ER+ D++G
Sbjct: 107 KERNRDRDRDREKERDSDKKGVGSRERRERESERERNKEEERERSKRSRSYSERNHDDQG 166

Query: 92  REKSRDVESIDKGIKEGQREREFRDRNHES 3
           REK+RD+E ID   KE +RER+F DR HES
Sbjct: 167 REKTRDMEIIDSDYKERRRERKFGDRAHES 196


>ref|XP_011088625.1| RNA-binding protein 39 isoform X1 [Sesamum indicum]
          Length = 604

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 58/150 (38%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 HEKDRRSRYGSSAREREKDEKDRHTSSREHRIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
           H+KDR SRYGSS+R+REK E+DRH SSRE R                             
Sbjct: 67  HDKDRSSRYGSSSRDREKGERDRHISSRELR--------------------DRDKEHGTG 106

Query: 263 XDGNRE---SRDKERDSDKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHLERHTDERG 93
            + NR+    R+KERDSDKK                            R++ ER+ D++G
Sbjct: 107 KERNRDRDRDREKERDSDKKGVGSRERRERESERERNKEEERERSKRSRSYSERNHDDQG 166

Query: 92  REKSRDVESIDKGIKEGQREREFRDRNHES 3
           REK+RD+E ID   KE +RER+F DR HES
Sbjct: 167 REKTRDMEIIDSDYKERRRERKFGDRAHES 196


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