BLASTX nr result
ID: Rehmannia29_contig00021901
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00021901
(637 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHT78807.1| Replication factor C subunit 5 [Capsicum annuum] 117 3e-30
ref|XP_011069427.1| replication factor C subunit 3 [Sesamum indi... 121 2e-29
ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [E... 119 1e-28
gb|PIN17049.1| Replication factor C, subunit RFC5 [Handroanthus ... 119 1e-28
ref|XP_016575185.1| PREDICTED: replication factor C subunit 3 is... 117 4e-28
ref|XP_022865767.1| replication factor C subunit 3 [Olea europae... 118 5e-28
gb|PHT45442.1| Replication factor C subunit 5 [Capsicum baccatum... 117 8e-28
ref|XP_016575184.1| PREDICTED: replication factor C subunit 3 is... 117 8e-28
ref|XP_019247689.1| PREDICTED: replication factor C subunit 5 [N... 116 2e-27
ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [N... 116 2e-27
ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [N... 116 2e-27
ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [S... 115 6e-27
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3 [S... 114 1e-26
ref|XP_015077024.1| PREDICTED: replication factor C subunit 3 [S... 114 2e-26
gb|POE95849.1| replication factor c subunit 3 [Quercus suber] 113 3e-26
ref|XP_023924304.1| replication factor C subunit 3 [Quercus suber] 113 6e-26
ref|XP_002520343.1| PREDICTED: replication factor C subunit 3 [R... 112 6e-26
ref|XP_021743689.1| replication factor C subunit 3-like [Chenopo... 112 7e-26
ref|XP_021759710.1| replication factor C subunit 3-like isoform ... 112 7e-26
ref|XP_018844703.1| PREDICTED: replication factor C subunit 3 is... 112 1e-25
>gb|PHT78807.1| Replication factor C subunit 5 [Capsicum annuum]
Length = 122
Score = 117 bits (293), Expect = 3e-30
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C+DKLQ
Sbjct: 43 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGCNDKLQ 102
Query: 186 LGALI 200
LG+LI
Sbjct: 103 LGSLI 107
>ref|XP_011069427.1| replication factor C subunit 3 [Sesamum indicum]
Length = 366
Score = 121 bits (304), Expect = 2e-29
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVRIQLINEMA++EYRLSLAC+DKL
Sbjct: 286 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRIQLINEMAEIEYRLSLACNDKL 345
Query: 183 QLGALI 200
QLG+L+
Sbjct: 346 QLGSLV 351
>ref|XP_012844118.1| PREDICTED: replication factor C subunit 5 [Erythranthe guttata]
gb|EYU31769.1| hypothetical protein MIMGU_mgv1a008738mg [Erythranthe guttata]
Length = 364
Score = 119 bits (299), Expect = 1e-28
Identities = 57/66 (86%), Positives = 65/66 (98%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
T+CKRISEIKTRKGLALVDIVREVTMFVFKI MPP+VR+QLINEMAD+EYRLSLAC+D+L
Sbjct: 284 TACKRISEIKTRKGLALVDIVREVTMFVFKIMMPPEVRVQLINEMADIEYRLSLACNDRL 343
Query: 183 QLGALI 200
QLG+L+
Sbjct: 344 QLGSLV 349
>gb|PIN17049.1| Replication factor C, subunit RFC5 [Handroanthus impetiginosus]
Length = 368
Score = 119 bits (299), Expect = 1e-28
Identities = 59/66 (89%), Positives = 65/66 (98%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
TSC+RISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLIN+MAD+EYRLSLA +DKL
Sbjct: 288 TSCQRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINDMADIEYRLSLASNDKL 347
Query: 183 QLGALI 200
QLG+L+
Sbjct: 348 QLGSLV 353
>ref|XP_016575185.1| PREDICTED: replication factor C subunit 3 isoform X2 [Capsicum
annuum]
Length = 315
Score = 117 bits (293), Expect = 4e-28
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C+DKLQ
Sbjct: 236 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGCNDKLQ 295
Query: 186 LGALI 200
LG+LI
Sbjct: 296 LGSLI 300
>ref|XP_022865767.1| replication factor C subunit 3 [Olea europaea var. sylvestris]
Length = 364
Score = 118 bits (295), Expect = 5e-28
Identities = 56/65 (86%), Positives = 64/65 (98%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
T+CKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINE+AD+EYRL+ AC+DKL
Sbjct: 284 TTCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPEVRVQLINELADIEYRLTFACNDKL 343
Query: 183 QLGAL 197
QLG+L
Sbjct: 344 QLGSL 348
>gb|PHT45442.1| Replication factor C subunit 5 [Capsicum baccatum]
gb|PHU14600.1| Replication factor C subunit 5 [Capsicum chinense]
Length = 358
Score = 117 bits (293), Expect = 8e-28
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C+DKLQ
Sbjct: 279 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGCNDKLQ 338
Query: 186 LGALI 200
LG+LI
Sbjct: 339 LGSLI 343
>ref|XP_016575184.1| PREDICTED: replication factor C subunit 3 isoform X1 [Capsicum
annuum]
Length = 360
Score = 117 bits (293), Expect = 8e-28
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP DVR+QLINEMADVEYRL+ C+DKLQ
Sbjct: 281 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPADVRVQLINEMADVEYRLTFGCNDKLQ 340
Query: 186 LGALI 200
LG+LI
Sbjct: 341 LGSLI 345
>ref|XP_019247689.1| PREDICTED: replication factor C subunit 5 [Nicotiana attenuata]
gb|OIT02377.1| replication factor c subunit 3 [Nicotiana attenuata]
Length = 360
Score = 116 bits (290), Expect = 2e-27
Identities = 56/65 (86%), Positives = 63/65 (96%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C+DKLQ
Sbjct: 281 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGCNDKLQ 340
Query: 186 LGALI 200
LG+LI
Sbjct: 341 LGSLI 345
>ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [Nicotiana sylvestris]
ref|XP_016504541.1| PREDICTED: replication factor C subunit 3-like [Nicotiana tabacum]
Length = 360
Score = 116 bits (290), Expect = 2e-27
Identities = 56/65 (86%), Positives = 63/65 (96%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C+DKLQ
Sbjct: 281 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGCNDKLQ 340
Query: 186 LGALI 200
LG+LI
Sbjct: 341 LGSLI 345
>ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [Nicotiana
tomentosiformis]
ref|XP_016481805.1| PREDICTED: replication factor C subunit 3-like [Nicotiana tabacum]
Length = 360
Score = 116 bits (290), Expect = 2e-27
Identities = 56/65 (86%), Positives = 63/65 (96%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPP+VR+QLINEMA++EYRL+ C+DKLQ
Sbjct: 281 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRVQLINEMANIEYRLTFGCNDKLQ 340
Query: 186 LGALI 200
LG+LI
Sbjct: 341 LGSLI 345
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [Solanum lycopersicum]
Length = 357
Score = 115 bits (287), Expect = 6e-27
Identities = 56/65 (86%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP +VR+QLINEMAD+EYRL+ C+DKLQ
Sbjct: 278 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQ 337
Query: 186 LGALI 200
LG+LI
Sbjct: 338 LGSLI 342
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3 [Solanum tuberosum]
Length = 357
Score = 114 bits (285), Expect = 1e-26
Identities = 56/65 (86%), Positives = 61/65 (93%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRISEIKTRKGLALVDIVREVTMFVFKIKMP VR+QLINEMAD+EYRL+ C+DKLQ
Sbjct: 278 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQ 337
Query: 186 LGALI 200
LG+LI
Sbjct: 338 LGSLI 342
>ref|XP_015077024.1| PREDICTED: replication factor C subunit 3 [Solanum pennellii]
Length = 357
Score = 114 bits (284), Expect = 2e-26
Identities = 55/65 (84%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
SCKRI+EIKTRKGLALVDIVREVTMFVFKIKMP +VR+QLINEMAD+EYRL+ C+DKLQ
Sbjct: 278 SCKRIAEIKTRKGLALVDIVREVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQ 337
Query: 186 LGALI 200
LG+LI
Sbjct: 338 LGSLI 342
>gb|POE95849.1| replication factor c subunit 3 [Quercus suber]
Length = 353
Score = 113 bits (282), Expect = 3e-26
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
S KRISE+KTRKGLALVDIVREVTMFVFKIKMP D+R+QLIN+MAD+EYRLSLAC+D+LQ
Sbjct: 274 SFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDIRVQLINDMADIEYRLSLACNDRLQ 333
Query: 186 LGALI 200
LG+LI
Sbjct: 334 LGSLI 338
>ref|XP_023924304.1| replication factor C subunit 3 [Quercus suber]
Length = 405
Score = 113 bits (282), Expect = 6e-26
Identities = 55/65 (84%), Positives = 63/65 (96%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
S KRISE+KTRKGLALVDIVREVTMFVFKIKMP D+R+QLIN+MAD+EYRLSLAC+D+LQ
Sbjct: 326 SFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDIRVQLINDMADIEYRLSLACNDRLQ 385
Query: 186 LGALI 200
LG+LI
Sbjct: 386 LGSLI 390
>ref|XP_002520343.1| PREDICTED: replication factor C subunit 3 [Ricinus communis]
gb|EEF42129.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis]
Length = 360
Score = 112 bits (280), Expect = 6e-26
Identities = 55/65 (84%), Positives = 61/65 (93%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
S KRISEIKT+KGLALVDIVREVTMFVFKIKMP DVR+QLIN+MAD+EYRLS CSDKLQ
Sbjct: 281 SFKRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQ 340
Query: 186 LGALI 200
LG+L+
Sbjct: 341 LGSLV 345
>ref|XP_021743689.1| replication factor C subunit 3-like [Chenopodium quinoa]
Length = 363
Score = 112 bits (280), Expect = 7e-26
Identities = 55/66 (83%), Positives = 61/66 (92%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
TS RISEIKTRKGLALVDI+REVTMFVF+IKMP DVR+QLIN+MAD+EYRLS CSDKL
Sbjct: 283 TSFSRISEIKTRKGLALVDIIREVTMFVFRIKMPADVRVQLINDMADIEYRLSFGCSDKL 342
Query: 183 QLGALI 200
QLG+LI
Sbjct: 343 QLGSLI 348
>ref|XP_021759710.1| replication factor C subunit 3-like isoform X2 [Chenopodium quinoa]
Length = 363
Score = 112 bits (280), Expect = 7e-26
Identities = 55/66 (83%), Positives = 61/66 (92%)
Frame = +3
Query: 3 TSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKL 182
TS RISEIKTRKGLALVDI+REVTMFVF+IKMP DVR+QLIN+MAD+EYRLS CSDKL
Sbjct: 283 TSFSRISEIKTRKGLALVDIIREVTMFVFRIKMPADVRVQLINDMADIEYRLSFGCSDKL 342
Query: 183 QLGALI 200
QLG+LI
Sbjct: 343 QLGSLI 348
>ref|XP_018844703.1| PREDICTED: replication factor C subunit 3 isoform X2 [Juglans
regia]
Length = 367
Score = 112 bits (279), Expect = 1e-25
Identities = 55/65 (84%), Positives = 62/65 (95%)
Frame = +3
Query: 6 SCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPDVRIQLINEMADVEYRLSLACSDKLQ 185
S KRISE+KTRKGLALVDIVREVTMFVFKIKMP DVR+QLIN++AD+EYRLSL C+DKLQ
Sbjct: 288 SFKRISEMKTRKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSLGCNDKLQ 347
Query: 186 LGALI 200
LG+LI
Sbjct: 348 LGSLI 352