BLASTX nr result
ID: Rehmannia29_contig00021323
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00021323
(470 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012843972.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-32
ref|XP_011080627.1| pentatricopeptide repeat-containing protein ... 125 1e-30
gb|PIN03051.1| hypothetical protein CDL12_24427 [Handroanthus im... 124 4e-30
gb|KZV43647.1| pentatricopeptide repeat-containing protein mitoc... 96 3e-20
gb|OVA09606.1| Pentatricopeptide repeat [Macleaya cordata] 69 9e-11
ref|XP_019104498.1| PREDICTED: pentatricopeptide repeat-containi... 67 8e-10
ref|XP_021862033.1| pentatricopeptide repeat-containing protein ... 66 1e-09
ref|XP_021772568.1| pentatricopeptide repeat-containing protein ... 66 1e-09
gb|KNA06777.1| hypothetical protein SOVF_177760 [Spinacia oleracea] 66 1e-09
gb|KVH91268.1| Pentatricopeptide repeat-containing protein [Cyna... 65 3e-09
ref|XP_008811604.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-09
ref|XP_010915324.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-09
ref|XP_019702465.1| PREDICTED: pentatricopeptide repeat-containi... 64 5e-09
ref|XP_021734593.1| pentatricopeptide repeat-containing protein ... 64 7e-09
ref|XP_019245594.1| PREDICTED: pentatricopeptide repeat-containi... 63 2e-08
gb|PKA47610.1| Pentatricopeptide repeat-containing protein [Apos... 63 2e-08
ref|XP_016457502.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-08
ref|XP_016484176.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-08
ref|XP_009804649.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-08
ref|XP_011011400.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-07
>ref|XP_012843972.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Erythranthe guttata]
Length = 549
Score = 128 bits (322), Expect = 9e-32
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = -1
Query: 257 AALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLC 78
AA++ RPR + AK T Q L HSFSD+E+L PSPAPC AV KPSLP L +SP+AD+LC
Sbjct: 8 AAVSHIFRPRFSSAKITLQLNLLHSFSDSEQLDPSPAPCAAVEKPSLPALQNSPEADSLC 67
Query: 77 QVLIRHHNPFHHMESSLQLYGIALS 3
QVLIRHHNPFHHMESSLQLYGI+LS
Sbjct: 68 QVLIRHHNPFHHMESSLQLYGISLS 92
>ref|XP_011080627.1| pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Sesamum indicum]
Length = 540
Score = 125 bits (314), Expect = 1e-30
Identities = 61/86 (70%), Positives = 67/86 (77%)
Frame = -1
Query: 260 MAALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTL 81
MAAL LRPR FAK T Q L+HSFSD+E PS PC +V KPSLPP HSP+AD+L
Sbjct: 1 MAALTHSLRPRFAFAKMTLQLKLFHSFSDSEHDEPSGPPCGSVEKPSLPPFQHSPEADSL 60
Query: 80 CQVLIRHHNPFHHMESSLQLYGIALS 3
QVLIRHHNPFHHMESSLQLYGI+LS
Sbjct: 61 SQVLIRHHNPFHHMESSLQLYGISLS 86
>gb|PIN03051.1| hypothetical protein CDL12_24427 [Handroanthus impetiginosus]
Length = 525
Score = 124 bits (310), Expect = 4e-30
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = -1
Query: 260 MAALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTL 81
MAAL+ F+R R FAK T + L++SFSD+E+ +PSP PC AV PSLPPL HSP+AD+L
Sbjct: 1 MAALSHFVRSRFAFAKSTQRLRLFYSFSDSEQHNPSPPPCAAVENPSLPPLQHSPEADSL 60
Query: 80 CQVLIRHHNPFHHMESSLQLYGIALS 3
QVLIRHHNPFHHMES+LQL+GI+LS
Sbjct: 61 SQVLIRHHNPFHHMESALQLHGISLS 86
>gb|KZV43647.1| pentatricopeptide repeat-containing protein mitochondrial-like
[Dorcoceras hygrometricum]
Length = 537
Score = 96.3 bits (238), Expect = 3e-20
Identities = 51/86 (59%), Positives = 60/86 (69%)
Frame = -1
Query: 260 MAALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTL 81
MAAL F+R R K FQ ++S SD+E+ P P A GKPSLPPL HSP+AD L
Sbjct: 1 MAALCGFIRHRCPLTK-AFQLKYFYSSSDSEQDHVFP-PSSAAGKPSLPPLQHSPEADNL 58
Query: 80 CQVLIRHHNPFHHMESSLQLYGIALS 3
+LI HHNPFHHMESSLQL+GI+LS
Sbjct: 59 SHILICHHNPFHHMESSLQLHGISLS 84
>gb|OVA09606.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 534
Score = 69.3 bits (168), Expect = 9e-11
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Frame = -1
Query: 272 LRSQMAALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVG---KPSLPPLHH 102
L +Q +L F+ L F+K +F + SD+ ELSP+P L KPSLP L
Sbjct: 5 LAAQQRSLFSFIP--LQFSKLSFSSYVS---SDSNELSPTPELDLGFPETLKPSLPSLQA 59
Query: 101 SPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
S DAD + ++LI HHNPFH MESSLQL GI++S
Sbjct: 60 SNDADMVSKILIEHHNPFHTMESSLQLNGISIS 92
>ref|XP_019104498.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Beta vulgaris subsp. vulgaris]
ref|XP_019104499.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Beta vulgaris subsp. vulgaris]
ref|XP_019104500.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Beta vulgaris subsp. vulgaris]
gb|KMT14060.1| hypothetical protein BVRB_4g078880 [Beta vulgaris subsp. vulgaris]
Length = 530
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -1
Query: 224 TFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFH 45
T + F L S S + LS S KPSLP L S DAD + +LI+HHNPFH
Sbjct: 21 TISHSLSSFSLNSSSSSSSSLSSST-------KPSLPTLQPSHDADLISNILIQHHNPFH 73
Query: 44 HMESSLQLYGIALS 3
MESSLQLYGI+LS
Sbjct: 74 AMESSLQLYGISLS 87
>ref|XP_021862033.1| pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Spinacia oleracea]
Length = 523
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 146 PCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
P + KPSLP L S DAD + +LI+HHNPFH MESSLQLYGI+LS
Sbjct: 33 PSSSSTKPSLPSLQQSHDADLISNILIQHHNPFHAMESSLQLYGISLS 80
>ref|XP_021772568.1| pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Chenopodium quinoa]
ref|XP_021772569.1| pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Chenopodium quinoa]
Length = 526
Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -1
Query: 164 LSPSPAPCLA-VGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
+SP+P+ + KPS+P L S DAD + +LI HHNPFH MESSLQLYGI+LS
Sbjct: 29 VSPNPSSSSSSTAKPSIPSLQPSHDADLISNILIEHHNPFHAMESSLQLYGISLS 83
>gb|KNA06777.1| hypothetical protein SOVF_177760 [Spinacia oleracea]
Length = 551
Score = 65.9 bits (159), Expect = 1e-09
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = -1
Query: 146 PCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
P + KPSLP L S DAD + +LI+HHNPFH MESSLQLYGI+LS
Sbjct: 33 PSSSSTKPSLPSLQQSHDADLISNILIQHHNPFHAMESSLQLYGISLS 80
>gb|KVH91268.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 519
Score = 65.1 bits (157), Expect = 3e-09
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = -1
Query: 227 LTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPF 48
+ F F+F+ S S + P A+ KPSLP L S DAD + Q+LI+HHNPF
Sbjct: 1 MMFTLSHFRFVSSFSCSTFD---PKEVVAEAMTKPSLPSLESSRDADLISQILIQHHNPF 57
Query: 47 HHMESSLQLYGIALS 3
H MESSLQL GI L+
Sbjct: 58 HSMESSLQLNGIKLT 72
>ref|XP_008811604.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Phoenix dactylifera]
Length = 527
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 164 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
LS SP P L +G KPS PPL S DAD L ++LI HHNPFH +ES LQL GI LS
Sbjct: 23 LSHSPEPELGLGLSGSSPKPSAPPLRPSADADALARLLIHHHNPFHPLESPLQLAGIRLS 82
>ref|XP_010915324.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like isoform X2 [Elaeis guineensis]
Length = 527
Score = 64.3 bits (155), Expect = 5e-09
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 164 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
LS SP P L +G KPS PPL S DAD L ++LI HHNPFH +ES LQL GI LS
Sbjct: 23 LSHSPLPELGLGFSGSSPKPSPPPLRPSDDADALARLLIHHHNPFHPLESPLQLVGIQLS 82
>ref|XP_019702465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like isoform X1 [Elaeis guineensis]
Length = 530
Score = 64.3 bits (155), Expect = 5e-09
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 164 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
LS SP P L +G KPS PPL S DAD L ++LI HHNPFH +ES LQL GI LS
Sbjct: 23 LSHSPLPELGLGFSGSSPKPSPPPLRPSDDADALARLLIHHHNPFHPLESPLQLVGIQLS 82
>ref|XP_021734593.1| pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Chenopodium quinoa]
Length = 523
Score = 63.9 bits (154), Expect = 7e-09
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = -1
Query: 137 AVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
+ KPS+P L S DAD + +LI HHNPFH MESSLQLYGI+LS
Sbjct: 36 STAKPSIPSLQPSHDADLISNILIEHHNPFHAMESSLQLYGISLS 80
>ref|XP_019245594.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Nicotiana attenuata]
gb|OIT03284.1| pentatricopeptide repeat-containing protein, mitochondrial
[Nicotiana attenuata]
Length = 530
Score = 62.8 bits (151), Expect = 2e-08
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = -1
Query: 233 PRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHN 54
P+ + F+ + S+ + L P +PSLP L S DAD + QVL++HHN
Sbjct: 13 PKTKTLVTSLHFLRFLCSSELQHLQPVDP------RPSLPQLEPSNDADLISQVLLQHHN 66
Query: 53 PFHHMESSLQLYGIALS 3
PFH MESSLQL+GI+L+
Sbjct: 67 PFHAMESSLQLHGISLT 83
>gb|PKA47610.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 540
Score = 62.8 bits (151), Expect = 2e-08
Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = -1
Query: 152 PAPCLAVG-----KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
P P LA+G KPS PPL S DAD + +LI HHNPFH MESSLQL G+ LS
Sbjct: 42 PDPNLAIGFERPPKPSPPPLEPSEDADAITHLLICHHNPFHAMESSLQLAGVLLS 96
>ref|XP_016457502.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Nicotiana tabacum]
Length = 524
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -1
Query: 125 PSLPPLHHSPDADTLCQVLIRHHNPFHHMESSLQLYGIALS 3
PSLP L S DAD + QVL++HHNPFH MESSLQL+GI+L+
Sbjct: 37 PSLPQLEPSNDADLISQVLVQHHNPFHAMESSLQLHGISLT 77
>ref|XP_016484176.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Nicotiana tabacum]
Length = 530
Score = 61.6 bits (148), Expect = 4e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 209 TFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESS 30
+ F+ + S+ + L P +PSLP L S DAD + QVL++HHNPFH MESS
Sbjct: 21 SLHFLRFLCSSELQHLEPVDP------RPSLPQLEPSNDADLISQVLLQHHNPFHAMESS 74
Query: 29 LQLYGIALS 3
+QL+GI+L+
Sbjct: 75 IQLHGISLT 83
>ref|XP_009804649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Nicotiana sylvestris]
Length = 530
Score = 61.6 bits (148), Expect = 4e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -1
Query: 209 TFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESS 30
+ F+ + S+ + L P +PSLP L S DAD + QVL++HHNPFH MESS
Sbjct: 21 SLHFLRFLCSSELQHLEPVDP------RPSLPQLEPSNDADLISQVLLQHHNPFHAMESS 74
Query: 29 LQLYGIALS 3
+QL+GI+L+
Sbjct: 75 IQLHGISLT 83
>ref|XP_011011400.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Populus euphratica]
Length = 548
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 206 FQFILYHSFS-DTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPFHHMESS 30
F FI H+FS D + SP LP L S DAD L Q+L+ HHNPFH MESS
Sbjct: 25 FSFIQNHNFSSDNDAFSPR-------NDALLPTLQPSNDADLLSQILLHHHNPFHAMESS 77
Query: 29 LQLYGIALS 3
LQL GI+L+
Sbjct: 78 LQLPGISLT 86