BLASTX nr result

ID: Rehmannia29_contig00021898 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00021898
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012836538.1| PREDICTED: uncharacterized protein LOC105957...    50   9e-06

>ref|XP_012836538.1| PREDICTED: uncharacterized protein LOC105957157 [Erythranthe
           guttata]
 gb|EYU45911.1| hypothetical protein MIMGU_mgv1a015271mg [Erythranthe guttata]
          Length = 163

 Score = 50.4 bits (119), Expect(2) = 9e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = +3

Query: 3   YLDETKELEISTQRILASFRQRNRNGSGGRCE 98
           YLDETKE+EISTQ++L SFR+R     GGRCE
Sbjct: 106 YLDETKEMEISTQKMLESFRRRRNRDGGGRCE 137



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +2

Query: 116 EFRERRRPF-SSPKNRVIFL 172
           ++R RR PF SS K+RVIFL
Sbjct: 144 DYRRRRHPFSSSQKSRVIFL 163


Top