BLASTX nr result
ID: Rehmannia29_contig00021134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00021134
(463 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containi... 146 1e-37
ref|XP_011094749.1| pentatricopeptide repeat-containing protein ... 143 1e-36
gb|PIN13305.1| hypothetical protein CDL12_14076 [Handroanthus im... 142 4e-36
ref|XP_021289489.1| pentatricopeptide repeat-containing protein ... 127 6e-31
ref|XP_021289488.1| pentatricopeptide repeat-containing protein ... 127 6e-31
ref|XP_007027210.2| PREDICTED: pentatricopeptide repeat-containi... 126 9e-31
gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily p... 126 9e-31
gb|KZV51570.1| pentatricopeptide repeat-containing protein chlor... 125 3e-30
emb|CDP06691.1| unnamed protein product [Coffea canephora] 124 6e-30
ref|XP_016738331.1| PREDICTED: pentatricopeptide repeat-containi... 124 7e-30
ref|XP_017648981.1| PREDICTED: pentatricopeptide repeat-containi... 124 8e-30
ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containi... 124 8e-30
gb|KHG21135.1| hypothetical protein F383_28297 [Gossypium arboreum] 124 8e-30
gb|PPS16052.1| hypothetical protein GOBAR_AA04521 [Gossypium bar... 124 8e-30
ref|XP_009776250.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-29
gb|OIT21153.1| pentatricopeptide repeat-containing protein, chlo... 122 2e-29
ref|XP_019239264.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-29
ref|XP_019184896.1| PREDICTED: pentatricopeptide repeat-containi... 122 3e-29
ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containi... 122 3e-29
ref|XP_015087801.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-29
>ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata]
gb|EYU41644.1| hypothetical protein MIMGU_mgv1a001284mg [Erythranthe guttata]
Length = 847
Score = 146 bits (368), Expect = 1e-37
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI++RDPTAAIR+AQNFPH E +FCSIILEFGKKRDL SALTAFEA+K+ S+PNMHAY
Sbjct: 200 LCISQRDPTAAIRYAQNFPHMEIMFCSIILEFGKKRDLASALTAFEAAKQNTSTPNMHAY 259
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR IYE L+
Sbjct: 260 RTIIDVCGLCGDYLKSRTIYEGLL 283
>ref|XP_011094749.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Sesamum indicum]
Length = 848
Score = 143 bits (361), Expect = 1e-36
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI K DPTAAIR+AQNF H E LFCSIILEFGKKRDL SAL AFEASK+ +SSPNMHAY
Sbjct: 200 LCIKKGDPTAAIRYAQNFSHGEMLFCSIILEFGKKRDLSSALIAFEASKQYLSSPNMHAY 259
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR IYE L+
Sbjct: 260 RTIIDVCGLCGDYLKSRAIYEELL 283
>gb|PIN13305.1| hypothetical protein CDL12_14076 [Handroanthus impetiginosus]
Length = 840
Score = 142 bits (357), Expect = 4e-36
Identities = 68/86 (79%), Positives = 76/86 (88%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI KR+P AAIR+AQNFPHAE LFCSII EFGKKRDL SALTAFEASK+ +SSPNMHA
Sbjct: 194 LCIKKRNPMAAIRYAQNFPHAEMLFCSIIHEFGKKRDLASALTAFEASKQNLSSPNMHAC 253
Query: 181 RTIIDICGLCGDYLKSRDIYEVLVVD 258
RTIID+CGLCG+YLKSR I+E L+ D
Sbjct: 254 RTIIDVCGLCGNYLKSRAIFEELLAD 279
>ref|XP_021289489.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Herrania umbratica]
Length = 825
Score = 127 bits (318), Expect = 6e-31
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P A+R+A PHA+ LFCS+I EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 202 VCVDKRNPNLAVRYACQLPHAKILFCSLISEFGKKRDLASALTAYEASKKNLSGPNMYLY 261
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDYLKSR+IYE LV
Sbjct: 262 RAIIDACGLCGDYLKSRNIYEDLV 285
>ref|XP_021289488.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Herrania umbratica]
Length = 847
Score = 127 bits (318), Expect = 6e-31
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P A+R+A PHA+ LFCS+I EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 202 VCVDKRNPNLAVRYACQLPHAKILFCSLISEFGKKRDLASALTAYEASKKNLSGPNMYLY 261
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDYLKSR+IYE LV
Sbjct: 262 RAIIDACGLCGDYLKSRNIYEDLV 285
>ref|XP_007027210.2| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Theobroma cacao]
Length = 858
Score = 126 bits (317), Expect = 9e-31
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P A+R+A PHA+ LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 212 VCVDKRNPNLAVRYACLLPHAKILFCSIISEFGKKRDLASALTAYEASKKNLSGPNMYLY 271
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDYLKSR+IYE LV
Sbjct: 272 RAIIDACGLCGDYLKSRNIYEDLV 295
>gb|EOY07712.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 858
Score = 126 bits (317), Expect = 9e-31
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P A+R+A PHA+ LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 212 VCVDKRNPNLAVRYACLLPHAKILFCSIISEFGKKRDLASALTAYEASKKNLSGPNMYLY 271
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDYLKSR+IYE LV
Sbjct: 272 RAIIDACGLCGDYLKSRNIYEDLV 295
>gb|KZV51570.1| pentatricopeptide repeat-containing protein chloroplastic-like
[Dorcoceras hygrometricum]
Length = 777
Score = 125 bits (313), Expect = 3e-30
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI KR+P AIRFAQ FPH E LFC++ILEFGKK DL SAL AFEASK+ + +MH Y
Sbjct: 196 LCIKKRNPVTAIRFAQIFPHMEILFCTVILEFGKKGDLMSALKAFEASKQNLDCISMHVY 255
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR I+E L+
Sbjct: 256 RTIIDVCGLCGDYLKSRTIFEELL 279
>emb|CDP06691.1| unnamed protein product [Coffea canephora]
Length = 853
Score = 124 bits (311), Expect = 6e-30
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LC+ +R P+AAIR+AQ FP TL C+I++EFGKKRDL SAL FE SK+ PNM+AY
Sbjct: 201 LCVYRRTPSAAIRYAQIFPQVHTLLCTIMIEFGKKRDLVSALCVFEVSKQNQGCPNMYAY 260
Query: 181 RTIIDICGLCGDYLKSRDIYEVLVVDCQII 270
RTIID+CGLCGDYLKSR IYE L +DC+ I
Sbjct: 261 RTIIDVCGLCGDYLKSRSIYEEL-LDCKFI 289
>ref|XP_016738331.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Gossypium hirsutum]
Length = 756
Score = 124 bits (310), Expect = 7e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 109 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 168
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDY+KSR+IY+ LV
Sbjct: 169 RAIIDTCGLCGDYMKSRNIYKDLV 192
>ref|XP_017648981.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Gossypium arboreum]
Length = 861
Score = 124 bits (310), Expect = 8e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 214 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 273
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDY+KSR+IY+ LV
Sbjct: 274 RAIIDTCGLCGDYMKSRNIYKDLV 297
>ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Gossypium raimondii]
gb|KJB62519.1| hypothetical protein B456_009G420800 [Gossypium raimondii]
Length = 861
Score = 124 bits (310), Expect = 8e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 214 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 273
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDY+KSR+IY+ LV
Sbjct: 274 RAIIDTCGLCGDYMKSRNIYKDLV 297
>gb|KHG21135.1| hypothetical protein F383_28297 [Gossypium arboreum]
Length = 861
Score = 124 bits (310), Expect = 8e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 214 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 273
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDY+KSR+IY+ LV
Sbjct: 274 RAIIDTCGLCGDYMKSRNIYKDLV 297
>gb|PPS16052.1| hypothetical protein GOBAR_AA04521 [Gossypium barbadense]
Length = 872
Score = 124 bits (310), Expect = 8e-30
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 184 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 243
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
R IID CGLCGDY+KSR+IY+ LV
Sbjct: 244 RAIIDTCGLCGDYMKSRNIYKDLV 267
>ref|XP_009776250.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana sylvestris]
ref|XP_016463308.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Nicotiana tabacum]
Length = 857
Score = 122 bits (307), Expect = 2e-29
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI++R P A+R+A FPH + +FC++ILEFGKK DL SALT FEASK+ +PN++ Y
Sbjct: 202 LCISQRKPNTAVRYAHIFPHVDIMFCTVILEFGKKGDLASALTVFEASKQNQDTPNLYVY 261
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR IYE L+
Sbjct: 262 RTIIDVCGLCGDYLKSRSIYEGLI 285
>gb|OIT21153.1| pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 867
Score = 122 bits (307), Expect = 2e-29
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI++R P AIR+A FPH + +FC++ILEFGKK DL SALT FEASK+ +PN++ Y
Sbjct: 202 LCISQRKPNTAIRYAHIFPHVDIMFCTVILEFGKKGDLASALTVFEASKQNQDTPNLYIY 261
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR IYE L+
Sbjct: 262 RTIIDVCGLCGDYLKSRSIYEGLI 285
>ref|XP_019239264.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana attenuata]
Length = 903
Score = 122 bits (307), Expect = 2e-29
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LCI++R P AIR+A FPH + +FC++ILEFGKK DL SALT FEASK+ +PN++ Y
Sbjct: 238 LCISQRKPNTAIRYAHIFPHVDIMFCTVILEFGKKGDLASALTVFEASKQNQDTPNLYIY 297
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCGDYLKSR IYE L+
Sbjct: 298 RTIIDVCGLCGDYLKSRSIYEGLI 321
>ref|XP_019184896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Ipomoea nil]
Length = 861
Score = 122 bits (306), Expect = 3e-29
Identities = 56/84 (66%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LC+ K +P+AAIR+A FPH + L C+II EFGKK DL+SALT FE SK+ + SPNM AY
Sbjct: 212 LCVRKVNPSAAIRYAHIFPHVQILLCTIIREFGKKGDLDSALTVFEVSKQDLDSPNMFAY 271
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RTIID+CGLCG+YLKSR IYE L+
Sbjct: 272 RTIIDVCGLCGEYLKSRPIYEELI 295
>ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Gossypium raimondii]
gb|KJB62520.1| hypothetical protein B456_009G420800 [Gossypium raimondii]
Length = 862
Score = 122 bits (306), Expect = 3e-29
Identities = 56/89 (62%), Positives = 72/89 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
+C++KR+P AIR++ PHA LFCSII EFGKKRDL SALTA+EASKK +S PNM+ Y
Sbjct: 214 ICVDKRNPNLAIRYSCLLPHAHMLFCSIICEFGKKRDLASALTAYEASKKNLSGPNMYLY 273
Query: 181 RTIIDICGLCGDYLKSRDIYEVLVVDCQI 267
R IID CGLCGDY+KSR+IY+ +V+ ++
Sbjct: 274 RAIIDTCGLCGDYMKSRNIYKQDLVNQRV 302
>ref|XP_015087801.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Solanum pennellii]
Length = 857
Score = 122 bits (305), Expect = 4e-29
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = +1
Query: 1 LCINKRDPTAAIRFAQNFPHAETLFCSIILEFGKKRDLESALTAFEASKKKISSPNMHAY 180
LC+++R P AA+R+A FPH + +FC+IILEFGKK DL SALT FEASK+ +PN++ Y
Sbjct: 206 LCVSQRKPNAAVRYAHIFPHVDIMFCTIILEFGKKGDLASALTVFEASKQNQDTPNLYIY 265
Query: 181 RTIIDICGLCGDYLKSRDIYEVLV 252
RT ID+CGLCGDYLKSR IYE L+
Sbjct: 266 RTAIDVCGLCGDYLKSRSIYEGLI 289