BLASTX nr result

ID: Rehmannia29_contig00020287 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00020287
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN16971.1| Ubiquitin carboxyl-terminal hydrolase [Handroanth...    87   3e-16
ref|XP_011097488.1| ubiquitin carboxyl-terminal hydrolase 19 [Se...    86   1e-15
gb|PIN12517.1| Ubiquitin carboxyl-terminal hydrolase [Handroanth...    79   2e-13
gb|EYU30946.1| hypothetical protein MIMGU_mgv1a004116mg [Erythra...    68   2e-09
ref|XP_012845118.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    68   2e-09
ref|XP_022871318.1| ubiquitin carboxyl-terminal hydrolase 17-lik...    65   1e-08

>gb|PIN16971.1| Ubiquitin carboxyl-terminal hydrolase [Handroanthus impetiginosus]
          Length = 883

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 53/127 (41%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
 Frame = -1

Query: 663  SLVTNSSVHSDGRTKE------AISVAKKKNLKSKPNS---FTESIMLHQRPERHSYWTP 511
            SL+ N S+++DG+ K+      AI   KKKN KSK NS    TES  +HQ+ ERHS+WTP
Sbjct: 755  SLMMNDSMYADGKPKKSMEAISAIPSTKKKNSKSKSNSSDRHTESPTMHQQSERHSHWTP 814

Query: 510  PNDFTGNRIMDSEDWGFHS-NKNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGY 334
            PNDFT N I+  + W FHS +KNHIL                               SGY
Sbjct: 815  PNDFTSNHIVYPDGWEFHSKHKNHILDSSSDSSSIFSASDAGSYSTDSTKDSSADDISGY 874

Query: 333  IFGANFY 313
            IFG++ Y
Sbjct: 875  IFGSSLY 881


>ref|XP_011097488.1| ubiquitin carboxyl-terminal hydrolase 19 [Sesamum indicum]
          Length = 892

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
 Frame = -1

Query: 663  SLVTNSSVHSDG---RTKEAISV---AKKKNLKSKPNS---FTESIMLHQRPERHSYWTP 511
            SLVTNS+V+SDG   RT EAIS    AKKKN KS+ +    + +S M+HQR ERHSY  P
Sbjct: 764  SLVTNSNVYSDGKTTRTMEAISTSISAKKKNSKSRSSDSDWYRDSKMVHQRSERHSYQLP 823

Query: 510  PNDFTGNRIMDSEDWGFHSN-KNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGY 334
            PND+TGN I+  ++W FHSN +N ++                               SGY
Sbjct: 824  PNDYTGNNILGPDNWHFHSNHRNSMVDSSSDCSSIFSASDAGSYSTDSTKDSSAEDISGY 883

Query: 333  IFGANFY 313
            IFG++ Y
Sbjct: 884  IFGSSLY 890


>gb|PIN12517.1| Ubiquitin carboxyl-terminal hydrolase [Handroanthus impetiginosus]
          Length = 686

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
 Frame = -1

Query: 663 SLVTNSSVHSDGRTK---EAISV---AKKKNLKSKPNSF---TESIMLHQRPERHSYWTP 511
           + V NSSV+SDG+TK   EAIS     KKKN K+K +S    T+S + HQ P++H+ W  
Sbjct: 561 AFVWNSSVYSDGKTKRNTEAISSINNTKKKNSKTKLSSSGRNTDSTLSHQGPDKHTDWMT 620

Query: 510 PNDFTGNRIMDSEDWGFHSNKNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYI 331
           PNDF  N I+D E WG HS   HIL                               SGYI
Sbjct: 621 PNDFIDNHIVDPERWGLHS--KHILDSSSDSSSIFSASDAGSYSTDSTKDSSAEEISGYI 678

Query: 330 FGANFYRP 307
           FG+++YRP
Sbjct: 679 FGSSWYRP 686


>gb|EYU30946.1| hypothetical protein MIMGU_mgv1a004116mg [Erythranthe guttata]
          Length = 543

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
 Frame = -1

Query: 663 SLVTNSSVHSDGRTK---EAISVA---KKKNLKSKPNSF---TESIMLHQRPERHSYWTP 511
           S V NS+ +SDG+TK   EAIS +   KKKN KSKP+SF   TE  + HQRP+    W  
Sbjct: 423 SSVRNSTTYSDGKTKRSMEAISSSNNTKKKNPKSKPSSFNRNTEPTLPHQRPD----WMS 478

Query: 510 PNDFTGNRIMDSEDWGFHSNKNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYI 331
           PNDFTGN + D E W    ++N  +                               SGYI
Sbjct: 479 PNDFTGNHVTDPERW---LHRNPTVDSSSDSSSIFSVSDAGSYSTDSTKDSSADDISGYI 535

Query: 330 FGANFYRP 307
           FG ++Y P
Sbjct: 536 FGPSWYHP 543


>ref|XP_012845118.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Erythranthe
            guttata]
          Length = 848

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
 Frame = -1

Query: 663  SLVTNSSVHSDGRTK---EAISVA---KKKNLKSKPNSF---TESIMLHQRPERHSYWTP 511
            S V NS+ +SDG+TK   EAIS +   KKKN KSKP+SF   TE  + HQRP+    W  
Sbjct: 728  SSVRNSTTYSDGKTKRSMEAISSSNNTKKKNPKSKPSSFNRNTEPTLPHQRPD----WMS 783

Query: 510  PNDFTGNRIMDSEDWGFHSNKNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYI 331
            PNDFTGN + D E W    ++N  +                               SGYI
Sbjct: 784  PNDFTGNHVTDPERW---LHRNPTVDSSSDSSSIFSVSDAGSYSTDSTKDSSADDISGYI 840

Query: 330  FGANFYRP 307
            FG ++Y P
Sbjct: 841  FGPSWYHP 848


>ref|XP_022871318.1| ubiquitin carboxyl-terminal hydrolase 17-like [Olea europaea var.
           sylvestris]
          Length = 485

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 41/119 (34%), Positives = 53/119 (44%)
 Frame = -1

Query: 663 SLVTNSSVHSDGRTKEAISVAKKKNLKSKPNSFTESIMLHQRPERHSYWTPPNDFTGNRI 484
           SLV N+SV+SDG+TK  +      N   K    T+S  LH   ERH Y   PNDFT N I
Sbjct: 370 SLVRNNSVYSDGKTKRNMEAISSSNSGKKRIPKTKSETLHHWSERHHY---PNDFTDNHI 426

Query: 483 MDSEDWGFHSNKNHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGYIFGANFYRP 307
           +DS+ W  HS + + +                               S YIFG++ YRP
Sbjct: 427 LDSDGWRLHSMQGNHIMDSLSDSSSIFSISDASSSTDSTKDSSVEDLSDYIFGSSSYRP 485


Top