BLASTX nr result
ID: Rehmannia29_contig00020504
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00020504
(556 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera] 280 1e-91
gb|KYP56106.1| Copia protein [Cajanus cajan] 276 3e-90
gb|KYP52241.1| Copia protein, partial [Cajanus cajan] 272 4e-90
emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera] 276 7e-90
emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera] 274 2e-89
emb|CAN62832.1| hypothetical protein VITISV_039101 [Vitis vinifera] 273 4e-89
gb|KYP74950.1| Copia protein, partial [Cajanus cajan] 268 7e-89
gb|KYP32199.1| Copia protein [Cajanus cajan] 269 1e-88
gb|KYP38353.1| Copia protein [Cajanus cajan] 268 2e-88
gb|KYP44163.1| Copia protein [Cajanus cajan] 268 4e-88
emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera] 270 5e-88
emb|CAN67702.1| hypothetical protein VITISV_041588 [Vitis vinifera] 270 7e-88
gb|KYP31929.1| Copia protein [Cajanus cajan] 266 1e-87
emb|CAN67780.1| hypothetical protein VITISV_006406 [Vitis vinifera] 269 1e-87
gb|KYP55105.1| Copia protein [Cajanus cajan] 274 2e-87
gb|KYP34009.1| Copia protein [Cajanus cajan] 266 2e-87
gb|KYP36591.1| Retrovirus-related Pol polyprotein from transposo... 264 3e-87
gb|KYP78961.1| Retrovirus-related Pol polyprotein from transposo... 265 3e-87
gb|KYP79054.1| Copia protein [Cajanus cajan] 265 7e-87
gb|KYP31237.1| Copia protein [Cajanus cajan] 265 7e-87
>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
Length = 334
Score = 280 bits (715), Expect = 1e-91
Identities = 132/184 (71%), Positives = 155/184 (84%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSLLYLTASRPDI+++VCLCARFQS PKESH+S VKRI RYLKGT+ GL
Sbjct: 112 IDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSXVKRILRYLKGTMNIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L G+SD+D+AG +RKSTSG+C FLG LVSW SKKQN V+LSTAEAEYI
Sbjct: 172 WYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQTL+D+ SFE+VPI CDN SAINI++NPV H+RTKHIEIRHHFLRD
Sbjct: 232 AAGLCCAQILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>gb|KYP56106.1| Copia protein [Cajanus cajan]
Length = 327
Score = 276 bits (705), Expect = 3e-90
Identities = 131/184 (71%), Positives = 153/184 (83%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D KYRGMIGSLLYL+ASRPDI+ +VCLCAR+QSNPKESH+SAVKRI RYL GT GL
Sbjct: 100 IDVKKYRGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRYLLGTTNLGL 159
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPKN F+L GYSDSD+AG DRKSTSG+C F+G LVSW SKKQN V+LSTAEAEYI
Sbjct: 160 WYPKNMPFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYI 219
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L+DY S +++PI CDN SAIN+++NPV H+RTKHIEIRHHFLRD
Sbjct: 220 AAGSCCAQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRD 279
Query: 543 CVSK 554
V K
Sbjct: 280 HVQK 283
>gb|KYP52241.1| Copia protein, partial [Cajanus cajan]
Length = 240
Score = 272 bits (696), Expect = 4e-90
Identities = 130/180 (72%), Positives = 151/180 (83%)
Frame = +3
Query: 15 KYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGLFYPK 194
KYRGMIGSLLYL+ASRPDI+ +VCLCAR+QSNPKESH+SAVKRI RYL GT GL+YPK
Sbjct: 17 KYRGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRYLLGTQNLGLWYPK 76
Query: 195 NENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYISAAF 374
N F+L GYSDSD+AG DRKSTSG+C F+G LVSW SKKQN V+LSTAEAEYI+A
Sbjct: 77 NMPFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYIAAGS 136
Query: 375 CCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRDCVSK 554
CC Q+LWMKQ L+DY S +++PI CDN SAIN+++NPV H+RTKHIEIRHHFLRD V K
Sbjct: 137 CCAQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRDHVQK 196
>emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera]
Length = 354
Score = 276 bits (705), Expect = 7e-90
Identities = 130/184 (70%), Positives = 154/184 (83%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSLLYLTASRPDI+++VCLCARFQS KESH+SAVKRI RYLKGT+ GL
Sbjct: 112 IDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCSKESHLSAVKRILRYLKGTMNIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L G+SD+D+AG +RKSTSG+C FLG LVSW SKKQN V+LST EAEYI
Sbjct: 172 WYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTTEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQTL+D+ SFE+VPI CDN SAINI++NPV H+RTKHIEIRHHFL+D
Sbjct: 232 AAGLCCAQILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLKD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera]
Length = 334
Score = 274 bits (701), Expect = 2e-89
Identities = 131/184 (71%), Positives = 152/184 (82%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSLLYLTASRPDI+++VCLCARFQS PKESH+SAVKRI RYLKGT+ GL
Sbjct: 112 IDSTMYRGMIGSLLYLTASRPDIMNSVCLCARFQSCPKESHLSAVKRILRYLKGTMDIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L GYSD+D+AG +RKSTSG+C FLG LVSW SKKQ V+LS EAEYI
Sbjct: 172 WYPKGDNFELIGYSDADFAGCKVERKSTSGTCHFLGHSLVSWHSKKQILVALSMVEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQTL D+ SFE+VPI CDN SAINI++NPV H+RTKHIEIRHHFLRD
Sbjct: 232 AAGLCCAQILWMKQTLNDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>emb|CAN62832.1| hypothetical protein VITISV_039101 [Vitis vinifera]
Length = 334
Score = 273 bits (698), Expect = 4e-89
Identities = 130/184 (70%), Positives = 153/184 (83%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSLLYL ASRPDI+++VCLCARFQS PKESH+SAVKRIFRYLKGT+ L
Sbjct: 112 IDSTMYRGMIGSLLYLIASRPDIMYSVCLCARFQSCPKESHLSAVKRIFRYLKGTMNIDL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L G+SD+D+AG +RKSTSG+C FLG LVSW SKKQN V+LSTAE EYI
Sbjct: 172 WYPKGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNLVALSTAETEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQTL+D+ SFE+VPI DN SAINI++NPV H+RTKHIEIRHHFLRD
Sbjct: 232 AAGLCCAQILWMKQTLSDFNLSFEHVPIKYDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>gb|KYP74950.1| Copia protein, partial [Cajanus cajan]
Length = 222
Score = 268 bits (686), Expect = 7e-89
Identities = 128/178 (71%), Positives = 149/178 (83%)
Frame = +3
Query: 21 RGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGLFYPKNE 200
RGMIGSLLYL+ASRPDI+ +VCLCAR+QSNPKESH+SAVKRI RYL GT GL+YPKN
Sbjct: 1 RGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRYLLGTTNLGLWYPKNM 60
Query: 201 NFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYISAAFCC 380
F+L GYSDSD+AG DRKSTSG+C F+G LVSW SKKQN V+LSTAEAEYI+A CC
Sbjct: 61 PFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYIAAGSCC 120
Query: 381 TQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRDCVSK 554
Q+LWMKQ L+DY S +++PI CDN SAIN+++NPV H+RTKHIEIRHHFLRD V K
Sbjct: 121 AQILWMKQQLSDYGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRDHVQK 178
>gb|KYP32199.1| Copia protein [Cajanus cajan]
Length = 252
Score = 269 bits (687), Expect = 1e-88
Identities = 128/184 (69%), Positives = 146/184 (79%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM +VKRI +YLKGT GL
Sbjct: 26 VDSSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLRD
Sbjct: 146 AAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>gb|KYP38353.1| Copia protein [Cajanus cajan]
Length = 252
Score = 268 bits (686), Expect = 2e-88
Identities = 128/184 (69%), Positives = 145/184 (78%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM VKRI +YLKGT GL
Sbjct: 26 VDNSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKCVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLRD
Sbjct: 146 AAGSCCAQILWMKQQLRDYGTELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>gb|KYP44163.1| Copia protein [Cajanus cajan]
Length = 252
Score = 268 bits (684), Expect = 4e-88
Identities = 127/184 (69%), Positives = 145/184 (78%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM +VKRI +YLKGT GL
Sbjct: 26 VDSSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW KKQ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHRKKQACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLRD
Sbjct: 146 AAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPIFHSRTKHIEIRHHFLRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]
Length = 334
Score = 270 bits (691), Expect = 5e-88
Identities = 128/184 (69%), Positives = 152/184 (82%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
V+ + YRGMIGSLLYLTASRPDI+++VCLCARFQS PKESH+S VKRI RYLKG + GL
Sbjct: 112 VNSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSVVKRILRYLKGIMDIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L GYS++++AG +RKSTSG+C FLG LVSW SKKQN V+LSTAEAEYI
Sbjct: 172 WYPKGDNFELIGYSNAEFAGCKVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+ CC Q+LWMKQTL+D+ FE+VPI CDN SAINI++NPV H+RTKHIEIRHHFLRD
Sbjct: 232 AVGLCCAQILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>emb|CAN67702.1| hypothetical protein VITISV_041588 [Vitis vinifera]
Length = 334
Score = 270 bits (690), Expect = 7e-88
Identities = 127/184 (69%), Positives = 151/184 (82%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSLLYLTASRP+I+++VCLCARFQS PKESH+S VKRI RYLKGT+ GL
Sbjct: 112 IDSTMYRGMIGSLLYLTASRPNIIYSVCLCARFQSCPKESHLSVVKRILRYLKGTMNIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L G+SD+D+ +RKSTSG+C FLG VSW SKKQN V+LS AEAEYI
Sbjct: 172 WYPKGDNFELIGFSDADFVDCRVERKSTSGTCHFLGHSFVSWHSKKQNSVALSMAEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQTL+D+ SFE+VPI CDN SAINI++NPV H+RTKHIEIRHHFLRD
Sbjct: 232 AAGLCCAQILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>gb|KYP31929.1| Copia protein [Cajanus cajan]
Length = 252
Score = 266 bits (681), Expect = 1e-87
Identities = 127/184 (69%), Positives = 146/184 (79%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ AVCLCARFQ+NPKESHM VKRI +YLKGT GL
Sbjct: 26 VDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKCVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTA+AEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAKAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLR+
Sbjct: 146 AAGSCCAQILWMKQQLRDYGTKLNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRN 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>emb|CAN67780.1| hypothetical protein VITISV_006406 [Vitis vinifera]
Length = 334
Score = 269 bits (688), Expect = 1e-87
Identities = 128/184 (69%), Positives = 153/184 (83%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D + YRGMIGSL+YLTASRPDI+++VCLCARFQS PKESH+SAVKRI RYLKGT+ GL
Sbjct: 112 IDSTMYRGMIGSLIYLTASRPDIMYSVCLCARFQSCPKESHLSAVKRILRYLKGTMNIGL 171
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK +NF L G+SD+++AG +RKSTSG+C FLG LVSW SKKQN V+LSTAEAEYI
Sbjct: 172 WYPKGDNFELIGFSDANFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYI 231
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A C Q+LWMKQTL+D+ SFE+ PI CDN SAINI++N V H+RTKHIEIRHHFLRD
Sbjct: 232 AAGLYCAQILWMKQTLSDFNLSFEHAPIKCDNTSAINISKNLVQHSRTKHIEIRHHFLRD 291
Query: 543 CVSK 554
K
Sbjct: 292 HAQK 295
>gb|KYP55105.1| Copia protein [Cajanus cajan]
Length = 495
Score = 274 bits (701), Expect = 2e-87
Identities = 130/184 (70%), Positives = 153/184 (83%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
+D KYRGMIGSLLYL+ASRPDI+ +VCLCAR+QSNPKESH+SAVKRI RYL GT GL
Sbjct: 268 IDVKKYRGMIGSLLYLSASRPDIMFSVCLCARYQSNPKESHLSAVKRIMRYLLGTTNLGL 327
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPKN F+L GYSDSD+AG DRKSTSG+C F+G LVSW SKKQN V+LSTAEAEYI
Sbjct: 328 WYPKNMPFNLVGYSDSDFAGCKTDRKSTSGTCHFIGSALVSWHSKKQNSVALSTAEAEYI 387
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L+D+ S +++PI CDN SAIN+++NPV H+RTKHIEIRHHFLRD
Sbjct: 388 AAGSCCAQILWMKQQLSDFGLSLDHIPIKCDNTSAINLSKNPVLHSRTKHIEIRHHFLRD 447
Query: 543 CVSK 554
V K
Sbjct: 448 HVQK 451
>gb|KYP34009.1| Copia protein [Cajanus cajan]
Length = 252
Score = 266 bits (679), Expect = 2e-87
Identities = 126/184 (68%), Positives = 146/184 (79%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM +VKRI +YLKGT GL
Sbjct: 26 VDSSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKK+ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKKACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHI+IRHHFLRD
Sbjct: 146 AAGSCCAQILWMKQQLRDYGVELSKIPLRCDNTSAINLTKNPILHSRTKHIKIRHHFLRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>gb|KYP36591.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 215
Score = 264 bits (675), Expect = 3e-87
Identities = 125/179 (69%), Positives = 143/179 (79%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ AVCLCARFQ+NPKESH+ +VKRI +YLKGT GL
Sbjct: 26 VDSSKYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHLKSVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLR 539
+ CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLR
Sbjct: 146 AVGSCCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLR 204
>gb|KYP78961.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 239
Score = 265 bits (677), Expect = 3e-87
Identities = 127/184 (69%), Positives = 145/184 (78%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ AVCLCARFQ+NPKESHM +VKRI +YLKGT GL
Sbjct: 24 VDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMRSVKRILKYLKGTTNVGL 83
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSD+AG DRK TSG+C LG LVSW SKKQ CV+LSTAEAEYI
Sbjct: 84 WYPKGVSLSLIGYSDSDFAGCRLDRKRTSGTCHLLGSALVSWHSKKQACVALSTAEAEYI 143
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFL+D
Sbjct: 144 AAGSCCAQILWMKQQLRDYGVELNKNPLRCDNTSAINLTKNPIFHSRTKHIEIRHHFLKD 203
Query: 543 CVSK 554
V K
Sbjct: 204 HVQK 207
>gb|KYP79054.1| Copia protein [Cajanus cajan]
Length = 252
Score = 265 bits (676), Expect = 7e-87
Identities = 126/184 (68%), Positives = 143/184 (77%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM +VKRI +YLKGT GL
Sbjct: 26 VDSSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTTNVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTAE EYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEVEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+RTKHIEIRHHFLRD
Sbjct: 146 VVGSCCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHHFLRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209
>gb|KYP31237.1| Copia protein [Cajanus cajan]
Length = 252
Score = 265 bits (676), Expect = 7e-87
Identities = 126/184 (68%), Positives = 144/184 (78%)
Frame = +3
Query: 3 VDESKYRGMIGSLLYLTASRPDILHAVCLCARFQSNPKESHMSAVKRIFRYLKGTIQYGL 182
VD SKYRG+IGSLLYLTASRPDI+ VCLCARFQ+NPKESHM +VKRI +YLKGTI GL
Sbjct: 26 VDNSKYRGIIGSLLYLTASRPDIMFVVCLCARFQANPKESHMKSVKRILKYLKGTINVGL 85
Query: 183 FYPKNENFSLKGYSDSDYAGNIDDRKSTSGSCQFLGDCLVSWFSKKQNCVSLSTAEAEYI 362
+YPK + SL GYSDSDYAG DRKSTSG+C LG LVSW SKKQ CV+LSTAEAEYI
Sbjct: 86 WYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAEAEYI 145
Query: 363 SAAFCCTQLLWMKQTLADYKCSFENVPIFCDNISAINIAQNPVHHNRTKHIEIRHHFLRD 542
+A CC Q+LWMKQ L DY +P+ CDN SAIN+ +NP+ H+R KHI IRHHF RD
Sbjct: 146 AAGSCCAQILWMKQQLRDYGAELNKIPLRCDNTSAINLTKNPILHSRKKHIVIRHHFFRD 205
Query: 543 CVSK 554
V +
Sbjct: 206 HVQR 209