BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00021029
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093738.1| CRM-domain containing factor CFM3, chloropla...   127   2e-31
gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanth...   125   1e-30
ref|XP_022888243.1| CRM-domain containing factor CFM3, chloropla...    92   5e-19
ref|XP_022888242.1| CRM-domain containing factor CFM3, chloropla...    92   5e-19
ref|XP_022888241.1| CRM-domain containing factor CFM3, chloropla...    92   5e-19
ref|XP_022888240.1| CRM-domain containing factor CFM3, chloropla...    92   6e-19
ref|XP_022888239.1| CRM-domain containing factor CFM3, chloropla...    92   6e-19
ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron sp...    83   5e-16

>ref|XP_011093738.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Sesamum indicum]
          Length = 887

 Score =  127 bits (318), Expect = 2e-31
 Identities = 75/142 (52%), Positives = 90/142 (63%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQT--------ERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN  RK VFNS+GS   QE VH          E   NE+P+VSV+ G +DL
Sbjct: 142 KSILAPWVHGNG-RKNVFNSEGSRNIQENVHPKDDGLHGIQEHWPNEDPLVSVVVGYEDL 200

Query: 160 VKK---------KFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           VK+         + GEFD+IPIGL EKNE LG ++S++  +MEDLS      SS K S  
Sbjct: 201 VKEVTENGRSEEEVGEFDDIPIGLSEKNEILGNEESEDFAAMEDLSTISLEISSEKCSND 260

Query: 313 ADDLKRLPWERKANAEFVKENK 378
           A+DL RLPWERK + EFVKE K
Sbjct: 261 ANDLMRLPWERKIDEEFVKEEK 282


>gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanthus impetiginosus]
          Length = 864

 Score =  125 bits (313), Expect = 1e-30
 Identities = 72/135 (53%), Positives = 88/135 (65%), Gaps = 10/135 (7%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQTERCQNEEPMVSVIQGSDDLVK------ 165
           KSTLAPWVHGN+PRK +F+S+G+ KFQE VHQ ++  +      + Q S+DLVK      
Sbjct: 132 KSTLAPWVHGNKPRKNLFSSEGTRKFQENVHQKDQALDGFHEHFLDQVSEDLVKGVVLDG 191

Query: 166 ---KKFGEFDEIPIGLPEKNENLGVDKSKN-VTSMEDLSISYRVTSSVKYSAGADDLKRL 333
              +K GEFD+IPIGLPEKN+ LG D+ KN VT ME  S  Y      K SA A+D KRL
Sbjct: 192 TSEEKCGEFDKIPIGLPEKNDLLGNDEGKNDVTFMEGSSTIYPEVIGKKCSADANDSKRL 251

Query: 334 PWERKANAEFVKENK 378
           PWE K +  FVKE K
Sbjct: 252 PWEGKIDGGFVKEEK 266


>ref|XP_022888243.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X3 [Olea europaea var. sylvestris]
          Length = 523

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQ--------TERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN+PRK + +S+ + K QE+ +         +E C+N+E   SV++ S DL
Sbjct: 136 KSILAPWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDL 195

Query: 160 VK---------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           +K         +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S  
Sbjct: 196 IKGVKLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDD 255

Query: 313 ADDLKRLPWERKANAEFVKENK 378
             D  RLPW+R  N + VKE K
Sbjct: 256 VSDSMRLPWQRGTNEDPVKEEK 277


>ref|XP_022888242.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X2 [Olea europaea var. sylvestris]
          Length = 558

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQ--------TERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN+PRK + +S+ + K QE+ +         +E C+N+E   SV++ S DL
Sbjct: 136 KSILAPWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDL 195

Query: 160 VK---------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           +K         +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S  
Sbjct: 196 IKGVKLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDD 255

Query: 313 ADDLKRLPWERKANAEFVKENK 378
             D  RLPW+R  N + VKE K
Sbjct: 256 VSDSMRLPWQRGTNEDPVKEEK 277


>ref|XP_022888241.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 558

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQ--------TERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN+PRK + +S+ + K QE+ +         +E C+N+E   SV++ S DL
Sbjct: 136 KSILAPWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDL 195

Query: 160 VK---------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           +K         +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S  
Sbjct: 196 IKGVKLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDD 255

Query: 313 ADDLKRLPWERKANAEFVKENK 378
             D  RLPW+R  N + VKE K
Sbjct: 256 VSDSMRLPWQRGTNEDPVKEEK 277


>ref|XP_022888240.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 891

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQ--------TERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN+PRK + +S+ + K QE+ +         +E C+N+E   SV++ S DL
Sbjct: 136 KSILAPWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDL 195

Query: 160 VK---------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           +K         +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S  
Sbjct: 196 IKGVKLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDD 255

Query: 313 ADDLKRLPWERKANAEFVKENK 378
             D  RLPW+R  N + VKE K
Sbjct: 256 VSDSMRLPWQRGTNEDPVKEEK 277


>ref|XP_022888239.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 891

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQ--------TERCQNEEPMVSVIQGSDDL 159
           KS LAPWVHGN+PRK + +S+ + K QE+ +         +E C+N+E   SV++ S DL
Sbjct: 136 KSILAPWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDL 195

Query: 160 VK---------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAG 312
           +K         +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S  
Sbjct: 196 IKGVKLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDD 255

Query: 313 ADDLKRLPWERKANAEFVKENK 378
             D  RLPW+R  N + VKE K
Sbjct: 256 VSDSMRLPWQRGTNEDPVKEEK 277


>ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Erythranthe guttata]
 gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Erythranthe guttata]
          Length = 835

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 52/125 (41%), Positives = 67/125 (53%)
 Frame = +1

Query: 4   KSTLAPWVHGNEPRKKVFNSKGSIKFQEKVHQTERCQNEEPMVSVIQGSDDLVKKKFGEF 183
           KS LAPWVHGNE R+++  S+GS K QE V   +        V    G  D   +KF EF
Sbjct: 136 KSILAPWVHGNESRRELPVSEGSTKNQENVRTEKEFLVSPVRVLAEYGKSD---EKFIEF 192

Query: 184 DEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKANAEF 363
           DE PI L EKN             +E+ + + R  + +K S   D L RLPWERK + EF
Sbjct: 193 DETPIRLTEKN-----------AVVENSATTDRTATRIKPSVNGDGLNRLPWERKNDEEF 241

Query: 364 VKENK 378
           VK++K
Sbjct: 242 VKKDK 246