BLASTX nr result
ID: Rehmannia29_contig00021135
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00021135
(468 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus ... 86 1e-16
ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 k... 81 8e-15
ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 k... 66 1e-09
ref|XP_020528242.1| U11/U12 small nuclear ribonucleoprotein 65 k... 62 3e-08
gb|ERN14569.1| hypothetical protein AMTR_s00038p00125360 [Ambore... 62 3e-08
ref|XP_006853102.2| U11/U12 small nuclear ribonucleoprotein 65 k... 62 3e-08
emb|CAN75155.1| hypothetical protein VITISV_042642 [Vitis vinifera] 56 2e-07
emb|CDP20308.1| unnamed protein product [Coffea canephora] 60 2e-07
ref|XP_023756819.1| U11/U12 small nuclear ribonucleoprotein 65 k... 59 3e-07
ref|XP_018674191.1| PREDICTED: U11/U12 small nuclear ribonucleop... 59 4e-07
ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 k... 58 6e-07
gb|KVH90700.1| Nucleotide-binding, alpha-beta plait [Cynara card... 58 7e-07
gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma c... 58 9e-07
ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleop... 58 9e-07
ref|XP_022025954.1| U11/U12 small nuclear ribonucleoprotein 65 k... 58 9e-07
ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleop... 58 9e-07
gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma c... 58 9e-07
gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma c... 58 9e-07
gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corc... 57 1e-06
emb|CBI36673.3| unnamed protein product, partial [Vitis vinifera] 56 1e-06
>gb|PIN14775.1| Spliceosomal protein snRNP-U1A/U2B [Handroanthus impetiginosus]
Length = 456
Score = 85.9 bits (211), Expect = 1e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3
Query: 163 MAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
MAEAPPV P+ + GHH+ VAEES VTLLVRHLPEAIP DT+ RLFSHYGA+ V
Sbjct: 1 MAEAPPVSQPISYLGHHQPVAEESPVTLLVRHLPEAIPHDTVARLFSHYGAAHV 54
>ref|XP_022870119.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Olea
europaea var. sylvestris]
Length = 465
Score = 80.9 bits (198), Expect = 8e-15
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = -3
Query: 163 MAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
M EAPP P+ H G H V +ESS+TLLVRHLPEAIP DT++RLFSHYGASSV
Sbjct: 1 MTEAPPSRKPVHHLGIHETVPQESSITLLVRHLPEAIPHDTLSRLFSHYGASSV 54
>ref|XP_011088707.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Sesamum
indicum]
Length = 441
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = -3
Query: 115 HRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
H VA ES+VTLLVRHLPEAIP DT+TRLFSHYGASSV
Sbjct: 3 HPGVAHESTVTLLVRHLPEAIPHDTLTRLFSHYGASSV 40
>ref|XP_020528242.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X2
[Amborella trichopoda]
Length = 454
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -3
Query: 175 QPSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+PS P P PL F EE + TLLVRHLPEAIP +T++RLFSHYGASSV
Sbjct: 7 KPSASLNPTPQPQPLGTFN-----GEEKTATLLVRHLPEAIPHETLSRLFSHYGASSV 59
>gb|ERN14569.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -3
Query: 175 QPSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+PS P P PL F EE + TLLVRHLPEAIP +T++RLFSHYGASSV
Sbjct: 2 KPSASLNPTPQPQPLGTFN-----GEEKTATLLVRHLPEAIPHETLSRLFSHYGASSV 54
>ref|XP_006853102.2| U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
[Amborella trichopoda]
Length = 476
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -3
Query: 175 QPSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+PS P P PL F EE + TLLVRHLPEAIP +T++RLFSHYGASSV
Sbjct: 7 KPSASLNPTPQPQPLGTFN-----GEEKTATLLVRHLPEAIPHETLSRLFSHYGASSV 59
>emb|CAN75155.1| hypothetical protein VITISV_042642 [Vitis vinifera]
Length = 92
Score = 56.2 bits (134), Expect = 2e-07
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -3
Query: 103 AEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
AE+S+ TLL+RHLPEAIP DT++RLFS YGASSV
Sbjct: 16 AEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSV 49
>emb|CDP20308.1| unnamed protein product [Coffea canephora]
Length = 468
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -3
Query: 172 PSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
PS+ P Q+ G+H + E TLLVRHLPEAIP +T++RLFSHYGASSV
Sbjct: 11 PSVPPAIQPQLQTAQNLGYHLQ-SNEHEATLLVRHLPEAIPQETLSRLFSHYGASSV 66
>ref|XP_023756819.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Lactuca
sativa]
gb|PLY90647.1| hypothetical protein LSAT_6X37921 [Lactuca sativa]
Length = 456
Score = 59.3 bits (142), Expect = 3e-07
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -3
Query: 100 EESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+E+S TLL+RHLPEAIP DT+TRLFSHYGASSV
Sbjct: 35 KETSTTLLIRHLPEAIPHDTLTRLFSHYGASSV 67
>ref|XP_018674191.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674192.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674193.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674194.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674195.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674196.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
ref|XP_018674197.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
[Musa acuminata subsp. malaccensis]
Length = 469
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -3
Query: 184 PVQQPSIMAEAPPVPVPLQHFGHHRAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASS 5
P +P + PP VP G ++ TLLVRHLPEA+P D ++RLFSHYGASS
Sbjct: 13 PPHEPRMAPPPPPNSVPAAE-GSSGGAGVAAAATLLVRHLPEAMPFDVLSRLFSHYGASS 71
Query: 4 V 2
V
Sbjct: 72 V 72
>ref|XP_021904889.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Carica
papaya]
Length = 378
Score = 58.2 bits (139), Expect = 6e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -3
Query: 112 RAVAEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
R+ ESS +LLVRHLPEAIP DT++RLFSHYGAS+V
Sbjct: 29 RSTESESSTSLLVRHLPEAIPHDTLSRLFSHYGASAV 65
>gb|KVH90700.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 475
Score = 58.2 bits (139), Expect = 7e-07
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 11/67 (16%)
Frame = -3
Query: 169 SIMAEAPPVPVPLQHFGHHRAV-----------AEESSVTLLVRHLPEAIPLDTITRLFS 23
++MA PP +P G + E+ +VTLL+RHLPEAIP DT++RLFS
Sbjct: 45 ALMANVPPFQLPANSQGMYDYAYQNMGEVSSRPPEKEAVTLLIRHLPEAIPHDTLSRLFS 104
Query: 22 HYGASSV 2
HYGAS V
Sbjct: 105 HYGASRV 111
>gb|EOY10725.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 436
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSV
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSV 65
>ref|XP_017977954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X2 [Theobroma cacao]
Length = 465
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSV
Sbjct: 1 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSV 51
>ref|XP_022025954.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Helianthus
annuus]
ref|XP_022025963.1| U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Helianthus
annuus]
gb|OTG35228.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
[Helianthus annuus]
Length = 472
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Frame = -3
Query: 163 MAEAPPVPVPLQHFGHH-----------RAVAEESSVTLLVRHLPEAIPLDTITRLFSHY 17
MA PP P G H + E + TLL+RHLPEAIP DT++RLFSHY
Sbjct: 1 MANVPPFQPPNYSQGMHGYAYQSVGEVSQRPLENEATTLLIRHLPEAIPHDTLSRLFSHY 60
Query: 16 GASSV 2
GASSV
Sbjct: 61 GASSV 65
>ref|XP_007030220.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
isoform X1 [Theobroma cacao]
Length = 479
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSV
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSV 65
>gb|EOY10720.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10721.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY10722.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 479
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSV
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSV 65
>gb|EOY10723.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 487
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAE-------ESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHFG+ ES TLL+RHLPEAIP DT+ RLFSHYGASSV
Sbjct: 15 MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSV 65
>gb|OMP06725.1| hypothetical protein CCACVL1_01454, partial [Corchorus capsularis]
Length = 298
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 7/51 (13%)
Frame = -3
Query: 133 LQHFGHHRAVAEESS-------VTLLVRHLPEAIPLDTITRLFSHYGASSV 2
+QHF + A S+ VTLLVRHLPEAIP DT++RLFSHYGASSV
Sbjct: 15 MQHFVYQGAEGATSNPQELDYAVTLLVRHLPEAIPHDTLSRLFSHYGASSV 65
>emb|CBI36673.3| unnamed protein product, partial [Vitis vinifera]
Length = 190
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -3
Query: 103 AEESSVTLLVRHLPEAIPLDTITRLFSHYGASSV 2
AE+S+ TLL+RHLPEAIP DT++RLFS YGASSV
Sbjct: 16 AEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSV 49