BLASTX nr result

ID: Rehmannia29_contig00021494 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00021494
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]      105   4e-23

>gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]
          Length = 358

 Score =  105 bits (263), Expect = 4e-23
 Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
 Frame = -3

Query: 593 RTARIDYKFNHTTGLGVLDGTHTQVSLDSQT-----NFSLDYDFALSLSHPNFLGCLFVD 429
           R+  + Y++N  T LGVL  T T+ +LD  T     N         S +H NFL C  +D
Sbjct: 4   RSVDVTYEYNSYTLLGVLHDTGTEFTLDDDTVGEEWNAGTS-SITFSFTHDNFLRCYIID 62

Query: 428 RLRFGDGDKDNMIYHLYDETLLTYLG-----------KYGVLRTYQTKDNPPITSNFVPK 282
           R+        N+++  YD TL  ++            +Y +    Q    P  T+N+VP 
Sbjct: 63  RI------SKNILHERYDLTLQEWINHLKRETINPIARYPIPHR-QGPTIPSHTANYVPN 115

Query: 281 EYRKIIRDMIRFVIFLHTQKKSLGGLSLDNLVVKGDLLKFWKIKFVKANDDTKRNDFSLL 102
           EYRK+I+ M+ FV+ +H    S  G  + N+V+K +++KFWK++F+ A+  +K NDF  L
Sbjct: 116 EYRKLIKSMVTFVVDIHDAGYSTAGFGMPNIVIKNEVVKFWKVQFITASMGSKNNDFICL 175

Query: 101 ASILRKLYEGQ 69
             ++  L+ G+
Sbjct: 176 HRVVESLFSGE 186


Top