BLASTX nr result

ID: Rehmannia29_contig00019825 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00019825
         (603 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829324.1| PREDICTED: cyclin-D-binding Myb-like transcr...    83   5e-15
gb|PIN07874.1| RNA polymerase I termination factor, Myb superfam...    71   7e-11
ref|XP_012829315.1| PREDICTED: cylicin-1-like [Erythranthe guttata]    70   2e-10
gb|EYU17677.1| hypothetical protein MIMGU_mgv1a003135mg [Erythra...    69   3e-10
ref|XP_011101318.1| RNA polymerase I termination factor [Sesamum...    69   3e-10

>ref|XP_012829324.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1
           [Erythranthe guttata]
          Length = 627

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
 Frame = +1

Query: 1   KKKREKNRSQNDKFETGSSQEVEGNESEKRTEGESISGMXXXXXXXXXXXXXXXXINSED 180
           +KKREK++++N  FETG ++EVEG ES++ +EGES+SG                  N ++
Sbjct: 108 RKKREKDKNRNGMFETGINKEVEGKESKRWSEGESVSGTTCSKERKTKKPKR----NHDN 163

Query: 181 GEFKEEREIDGKEVETVTQSQNGEVHAMEMVEXXXXXXXXXXXXDD-------------E 321
           G+ ++E+E DG EV   T+ QN ++     VE            DD             E
Sbjct: 164 GDSEKEKE-DGNEVG--TRKQNSKI----PVERKKRKKEKIVSEDDNCWQESSDKAKHVE 216

Query: 322 GDISLLQQENVPGSVEGNIESTKHDGNAPXXXXXXXXXXXXXXXXXDDSCASQQDYIDND 501
           GD+S +Q+ENVP    GN+ES  + GNA                    +  S   +  N 
Sbjct: 217 GDLSSMQKENVP----GNVESVSYVGNATKELKRKKKKKKKSKERESFNADSVDKHTIN- 271

Query: 502 NNGLMHTDEIQSNELESANKR-KRKKTQVVENGSD 603
                  D+ Q + +E  NKR K+KK ++VEN SD
Sbjct: 272 -------DDTQIDGVEYGNKRKKKKKAELVENSSD 299


>gb|PIN07874.1| RNA polymerase I termination factor, Myb superfamily [Handroanthus
           impetiginosus]
          Length = 597

 Score = 71.2 bits (173), Expect = 7e-11
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
 Frame = +1

Query: 319 EGDISLLQQENVPGSVEGNIESTKHDGNAPXXXXXXXXXXXXXXXXXDDSCASQ----QD 486
           EGD+  LQQEN+P +VEGNIEST+ +  A                  D S   Q    +D
Sbjct: 99  EGDLVSLQQENLPENVEGNIESTECNETAMKKLERKKKHKKEKDYKVDSSAVQQDITMKD 158

Query: 487 YIDNDNNGLMHTDEIQSNELESANKRKRKKTQVVENGSD 603
             DN N  ++ +DEI+ NE E A++ KR+KT++VENGSD
Sbjct: 159 SEDNGNYPILLSDEIRYNEAEYASEGKRRKTKIVENGSD 197


>ref|XP_012829315.1| PREDICTED: cylicin-1-like [Erythranthe guttata]
          Length = 636

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
 Frame = +1

Query: 1   KKKREKNRSQNDKFETGSSQEVEGNESEKRTEGESISGMXXXXXXXXXXXXXXXXINSED 180
           +KKREKN+++ND  E  +  E +GNE +KR   ES SG                    E+
Sbjct: 115 RKKREKNKNKNDGLEMENGSEAKGNEGKKR---ESTSGTNSTKEASKERKKQKGKRKLEE 171

Query: 181 GEFKEEREIDGKEVETVTQSQNGEVHAMEMVEXXXXXXXXXXXXDDEGDISLLQQENVPG 360
            +F++E E D KE     Q++  +                      +GD+S LQ+EN P 
Sbjct: 172 VDFEKEGEKDVKEAGRDKQNKEKK-------------RKKDKQKSKDGDLSSLQKENAPD 218

Query: 361 SVEGNIE--STKHDGNAPXXXXXXXXXXXXXXXXXDDSCASQQDYIDNDNNGLMHTDEIQ 534
           +V+G+I+  S   +                     D S ASQQ+ +D D          +
Sbjct: 219 NVDGDIQPISDAENVTKEVKRKDKKENKKKENSKDDSSAASQQNSVDKDGT--------K 270

Query: 535 SNELESANKRKRKKTQVVENGSD 603
            ++ +   KRK+K T+ VEN SD
Sbjct: 271 KDKSKDGKKRKKKGTKSVENVSD 293


>gb|EYU17677.1| hypothetical protein MIMGU_mgv1a003135mg [Erythranthe guttata]
          Length = 605

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
 Frame = +1

Query: 1   KKKREKNRSQNDKFETGSSQEVEGNESEKRTEGESISGMXXXXXXXXXXXXXXXXINSED 180
           +KKREK++++N  FETG ++EVEG ES++ +EGES+SG                  N ++
Sbjct: 108 RKKREKDKNRNGMFETGINKEVEGKESKRWSEGESVSGTTCSKERKTKKPKR----NHDN 163

Query: 181 GEFKEEREIDGKEVETVTQSQNGEVHAMEMVEXXXXXXXXXXXXDD-------------E 321
           G+ ++E+E DG EV   T+ QN ++     VE            DD             E
Sbjct: 164 GDSEKEKE-DGNEVG--TRKQNSKI----PVERKKRKKEKIVSEDDNCWQESSDKAKHVE 216

Query: 322 GDISLLQQENVPGSVEGNIESTKHDGNAPXXXXXXXXXXXXXXXXXDDSCASQQDYIDND 501
           GD+S +Q+EN         ES   D +                         + + ++N 
Sbjct: 217 GDLSSMQKENKKKKKSKERESFNAD-SVDKHTINDDTQIDGVEYGNKRKKKKKAELVENS 275

Query: 502 NNGLMHTDEIQSNELESANKRKRKKTQVVENGSD 603
                 +D+ +  ++E A+K K++KT+ VEN SD
Sbjct: 276 ------SDDARDTQVEYASKGKKRKTKTVENDSD 303


>ref|XP_011101318.1| RNA polymerase I termination factor [Sesamum indicum]
          Length = 736

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/95 (43%), Positives = 53/95 (55%)
 Frame = +1

Query: 316 DEGDISLLQQENVPGSVEGNIESTKHDGNAPXXXXXXXXXXXXXXXXXDDSCASQQDYID 495
           DEG+ S LQQ+++P  VEGN  S  +DG+                       A QQ   D
Sbjct: 277 DEGNSSSLQQQHMPEDVEGNTLSNNYDGSVTKEHERKKK----------SKTADQQYSAD 326

Query: 496 NDNNGLMHTDEIQSNELESANKRKRKKTQVVENGS 600
           ND+N LM TDE Q+NE+  ANK K+KK ++VENGS
Sbjct: 327 NDSNCLMCTDERQNNEVVDANKGKKKKIELVENGS 361


Top