BLASTX nr result
ID: Rehmannia29_contig00020842
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00020842
(495 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090767.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 199 3e-59
ref|XP_011090766.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 199 5e-59
gb|PIN16523.1| ATP-dependent RNA helicase [Handroanthus impetigi... 187 2e-54
ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 174 3e-49
gb|KDO36553.1| hypothetical protein CISIN_1g028887mg [Citrus sin... 121 2e-31
ref|XP_016497752.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 125 7e-31
gb|AAG34886.1|AF261031_1 putative chloroplast RNA helicase VDL' ... 119 8e-31
gb|AAG38500.1|AF261032_8 putative chloroplast RNA helicase VDL' ... 119 8e-31
ref|XP_016450792.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 125 1e-30
gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' ... 119 2e-30
gb|KDO36859.1| hypothetical protein CISIN_1g028848mg [Citrus sin... 118 2e-30
ref|XP_009603255.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 123 3e-30
emb|CDO99013.1| unnamed protein product [Coffea canephora] 123 4e-30
ref|XP_009760080.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 122 5e-30
ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 123 7e-30
ref|XP_019264117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 122 7e-30
ref|XP_016540537.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 122 8e-30
gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' ... 119 9e-30
ref|XP_016540529.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 122 1e-29
gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' ... 119 1e-29
>ref|XP_011090767.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2
[Sesamum indicum]
Length = 454
Score = 199 bits (507), Expect = 3e-59
Identities = 99/133 (74%), Positives = 108/133 (81%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MACSSAPHLRS PWTS+ +PL P FTR N + L + NR + L IS S+S TCV +S
Sbjct: 1 MACSSAPHLRSLPWTSTARPLSPPFTRSNSKLSLFSDHINRTVGCLSISGSISPTCVEQS 60
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
D GTTKNT S LRELCQG VPDHVLRRAEEVGYI+PTHVQ EALPVLFSGRDCVI AQTG
Sbjct: 61 DAGTTKNTSSGLRELCQGRVPDHVLRRAEEVGYIVPTHVQREALPVLFSGRDCVIHAQTG 120
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLLLI+S
Sbjct: 121 SGKTLAYLLLIYS 133
>ref|XP_011090766.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1
[Sesamum indicum]
Length = 472
Score = 199 bits (507), Expect = 5e-59
Identities = 99/133 (74%), Positives = 108/133 (81%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MACSSAPHLRS PWTS+ +PL P FTR N + L + NR + L IS S+S TCV +S
Sbjct: 1 MACSSAPHLRSLPWTSTARPLSPPFTRSNSKLSLFSDHINRTVGCLSISGSISPTCVEQS 60
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
D GTTKNT S LRELCQG VPDHVLRRAEEVGYI+PTHVQ EALPVLFSGRDCVI AQTG
Sbjct: 61 DAGTTKNTSSGLRELCQGRVPDHVLRRAEEVGYIVPTHVQREALPVLFSGRDCVIHAQTG 120
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLLLI+S
Sbjct: 121 SGKTLAYLLLIYS 133
>gb|PIN16523.1| ATP-dependent RNA helicase [Handroanthus impetiginosus]
Length = 471
Score = 187 bits (476), Expect = 2e-54
Identities = 100/133 (75%), Positives = 107/133 (80%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MACSS PHLRSFPWT S K L PSF RP V L NRT+R + SL ISASL S V +S
Sbjct: 1 MACSSVPHLRSFPWTYS-KTLFPSFARPKSKVSLFCNRTDRTVGSLLISASLGSAFVDQS 59
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
+ TTKNT S+LRELCQGHVPDHVLRRAE+VGYI+PT VQ EALPVLFSGRD VI AQTG
Sbjct: 60 EEETTKNTSSSLRELCQGHVPDHVLRRAEKVGYIVPTPVQREALPVLFSGRDAVIHAQTG 119
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLLLIFS
Sbjct: 120 SGKTLAYLLLIFS 132
>ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Erythranthe guttata]
gb|EYU41518.1| hypothetical protein MIMGU_mgv1a005973mg [Erythranthe guttata]
Length = 463
Score = 174 bits (440), Expect = 3e-49
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MA SSA HL PWTS TKP PSF+ PNCT + NRTNR I ASLSST V +S
Sbjct: 1 MAFSSAAHLHPLPWTSLTKPHYPSFSLPNCTGSIFCNRTNR------IFASLSSTDVDQS 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
D TK+T S LRELCQG+VPDHVL+RAEEVGY +PT+VQ+EALPVLFSGRDCVI AQTG
Sbjct: 55 DA-VTKDTSSPLRELCQGYVPDHVLQRAEEVGYRVPTNVQNEALPVLFSGRDCVIHAQTG 113
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLLLIFS
Sbjct: 114 SGKTLAYLLLIFS 126
>gb|KDO36553.1| hypothetical protein CISIN_1g028887mg [Citrus sinensis]
Length = 202
Score = 121 bits (303), Expect = 2e-31
Identities = 65/124 (52%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Frame = -2
Query: 356 SSTKPLCPSFTRPNCTVPLPFNRTNRM-----LDSLPISASLSSTCVGESDVGT-TKNTC 195
S+ P+ + + P + TNR + P+ A LSS+ V ++ T N
Sbjct: 7 SAAHPILVTRVNHKLSSPNSIDFTNRAFLPVSISLKPLRAVLSSSAVSTEELAAGTGNNS 66
Query: 194 STLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLL 15
TLRELCQGHVP+HVLRR EE GY+LPT +Q EALPVLFS RDC++ AQTGSGKTL YLL
Sbjct: 67 LTLRELCQGHVPEHVLRRMEETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLL 126
Query: 14 LIFS 3
LIFS
Sbjct: 127 LIFS 130
>ref|XP_016497752.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Nicotiana tabacum]
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gb|AAG34876.1|AF261021_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
Length = 466
Score = 125 bits (314), Expect = 7e-31
Identities = 70/133 (52%), Positives = 87/133 (65%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ V E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDV-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL I S
Sbjct: 115 SGKTLAYLLQILS 127
>gb|AAG34886.1|AF261031_1 putative chloroplast RNA helicase VDL' isoform 8 [Nicotiana
tabacum]
Length = 188
Score = 119 bits (298), Expect = 8e-31
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +T RELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127
>gb|AAG38500.1|AF261032_8 putative chloroplast RNA helicase VDL' isoform 8, partial
[Nicotiana tabacum]
Length = 191
Score = 119 bits (298), Expect = 8e-31
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +T RELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127
>ref|XP_016450792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Nicotiana tabacum]
Length = 466
Score = 125 bits (313), Expect = 1e-30
Identities = 71/133 (53%), Positives = 86/133 (64%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS SST E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIAS-SSTSDVEA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL I S
Sbjct: 115 SGKTLAYLLQILS 127
>gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' isoform 6, partial
[Nicotiana tabacum]
Length = 226
Score = 119 bits (298), Expect = 2e-30
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +T RELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127
>gb|KDO36859.1| hypothetical protein CISIN_1g028848mg [Citrus sinensis]
Length = 202
Score = 118 bits (296), Expect = 2e-30
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = -2
Query: 263 PISASLSSTCVGESDVGT-TKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALP 87
P+ A LSS+ V ++ T N TLRELCQGHVP+HVLRR +E GY+LPT +Q EALP
Sbjct: 43 PLRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALP 102
Query: 86 VLFSGRDCVIQAQTGSGKTLAYLLLIFS 3
VLFS RDC++ AQTGSGKTL YLLLIFS
Sbjct: 103 VLFSSRDCILHAQTGSGKTLTYLLLIFS 130
>ref|XP_009603255.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X2 [Nicotiana tomentosiformis]
Length = 413
Score = 123 bits (308), Expect = 3e-30
Identities = 70/138 (50%), Positives = 87/138 (63%)
Frame = -2
Query: 416 TWLISMACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSST 237
T SMAC A L + WTSS F +PN T P + P+ AS S++
Sbjct: 19 TGYFSMACFYATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTS 73
Query: 236 CVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVI 57
V E+ ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+
Sbjct: 74 DV-EARTEMKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVL 132
Query: 56 QAQTGSGKTLAYLLLIFS 3
AQTGSGKTLAYLL I S
Sbjct: 133 HAQTGSGKTLAYLLQILS 150
>emb|CDO99013.1| unnamed protein product [Coffea canephora]
Length = 478
Score = 123 bits (309), Expect = 4e-30
Identities = 70/138 (50%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Frame = -2
Query: 398 ACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGESD 219
+C SA H WTSS S T L F R +L I L V S
Sbjct: 3 SCFSATHPHYVSWTSSAN-FGQSSNPSYVTKSLVFRCRKRTQCALQIHCPLMKARVASSS 61
Query: 218 VGTT------KNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVI 57
V TT ++ STLRELC+GHVP+HV+ R EE+GY+ PT VQ +ALPVLF+GRDC++
Sbjct: 62 VDTTDAHIEENSSFSTLRELCKGHVPEHVINRMEEIGYVAPTEVQQQALPVLFAGRDCIL 121
Query: 56 QAQTGSGKTLAYLLLIFS 3
QAQTGSGKTLAYLL IFS
Sbjct: 122 QAQTGSGKTLAYLLQIFS 139
>ref|XP_009760080.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X2 [Nicotiana sylvestris]
Length = 390
Score = 122 bits (305), Expect = 5e-30
Identities = 68/133 (51%), Positives = 86/133 (64%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127
>ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Nicotiana tomentosiformis]
Length = 489
Score = 123 bits (308), Expect = 7e-30
Identities = 70/138 (50%), Positives = 87/138 (63%)
Frame = -2
Query: 416 TWLISMACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSST 237
T SMAC A L + WTSS F +PN T P + P+ AS S++
Sbjct: 19 TGYFSMACFYATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTS 73
Query: 236 CVGESDVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVI 57
V E+ ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+
Sbjct: 74 DV-EARTEMKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVL 132
Query: 56 QAQTGSGKTLAYLLLIFS 3
AQTGSGKTLAYLL I S
Sbjct: 133 HAQTGSGKTLAYLLQILS 150
>ref|XP_019264117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Nicotiana attenuata]
gb|OIT36665.1| dead-box atp-dependent rna helicase 58, chloroplastic [Nicotiana
attenuata]
Length = 466
Score = 122 bits (307), Expect = 7e-30
Identities = 68/133 (51%), Positives = 86/133 (64%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +P T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPKYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +TLRELC GHVP+HV+RR EEVGY++PT VQ +ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL I S
Sbjct: 115 SGKTLAYLLQILS 127
>ref|XP_016540537.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X3 [Capsicum annuum]
Length = 423
Score = 122 bits (305), Expect = 8e-30
Identities = 70/133 (52%), Positives = 83/133 (62%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS P SF P P+ AS +S+ V E
Sbjct: 1 MACFSATQLHALSWTSSLNPNF-SFLAPKL-----------FYYPKPLRASFTSSNV-EP 47
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ + LRELC+GHVPDHV+RRAEEVGY++PT VQ ALP LFSGRDCV+ AQTG
Sbjct: 48 TTETKVSSTAKLRELCRGHVPDHVIRRAEEVGYVIPTEVQRLALPFLFSGRDCVLHAQTG 107
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 108 SGKTLAYLLQVLS 120
>gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' isoform 5, partial
[Nicotiana tabacum]
Length = 289
Score = 119 bits (298), Expect = 9e-30
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +T RELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127
>ref|XP_016540529.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X2 [Capsicum annuum]
Length = 433
Score = 122 bits (305), Expect = 1e-29
Identities = 70/133 (52%), Positives = 83/133 (62%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS P SF P P+ AS +S+ V E
Sbjct: 1 MACFSATQLHALSWTSSLNPNF-SFLAPKL-----------FYYPKPLRASFTSSNV-EP 47
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ + LRELC+GHVPDHV+RRAEEVGY++PT VQ ALP LFSGRDCV+ AQTG
Sbjct: 48 TTETKVSSTAKLRELCRGHVPDHVIRRAEEVGYVIPTEVQRLALPFLFSGRDCVLHAQTG 107
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 108 SGKTLAYLLQVLS 120
>gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
tabacum]
Length = 294
Score = 119 bits (298), Expect = 1e-29
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = -2
Query: 401 MACSSAPHLRSFPWTSSTKPLCPSFTRPNCTVPLPFNRTNRMLDSLPISASLSSTCVGES 222
MAC SA L + WTSS F +PN T P + P+ AS S++ + E+
Sbjct: 1 MACFSATQLHTLLWTSSLNRTSHHF-KPNYTYRTP----KFLFRQKPLIASFSTSDI-EA 54
Query: 221 DVGTTKNTCSTLRELCQGHVPDHVLRRAEEVGYILPTHVQHEALPVLFSGRDCVIQAQTG 42
T ++ +T RELC GHVP+HV+RR EEVGY++PT VQ ALP L+SGRDCV+ AQTG
Sbjct: 55 RTETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTG 114
Query: 41 SGKTLAYLLLIFS 3
SGKTLAYLL + S
Sbjct: 115 SGKTLAYLLQMLS 127