BLASTX nr result

ID: Rehmannia29_contig00021106 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00021106
         (681 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08563.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    60   6e-07

>gb|KVI08563.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
           var. scolymus]
          Length = 751

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 34/49 (69%), Positives = 37/49 (75%)
 Frame = -3

Query: 646 HLNGLTMRKPLEGFFTEESGFPHIEFDKVGNAYGEAVSVFQPFLLFEDE 500
           H N LTMRK L GF TEES FP IEF KVGNAYG AVSV++ F+  EDE
Sbjct: 262 HTNELTMRKLLHGF-TEESAFPQIEFHKVGNAYG-AVSVYEVFVHCEDE 308


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