BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00019792
         (2738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012850949.1| PREDICTED: uncharacterized protein LOC105970...  1006   0.0  
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      929   0.0  
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      927   0.0  
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      926   0.0  
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      926   0.0  
gb|PNY10358.1| retrotransposon-related protein, partial [Trifoli...   904   0.0  
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      914   0.0  
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      913   0.0  
dbj|GAU46010.1| hypothetical protein TSUD_401320 [Trifolium subt...   900   0.0  
gb|PRQ19613.1| putative RNA-directed DNA polymerase [Rosa chinen...   883   0.0  
gb|PNX92161.1| retrotransposon-related protein, partial [Trifoli...   882   0.0  
gb|PRQ42351.1| putative RNA-directed DNA polymerase [Rosa chinen...   887   0.0  
gb|PNY16758.1| gag-pol polyprotein [Trifolium pratense]               840   0.0  
dbj|GAU42103.1| hypothetical protein TSUD_134870 [Trifolium subt...   844   0.0  
dbj|GAU43338.1| hypothetical protein TSUD_398830 [Trifolium subt...   838   0.0  
ref|XP_012849593.1| PREDICTED: uncharacterized protein LOC105969...   834   0.0  
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo...   803   0.0  
gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo...   786   0.0  
gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo...   786   0.0  
ref|XP_019173231.1| PREDICTED: uncharacterized protein LOC109168...   784   0.0  

>ref|XP_012850949.1| PREDICTED: uncharacterized protein LOC105970659 [Erythranthe guttata]
          Length = 1523

 Score = 1006 bits (2602), Expect = 0.0
 Identities = 490/773 (63%), Positives = 598/773 (77%), Gaps = 9/773 (1%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNRTLQEMARVM+ +K I+ RFWAEA+NTACHI NRVYLRPG+T T YEI  
Sbjct: 782  QQNGVVERKNRTLQEMARVMMNAKEIAPRFWAEAVNTACHIINRVYLRPGTTKTPYEIWK 841

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            GKKP L Y   FGC CYILNDRE LGKFD +SD+G+FLGYS+NSHAYRI+NLRT+++ E+
Sbjct: 842  GKKPQLNYLRTFGCTCYILNDREQLGKFDARSDQGIFLGYSRNSHAYRIFNLRTKSVMES 901

Query: 2378 VNAVFDDLSILG------NKSEDENIADVIDSIILQKPASVVCDSQGV---TGGETTPQP 2226
                FDD +         +  E EN + V  ++     AS + +   V   TG E   +P
Sbjct: 902  AYVQFDDFNNDAGPLEEESTKESENSSSVAPTVPTVDAASTISEESDVNSETGDEAEVRP 961

Query: 2225 TPVLDTXXXXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLN 2046
              + D                      ++P R+++K+HP  +VIG V + I+TR K ++N
Sbjct: 962  LELDDQ-------------------THKEPSRRVKKNHPVDKVIGPVEEGIQTRGKPKVN 1002

Query: 2045 YRDMVRPSFFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLV 1866
            Y++M R              CF S IEPKNV EAL DE+W+ AMHEEL QF+RNDVW LV
Sbjct: 1003 YKEMAR------------YVCFTSTIEPKNVKEALLDEYWVQAMHEELEQFVRNDVWVLV 1050

Query: 1865 PRPDNVNVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRL 1686
            PRPDNVN+IGTKW+FKNKSDEHGNIVRNKARLVAQGY+Q+EG+D+DETFAPVARLES+RL
Sbjct: 1051 PRPDNVNIIGTKWVFKNKSDEHGNIVRNKARLVAQGYSQIEGIDFDETFAPVARLESVRL 1110

Query: 1685 LLCVACSLDLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQA 1506
            LL +AC L +KL+QMDVKSAFLNG L EEVYVEQPKGFQDPH P  VFKL KALYGLKQA
Sbjct: 1111 LLAIACFLKIKLFQMDVKSAFLNGILKEEVYVEQPKGFQDPHHPKHVFKLNKALYGLKQA 1170

Query: 1505 PRAWYERLADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVN 1326
            PRAWYERL +FL   G+ RG VD+TLF KK +  + IAQ+YVDDIVFGST  +  ++FV 
Sbjct: 1171 PRAWYERLTEFLSHKGYTRGSVDRTLFFKKSKGDILIAQIYVDDIVFGSTSQTKIEEFVK 1230

Query: 1325 SMSSTFEMSLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQ 1146
             MSS FEMS+VGEL +FLGLQ++Q+ DGIF++Q KYAKNLVK FGL+++K +RTPM T+ 
Sbjct: 1231 QMSSEFEMSMVGELTYFLGLQVKQMSDGIFITQSKYAKNLVKCFGLESAKTVRTPMGTND 1290

Query: 1145 KLCRDEVSEGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIK 966
            KL R   +  VD TLYRSMIGSLLYLT+SRPD+ +SV VCARYQS+PK  HL+AVKRII+
Sbjct: 1291 KLSRQLDATAVDPTLYRSMIGSLLYLTSSRPDICYSVGVCARYQSNPKECHLSAVKRIIR 1350

Query: 965  YVSGSADLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCV 786
            YVSG+ D G+WY+ DTNT L GFSD+DWA D +DRKST+GGCFYLGNNLVSWYS+KQ+ +
Sbjct: 1351 YVSGTTDFGIWYSMDTNTTLAGFSDADWASDADDRKSTTGGCFYLGNNLVSWYSKKQNSI 1410

Query: 785  SLSTAESEYVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKH 606
            SLSTAESEY+AAGSCCAQL+WMKQM+ DYGIS D+L +YCDN+SAI+IS+NPVQHSRTKH
Sbjct: 1411 SLSTAESEYIAAGSCCAQLLWMKQMVCDYGISQDLLHIYCDNMSAINISKNPVQHSRTKH 1470

Query: 605  IDIRHHFIRDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVL 447
            I+IR+HFIR+LVE+G + +++V+TE Q+ADI TK LD +RF SLR SLG+C++
Sbjct: 1471 IEIRYHFIRNLVEEGTVSLEYVTTEKQLADIFTKPLDAQRFDSLRNSLGICIV 1523


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  929 bits (2400), Expect = 0.0
 Identities = 456/765 (59%), Positives = 566/765 (73%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE ARVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 851  QQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 910

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP++K+FH+FG  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 911  GRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 970

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DDLS    K  +E++  + D++           +     GE         D    
Sbjct: 971  INVVVDDLSPARKKDVEEDVRTLGDNV-----------ADAAKSGENAENSDSATD---- 1015

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                      + N+    +    +IQK HP   +IG+ +  + TR +E            
Sbjct: 1016 ----------ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------------ 1053

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                  +VS +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NVI
Sbjct: 1054 ----VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVI 1109

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAPVARLESIRLLL VAC L 
Sbjct: 1110 GTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILK 1169

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KLYQMDVKSAFLNG+LNEEVYVEQPKGF DP  P+ V++LKKALYGLKQAPRAWYERL 
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1229

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEMS
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMS 1289

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL +FLGLQ++Q+ D IF+SQ +YAKN+VKKFG++N+ H RTP  T  KL +DE   
Sbjct: 1290 LVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGT 1349

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD +LYRSMIGSLLYLTASRPD+ ++V VCARYQ++PKI+HL  VKRI+KYV+G++D G
Sbjct: 1350 SVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYG 1409

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            + Y   +N  LVG+ D+DWAG  +DRKSTSGGCFYLGNNL+SW+S+KQ+CVSLSTAE+EY
Sbjct: 1410 IMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEY 1469

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+QL+WMKQML +Y +  D++T+YCDN+SAI+IS+NPVQHSRTKHIDIRHH+IR
Sbjct: 1470 IAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIR 1529

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            DLV+  +I + HV TE QIADI TK+LD  +F  LR  LG+C+L+
Sbjct: 1530 DLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLLE 1574


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  927 bits (2397), Expect = 0.0
 Identities = 456/765 (59%), Positives = 565/765 (73%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE ARVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 849  QQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 908

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP++K+FH+FG  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 909  GRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 968

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DDLS    K  +E++    D++           +     GE         D    
Sbjct: 969  INVVVDDLSPARKKDVEEDVRTSGDNV-----------ADAAKSGENAENSDSATD---- 1013

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                      + N+    +    +IQK HP   +IG+ +  + TR +E            
Sbjct: 1014 ----------ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------------ 1051

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                  +VS +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NVI
Sbjct: 1052 ----VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVI 1107

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAPVARLESIRLLL VAC L 
Sbjct: 1108 GTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILK 1167

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KLYQMDVKSAFLNG+LNEEVYVEQPKGF DP  P+ V++LKKALYGLKQAPRAWYERL 
Sbjct: 1168 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1227

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEMS
Sbjct: 1228 EFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMS 1287

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL +FLGLQ++Q+ D IF+SQ +YAKN+VKKFG++N+ H RTP  T  KL +DE   
Sbjct: 1288 LVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGT 1347

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD +LYRSMIGSLLYLTASRPD+ ++V VCARYQ++PKI+HL  VKRI+KYV+G++D G
Sbjct: 1348 SVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYG 1407

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            + Y   +N  LVG+ D+DWAG  +DRKSTSGGCFYLGNNL+SW+S+KQ+CVSLSTAE+EY
Sbjct: 1408 IMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEY 1467

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+QL+WMKQML +Y +  D++T+YCDN+SAI+IS+NPVQHSRTKHIDIRHH+IR
Sbjct: 1468 IAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIR 1527

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            DLV+  +I + HV TE QIADI TK+LD  +F  LR  LG+C+L+
Sbjct: 1528 DLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLLE 1572


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  926 bits (2394), Expect = 0.0
 Identities = 457/766 (59%), Positives = 567/766 (74%), Gaps = 1/766 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE ARVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 852  QQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 911

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP +K+FH+FG  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 912  GRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 971

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSII-LQKPASVVCDSQGVTGGETTPQPTPVLDTXX 2202
            +N V DDL+    K  +E++    D++    K A    +S   T      QP        
Sbjct: 972  INVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQP-------- 1023

Query: 2201 XXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPS 2022
                               + P  +IQK HP   +IG+ +  + TR +E           
Sbjct: 1024 ------------------DKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----------- 1054

Query: 2021 FFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNV 1842
                   +VS +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NV
Sbjct: 1055 -----IEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNV 1109

Query: 1841 IGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSL 1662
            IGTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAPVARLESIRLLL VAC L
Sbjct: 1110 IGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACIL 1169

Query: 1661 DLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERL 1482
              KLYQMDVKSAFLNG+LNEE YVEQPKGF DP  P+ V++LKKALYGLKQAPRAWYERL
Sbjct: 1170 KFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERL 1229

Query: 1481 ADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEM 1302
             +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEM
Sbjct: 1230 TEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEM 1289

Query: 1301 SLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVS 1122
            SLVGEL +FLGLQ++Q+ D IF+SQ KYAKN+VKKFG++N+ H RTP  T  KL +DE  
Sbjct: 1290 SLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAG 1349

Query: 1121 EGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADL 942
              VD +LYRSMIGSLLYLTASRPD+ ++V VCARYQ++PKI+HLN VKRI+KYV+G++D 
Sbjct: 1350 TSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDY 1409

Query: 941  GLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESE 762
            G+ Y   + + LVG+ D+DWAG  +DRKSTSGGCFYLGNNL+SW+S+KQ+CVSLSTAE+E
Sbjct: 1410 GIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAE 1469

Query: 761  YVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFI 582
            Y+AAGS C+QL+WMKQML +Y +  D++T+YCDN+SAI+IS+NPVQHSRTKHIDIRHH+I
Sbjct: 1470 YIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYI 1529

Query: 581  RDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            R+LV+  +I ++HV TE QIADI TK+LD ++F  LR  LG+C+L+
Sbjct: 1530 RELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLGICLLE 1575


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  926 bits (2394), Expect = 0.0
 Identities = 456/765 (59%), Positives = 565/765 (73%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE ARVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 851  QQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 910

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP++K+FH+FG  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 911  GRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 970

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DDLS    K  +E++    D++           +     GE         D    
Sbjct: 971  INVVVDDLSPARKKDVEEDVRTSGDNV-----------ADAAKSGENAENSDSATD---- 1015

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                      + N+    +    +IQK HP   +IG+ +  + TR +E            
Sbjct: 1016 ----------ESNINQPDKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------------ 1053

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                  +VS +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NVI
Sbjct: 1054 ----VEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVI 1109

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAPVARLESIRLLL VAC L 
Sbjct: 1110 GTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILK 1169

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KLYQMDVKSAFLNG+LNEEVYVEQPKGF DP  P+ V++LKKALYGLKQAPRAWYERL 
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLT 1229

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEMS
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMS 1289

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL +FLGLQ++Q+ D IF+SQ +YAKN+VKKFG++N+ H RTP  T  KL +DE   
Sbjct: 1290 LVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGT 1349

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD   YRSMIGSLLYLTASRPD+ ++V VCARYQ++PKI+HLN VKRI+KYV+G++D G
Sbjct: 1350 SVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYG 1409

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            + Y   +++ LVG+ D+DWAG  +DRKSTSGGCFYLGNNL+SW+S+KQ+CVSLSTAE+EY
Sbjct: 1410 IMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEY 1469

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+QL+WMKQML +Y +  D++T+YCDN+SAI+IS+NPVQHSRTKHIDIRHH+IR
Sbjct: 1470 IAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIR 1529

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            DLV+  +I + HV TE QIADI TK+LD  +F  LR  LG+CVL+
Sbjct: 1530 DLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICVLE 1574


>gb|PNY10358.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1208

 Score =  904 bits (2335), Expect = 0.0
 Identities = 451/765 (58%), Positives = 556/765 (72%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNRT+QE ARVML +KN+   FWAEA+NTAC+I NRV LR G+  T YE+  
Sbjct: 485  QQNGVVERKNRTIQESARVMLHAKNLPLYFWAEAMNTACYIHNRVTLRKGTDKTLYELWK 544

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
             KKP +KYFHVFG  CYIL DRE   K DPKSD+G+FLGYS NS AYR++N RTRTI E+
Sbjct: 545  DKKPTVKYFHVFGSKCYILADREPRRKLDPKSDEGIFLGYSINSRAYRVFNSRTRTIMES 604

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DD S       + N+A ++      +P +V      +    T             
Sbjct: 605  INVVIDD-SAEEMSDAETNVATLVPIPEESEPETVAAQDSDMNESNT------------- 650

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                          V   + P  + QK+HP   VIG+    I TRR   +          
Sbjct: 651  ------------EAVKPSKGPSIRTQKNHPLDLVIGDPKQGITTRRSNDV---------- 688

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                   +S ACF+S IEPKNV EAL DE+WINAM EEL QF R++VWDLVPRP++VNVI
Sbjct: 689  -------ISNACFISKIEPKNVKEALTDEYWINAMQEELTQFKRSEVWDLVPRPEDVNVI 741

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKW++KNK+DE+G I RNKARLVAQGYTQ+EGVD+DE FAPVARLESIRLLL VAC L 
Sbjct: 742  GTKWVYKNKTDENGTITRNKARLVAQGYTQIEGVDFDEIFAPVARLESIRLLLAVACILK 801

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KLYQMDVKSAFLNG+LNEEVYVEQPKGF DP  PN V+KLKKALYGLKQAPRAWYERL 
Sbjct: 802  FKLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPNHVYKLKKALYGLKQAPRAWYERLT 861

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FLV  G+K+GG DKTLF+K     + IAQ+YVDDIVFG     + + FV  M S FEMS
Sbjct: 862  EFLVNQGYKKGGHDKTLFMKDVEGKLMIAQIYVDDIVFGGMSRQMVEHFVKQMQSEFEMS 921

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL +FLGLQ+RQ+ D IFVSQ KYAKN+VKKFG++   H RTP  T  KL +DE   
Sbjct: 922  LVGELTYFLGLQVRQMEDSIFVSQEKYAKNIVKKFGMEGGSHKRTPAPTHLKLTKDEKGI 981

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD +LYRSMIGSLLYLTASRPD+MF+V VCARYQ+  K++HL  VKRI KYV+ + + G
Sbjct: 982  DVDQSLYRSMIGSLLYLTASRPDIMFAVGVCARYQASHKMSHLAQVKRIFKYVNDTCNYG 1041

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            + Y+   ++ LVG+ D+DWAG ++DRKSTSG CF+LGNNLVSW+S+KQ+ VSLSTAE+EY
Sbjct: 1042 ILYSHTEDSTLVGYCDADWAGSVDDRKSTSGACFFLGNNLVSWFSKKQNSVSLSTAEAEY 1101

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+QL+WM+QML +Y +  +++T+YCDNLSAI+IS+NP+QHSRTKHIDIRHHFIR
Sbjct: 1102 IAAGSSCSQLLWMRQMLSEYNVEQNVMTLYCDNLSAINISKNPIQHSRTKHIDIRHHFIR 1161

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            DLVE+ ++ ++H+++E Q+ADI TK+LD  +F  LR  LG+C+ +
Sbjct: 1162 DLVEEKIVTLEHIASEEQLADIFTKALDANQFEKLRGKLGICLFE 1206


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  914 bits (2363), Expect = 0.0
 Identities = 452/766 (59%), Positives = 562/766 (73%), Gaps = 1/766 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE ARVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 825  QQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 884

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP +K+FH+ G  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 885  GRKPTVKHFHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 944

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSII-LQKPASVVCDSQGVTGGETTPQPTPVLDTXX 2202
            +N V DDL+    K  +E++    D++    K A    +S   T      QP        
Sbjct: 945  INVVVDDLTPARKKDVEEDVRTSGDNVADTAKSAENAENSDSATDEPNINQP-------- 996

Query: 2201 XXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPS 2022
                               + P  +IQK HP   +IG+ +  + TR +E           
Sbjct: 997  ------------------DKRPSIRIQKMHPKELIIGDPNRGVTTRSRE----------- 1027

Query: 2021 FFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNV 1842
                   ++S +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NV
Sbjct: 1028 -----IEIISNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNV 1082

Query: 1841 IGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSL 1662
            IGTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAP ARLESIRLLL VAC L
Sbjct: 1083 IGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVACIL 1142

Query: 1661 DLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERL 1482
              KLYQMDVKSAFLNG+LNEE YVEQPKGF DP  P+ V++LKKALYGLKQAPRAWYERL
Sbjct: 1143 KFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERL 1202

Query: 1481 ADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEM 1302
             +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEM
Sbjct: 1203 TEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEM 1262

Query: 1301 SLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVS 1122
            SLVGEL +FLGLQ++Q+ D IF+SQ KYAKN+VKKFG++N+ H RTP  T  KL +DE  
Sbjct: 1263 SLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAG 1322

Query: 1121 EGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADL 942
              VD +LYRSMIGSLLYLTASRPD+ ++V  CARYQ++PKI+HLN VKRI+KYV+G++D 
Sbjct: 1323 TSVDQSLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDY 1382

Query: 941  GLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESE 762
            G+ Y   +++ LVG+ D+DWAG ++DRKST GGCFYLG N +SW+S+KQ+CVSLSTAE+E
Sbjct: 1383 GIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLSTAEAE 1442

Query: 761  YVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFI 582
            Y+AAGS C+QL+WMKQML +Y +  D++T+YCDNLSAI+IS+NPVQHSRTKHIDIRHH+I
Sbjct: 1443 YIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPVQHSRTKHIDIRHHYI 1502

Query: 581  RDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            RDLV+  +I ++HV TE QIADI TK+LD  +F  LR  LG+C+L+
Sbjct: 1503 RDLVDDKVITLEHVDTEEQIADIFTKALDANQFEKLRGKLGICLLE 1548


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  913 bits (2360), Expect = 0.0
 Identities = 449/765 (58%), Positives = 563/765 (73%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+ ERKNRTLQE  RVML +K +    WAEA+NTAC+I NRV LR G+  T YEI  
Sbjct: 851  QQNGIVERKNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWK 910

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            G+KP +K+FH+FG  CYIL DRE   K DPKSD G+FLGYS NS AYR++N RTRT+ E+
Sbjct: 911  GRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMES 970

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DDL+    K  +E++    D++     A     ++     ++T            
Sbjct: 971  INVVVDDLTPARKKDVEEDVRTSEDNV-----ADTAKSAENAEKSDSTTD---------- 1015

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                      + N+    + P  +IQK  P   +IG+ +  + TR +E            
Sbjct: 1016 ----------EPNINQPDKSPFIRIQKMQPKELIIGDPNRGVTTRSRE------------ 1053

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                  +VS +CFVS IEPKNV EAL DEFWINAM EEL QF RN+VW+LVPRP+  NVI
Sbjct: 1054 ----IEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVI 1109

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKWIFKNK++E G I RNKARLVAQGYTQ+EGVD+DETFAPVARLESIRLLL VAC L 
Sbjct: 1110 GTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILK 1169

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KLYQMDVKSAFLNG+LNEE YVEQPKGF DP   + V++LKKALYGLKQAPRAWYERL 
Sbjct: 1170 FKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWYERLT 1229

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FL Q G+++GG+DKTLF+K+D  ++ IAQ+YVDDIVFG   + +   FV  M S FEMS
Sbjct: 1230 EFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMS 1289

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL++FLGLQ++Q+ D IF+SQ KYAKN+VKKFG++N+ H RTP  T  KL +DE   
Sbjct: 1290 LVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGT 1349

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD  LYRSMIGSLLYLTASRPD+ F+V VCARYQ++PKI+HLN VKRI+KYV+G++D G
Sbjct: 1350 SVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNGTSDYG 1409

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            + Y   +++ LVG+ D+DWAG  +DRK TSGGCFYLG NL+SW+S+KQ+CVSLSTAE+EY
Sbjct: 1410 IMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLSTAEAEY 1469

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+QL+WMKQML +Y +  D++T+YCDN+SAI+IS+NPVQH+RTKHIDIRHH+IR
Sbjct: 1470 IAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIR 1529

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            DLV+  +I ++HV TE Q+ADI TK+LD  +F  LR  LG C+L+
Sbjct: 1530 DLVDDKIITLEHVDTEEQVADIFTKALDANQFEKLRGKLGTCLLE 1574


>dbj|GAU46010.1| hypothetical protein TSUD_401320 [Trifolium subterraneum]
          Length = 1458

 Score =  900 bits (2327), Expect = 0.0
 Identities = 449/777 (57%), Positives = 555/777 (71%), Gaps = 12/777 (1%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNRTLQE AR ML  K +S  FWAEA+NTAC+I NRV LR G+T T YE+  
Sbjct: 721  QQNGVVERKNRTLQEYARAMLHGKKLSYSFWAEAMNTACYIHNRVTLRSGTTSTLYELWK 780

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
             +KP +KYFHVFG  CYIL DRE   K DPKSD+G+FLGYS NS +YR+YN RT+ + E+
Sbjct: 781  NRKPTVKYFHVFGSKCYILTDREQRRKLDPKSDEGIFLGYSTNSRSYRVYNSRTKVMMES 840

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DD       S +    DV D            D   +   +     T ++     
Sbjct: 841  INVVIDD-------SAEGRTTDVADDATTSDKQF---DETNLLKEDDNNMDTSIITNSTS 890

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                             ++ P  ++QK+HP   +IG+ S  I TR K  +          
Sbjct: 891  DLS--------------KKGPSIRVQKNHPQELIIGDPSQGIATRSKNDV---------- 926

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                   VS ACFVS IEP+NV EAL DE+WINAM EEL QF RN+VWDLVPRP+NVNVI
Sbjct: 927  -------VSNACFVSKIEPRNVKEALTDEYWINAMQEELGQFKRNEVWDLVPRPENVNVI 979

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKW++KNKSDE+GN+ RNKARLVAQGY Q+EGVD+DETFAPVA LESIRLLL VAC L 
Sbjct: 980  GTKWVYKNKSDENGNVTRNKARLVAQGYAQIEGVDFDETFAPVAHLESIRLLLGVACILK 1039

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             +L+QMDVKSAFLNG+LNEEVYVEQPKGF DP  PN V+KLKKALYGLKQAPRAWYERL 
Sbjct: 1040 FELFQMDVKSAFLNGYLNEEVYVEQPKGFVDPSLPNHVYKLKKALYGLKQAPRAWYERLT 1099

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
            +FL+  G+++GG DKTLF+K++   + IAQ+YVDDI+FG     +   FV  M S FEMS
Sbjct: 1100 EFLLSQGYRKGGNDKTLFVKEEEGKLIIAQIYVDDIIFGGMSGQMVQHFVQQMQSEFEMS 1159

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            LVGEL +FLGLQ++Q+ + IFVSQ KYAKN+VKKFG D  KH RTP  T  KL +D    
Sbjct: 1160 LVGELTYFLGLQVKQMSNCIFVSQSKYAKNIVKKFGQDGGKHKRTPAATHLKLTKDPNGV 1219

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFS--VC----------VCARYQSDPKITHLNAVKR 975
             VD +LY+SMIGSLLYLTASRPD+ F+  VC          VCARYQ++PKI+HL  VKR
Sbjct: 1220 DVDQSLYKSMIGSLLYLTASRPDITFAVGVCARPDITFAVGVCARYQAEPKISHLTQVKR 1279

Query: 974  IIKYVSGSADLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQ 795
            I+KYV+G  D G+ YT   +T L+G+ D+DWAG  +DRKSTSG CF+LGNNL+SW+S+KQ
Sbjct: 1280 ILKYVNGMCDYGILYTHGESTTLIGYCDADWAGSADDRKSTSGACFFLGNNLISWFSKKQ 1339

Query: 794  SCVSLSTAESEYVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSR 615
            +C+SLSTAE+EY+ AGS C+QL+WMKQML +Y +  D++T+YCDNLSAI+IS+NP+QHSR
Sbjct: 1340 NCISLSTAEAEYITAGSSCSQLLWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPIQHSR 1399

Query: 614  TKHIDIRHHFIRDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCVLK 444
            TKHIDIRHHFIR LVE+ +I ++HV+T+ Q+ADI TK+LD  +F  LR  LG+C+ +
Sbjct: 1400 TKHIDIRHHFIRGLVEEKVITLEHVTTDEQLADIFTKALDAVQFEKLRSKLGVCLFE 1456


>gb|PRQ19613.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1077

 Score =  883 bits (2282), Expect = 0.0
 Identities = 444/766 (57%), Positives = 557/766 (72%), Gaps = 4/766 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNR L EM RVML S  ++  FWAEA++ AC+  NRV  RPG+  T YEIL 
Sbjct: 331  QQNGVVERKNRVLIEMGRVMLNSAGLAHTFWAEAISNACYTINRVIFRPGTEKTPYEILK 390

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            GKKPN+ +  VF   CYI  DRE L KFD KSDKG FLGYS NS AYR+YN RT ++ ET
Sbjct: 391  GKKPNVSHLRVFRSPCYIYRDREYLAKFDAKSDKGFFLGYSLNSRAYRVYNKRTCSVMET 450

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N   DD  +L +           D ++  K  +   D   V G E       + DT   
Sbjct: 451  INVFIDDSIVLSHTP-----CISFDQVLFDKEKN---DEVIVEGQEDEEASVGIDDTSA- 501

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                         + PV R   +++ KDH ++ +IG+++D ++TRR+ R    ++   S 
Sbjct: 502  -------------IQPVYRTGQQQVHKDHSSSDIIGDLNDGLKTRRQARRAVSNLSILSC 548

Query: 2018 F----SSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDN 1851
            F         +++   FVS IEPKN  EAL D  WINAM +EL+QF RNDVW LVPRP++
Sbjct: 549  FIAKHQEDISIITFYGFVSVIEPKNAKEALCDVNWINAMQDELSQFARNDVWYLVPRPNS 608

Query: 1850 VNVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVA 1671
             NVIGTKWIFKNKSDE G I RNKARLVAQGY+QVEG+D+DETFAPVARLES+RLL  +A
Sbjct: 609  SNVIGTKWIFKNKSDEKGQITRNKARLVAQGYSQVEGLDFDETFAPVARLESVRLLFAIA 668

Query: 1670 CSLDLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWY 1491
            C L   LYQMDVKSAFLNG L EEVYVEQP GF DP  P+ V++LKKALYGLKQAPRAWY
Sbjct: 669  CHLRFTLYQMDVKSAFLNGVLQEEVYVEQPAGFIDPIHPDHVYRLKKALYGLKQAPRAWY 728

Query: 1490 ERLADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSST 1311
            ERL+  L+   + RG +DKTLF+K+  HH+ +AQVYVDDIVFGST DSL ++F N M + 
Sbjct: 729  ERLSSHLLDKDYVRGSIDKTLFVKRTSHHLILAQVYVDDIVFGSTSDSLIEEFTNIMKNE 788

Query: 1310 FEMSLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRD 1131
            FEMSL G+LN+FLGLQ++Q  DG+++SQ KYA +LVKKFGLD +  +R PM TS KL  D
Sbjct: 789  FEMSLCGKLNYFLGLQVQQRSDGLYISQTKYANDLVKKFGLDAATAVRNPMGTSSKLDVD 848

Query: 1130 EVSEGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGS 951
                 VD TLYRSMIGSLLYLTASRPD+ FSV VCARYQ++PK +HL AVKRII+YVSG+
Sbjct: 849  LTGISVDQTLYRSMIGSLLYLTASRPDISFSVGVCARYQANPKESHLKAVKRIIRYVSGT 908

Query: 950  ADLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTA 771
            ++ G+ YT D+N    G++DSDWAG+++DR+STSGGCF++GNNLVSW+S+KQ+CVSL TA
Sbjct: 909  SNYGVVYTFDSNVEFAGYTDSDWAGNVDDRRSTSGGCFFVGNNLVSWHSKKQNCVSLPTA 968

Query: 770  ESEYVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRH 591
            E+EY+AAGSCC Q++WMKQ+L+DYG     L+++CDN SAI+IS+NPVQHSRTKHIDIR+
Sbjct: 969  EAEYIAAGSCCTQMLWMKQILNDYGFPQGKLSIFCDNTSAINISKNPVQHSRTKHIDIRY 1028

Query: 590  HFIRDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLC 453
            HFIRDLV+  ++ ++ + TENQ+A++ TK LD  RF SLRKS+G+C
Sbjct: 1029 HFIRDLVDANILELEFIPTENQLANLFTKPLDNLRFESLRKSIGVC 1074


>gb|PNX92161.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1303

 Score =  882 bits (2278), Expect = 0.0
 Identities = 438/763 (57%), Positives = 551/763 (72%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNG+AERKNRT+QE ARVML +K +   FWAEA+NTAC+I NRV +R G++ T YEI  
Sbjct: 580  QQNGIAERKNRTIQESARVMLHAKQMPYHFWAEAMNTACYIHNRVTIRKGTSCTLYEIWR 639

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            GKKPN+ YFH+FG  CYIL DR+   K DPK ++G+FLGYS N+ AYR+YN RT+ I E+
Sbjct: 640  GKKPNVSYFHIFGSKCYILLDRDPRRKMDPKGEEGIFLGYSSNNRAYRVYNNRTKVIIES 699

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXX 2199
            +N V DD  I            V  +    + A    D   V   E T    P  +    
Sbjct: 700  INVVVDDAPIAMTHDVPLAAPSVPQASFEFEEADPQFDESNV---EVTKVQQPTNN---- 752

Query: 2198 XXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSF 2019
                              R P  +IQK+HP   +IG++   + TR +E            
Sbjct: 753  ------------------RGPSIRIQKNHPPDAIIGQLERGVTTRSRE------------ 782

Query: 2018 FSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVI 1839
                  ++S +CFVS IEPKNV EAL DE+WI+AM EEL QF RN+VWDLVPRP N+NVI
Sbjct: 783  ------VISNSCFVSKIEPKNVKEALLDEYWIHAMQEELTQFERNEVWDLVPRPKNINVI 836

Query: 1838 GTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLD 1659
            GTKWIFKNKS+E+G + RNKARLVAQG+TQ+EGVD+ ETFAPVARLESIRLLL +AC L 
Sbjct: 837  GTKWIFKNKSNENGEVTRNKARLVAQGFTQIEGVDFGETFAPVARLESIRLLLAIACILK 896

Query: 1658 LKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLA 1479
             KL+QMDVKSAFLNG+L+EEVYVEQPKGF DP +P+ V+KLKKALYGLKQAPRAWYERL 
Sbjct: 897  FKLFQMDVKSAFLNGYLHEEVYVEQPKGFIDPFQPSHVYKLKKALYGLKQAPRAWYERLT 956

Query: 1478 DFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMS 1299
             FL+  G+++GG DKTLF+K++   + IAQ+YVDDIVFG     +   FV  M + FEMS
Sbjct: 957  IFLISNGYRKGGNDKTLFVKEEEGKLLIAQIYVDDIVFGGMAGHMVKQFVEHMQTEFEMS 1016

Query: 1298 LVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSE 1119
            +VGEL FFLGLQI Q+ D  F+SQ KYAKN+VKKFGL+++ H +TP  T  KL +D+   
Sbjct: 1017 MVGELTFFLGLQINQMEDTTFLSQSKYAKNMVKKFGLESAGHKKTPAPTHLKLTKDDQGV 1076

Query: 1118 GVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLG 939
             VD ++YRSMIGSLLYLTASRP + F+V VCARYQ+DPK +HL  VKRI+KYVSG+ D G
Sbjct: 1077 SVDPSMYRSMIGSLLYLTASRPAIAFAVGVCARYQADPKASHLLQVKRILKYVSGTCDYG 1136

Query: 938  LWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEY 759
            L YT    +N+VG+ D+DWAG  +DRKSTSGGCF+LG NL+SW+S+KQ+ V+LST E+EY
Sbjct: 1137 LMYTHGGGSNMVGYCDADWAGSADDRKSTSGGCFFLGCNLISWFSKKQNSVALSTTEAEY 1196

Query: 758  VAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIR 579
            +AAGS C+Q++WMKQML +Y +  D++T+Y DNLS+I IS+NPVQHSRTKHIDIRHH+IR
Sbjct: 1197 IAAGSSCSQMVWMKQMLREYNVEQDVITLYYDNLSSISISKNPVQHSRTKHIDIRHHYIR 1256

Query: 578  DLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLCV 450
            DLVE  ++ ++H++TE Q+ADILTK+LD   F  LR  LG+C+
Sbjct: 1257 DLVEDKVVTLEHIATEEQLADILTKALDANMFEELRGKLGICL 1299


>gb|PRQ42351.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1762

 Score =  887 bits (2293), Expect = 0.0
 Identities = 446/768 (58%), Positives = 559/768 (72%), Gaps = 7/768 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNR L +M RVML S  ++   WAEA++TAC+ +NR +LRPG+  T YE+  
Sbjct: 1019 QQNGVVERKNRVLLDMGRVMLHSAGLTPNLWAEAISTACYTANRAFLRPGTNKTPYELWK 1078

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            GKKP++ +  VFG  CYI  DRE LGKFD +SDKG+FLGYS +S AYR+YN RT ++ E+
Sbjct: 1079 GKKPHVSHLRVFGSPCYIYRDREYLGKFDARSDKGIFLGYSLDSRAYRVYNKRTMSVMES 1138

Query: 2378 VNAVFDDL---SILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDT 2208
             N   DD    ++  N  ED+     ++  + ++      D              P+ D 
Sbjct: 1139 YNVSIDDCVVSTVQVNPDEDQPSGSQVNVELNEETDDSSND--------------PIFDP 1184

Query: 2207 XXXXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYR-DMV 2031
                              PVQR   +++QKDH T  VIG +   I+TRR+       D  
Sbjct: 1185 P-----------------PVQRTGFKQVQKDHSTQDVIGNLHGRIQTRRQAASQVSIDSA 1227

Query: 2030 RPSFFSSTCL---MVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPR 1860
               F +   +   ++S   FVS IEPKNV EAL D+ WINAMH+ELNQF RNDVW LVPR
Sbjct: 1228 LVCFLTENEVNINIISNCGFVSLIEPKNVKEALNDDEWINAMHDELNQFARNDVWYLVPR 1287

Query: 1859 PDNVNVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLL 1680
                NVIGTKWIF+NKSDEHGN+ RNKARLVAQGY QVEG+D+DETFAPVARLES+RLLL
Sbjct: 1288 LSEFNVIGTKWIFRNKSDEHGNVTRNKARLVAQGYKQVEGLDFDETFAPVARLESVRLLL 1347

Query: 1679 CVACSLDLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPR 1500
             +AC L   LYQMDVKSAFLNG L EEVYVEQP+GF+DP  P+ V+KL++ALYGLKQAPR
Sbjct: 1348 AIACHLHFTLYQMDVKSAFLNGVLQEEVYVEQPQGFKDPSNPDHVYKLRRALYGLKQAPR 1407

Query: 1499 AWYERLADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSM 1320
            AWYERL+  LV  G+ RG +DKTLFIK+D  H+ IAQVYVDDI+FGST DS   +F N M
Sbjct: 1408 AWYERLSTHLVSKGYIRGSIDKTLFIKRDNKHVMIAQVYVDDIIFGSTSDSYVKEFTNIM 1467

Query: 1319 SSTFEMSLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKL 1140
             S FEMS+ GELN+FLGLQ+RQL  G+F+ Q KYA+NLVKKFGL+ +K +  PM+TS KL
Sbjct: 1468 ESEFEMSMCGELNYFLGLQVRQLKTGMFLCQTKYAENLVKKFGLEYAKAVTNPMSTSVKL 1527

Query: 1139 CRDEVSEGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYV 960
              D   + VD TLYRSMIGSLLYLTASRPD+ +SV VCAR+Q++PK +HL AVKRII+YV
Sbjct: 1528 TEDLTGKSVDQTLYRSMIGSLLYLTASRPDISYSVGVCARFQANPKESHLEAVKRIIRYV 1587

Query: 959  SGSADLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSL 780
            SG+A  G+++T D+N  + G+SD+DW G+L+DRKSTSGGCF++GNN+V+W+S+KQ+C+SL
Sbjct: 1588 SGTATCGVYFTFDSNIEIAGYSDADWGGNLKDRKSTSGGCFFIGNNMVAWHSKKQNCISL 1647

Query: 779  STAESEYVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHID 600
            STAE+EYVAAGSCC Q++WMKQML DYG S   LT+ CDN SAI+IS+NPVQHSRTKHID
Sbjct: 1648 STAEAEYVAAGSCCTQMLWMKQMLRDYGFSQGKLTILCDNSSAINISKNPVQHSRTKHID 1707

Query: 599  IRHHFIRDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGL 456
            +R+HFIRDLVE+ L+ +  V TE+Q+AD+ TK LD  RF SLR ++G+
Sbjct: 1708 MRYHFIRDLVERNLLELAFVPTEHQLADLFTKPLDTARFESLRSAIGV 1755


>gb|PNY16758.1| gag-pol polyprotein [Trifolium pratense]
          Length = 704

 Score =  840 bits (2170), Expect = 0.0
 Identities = 422/742 (56%), Positives = 534/742 (71%)
 Frame = -1

Query: 2681 MLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILNGKKPNLKYFHVFGCVCYIL 2502
            ML +KN+  +FWAEA+N AC+I NRV LR G+  T YE+   KKP +KYFHVFG  CYIL
Sbjct: 1    MLHAKNLPYKFWAEAMNIACYIHNRVTLRTGTATTLYELWKKKKPTVKYFHVFGSKCYIL 60

Query: 2501 NDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQETVNAVFDDLSILGNKSEDEN 2322
             DRE   K DPKSD+G+F+GYS NS AYR++N RTRT+ E++N V DD       S+  +
Sbjct: 61   ADREPRRKLDPKSDEGIFIGYSTNSRAYRVFNSRTRTMMESINVVIDD-------SDLTS 113

Query: 2321 IADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXXXXXXXXXXELDQNLVPVQR 2142
            +   +++ ++                  TP PTP  D               +N+ P ++
Sbjct: 114  VDPAVETDVV------------------TPVPTPN-DDQAESNSVQDSEFNTENMRPSKK 154

Query: 2141 DPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSFFSSTCLMVSAACFVSNIEP 1962
             P  + QK+HP   VIG  S  I TRR                     +S +CF+S IEP
Sbjct: 155  -PSTRTQKNHPLDLVIGNPSQGITTRRSNDA-----------------ISNSCFISKIEP 196

Query: 1961 KNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVIGTKWIFKNKSDEHGNIVRN 1782
            KNV EAL DEFWINAM EEL QF R++VWDLVP PD +NVIGTK ++K K+DE+G+I RN
Sbjct: 197  KNVKEALTDEFWINAMQEELTQFKRSEVWDLVPGPDGINVIGTKCVYKKKTDENGDITRN 256

Query: 1781 KARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLDLKLYQMDVKSAFLNGFLNE 1602
            KARLVAQGY+Q+EGVD+DETFA VARLESIRLLL VAC L  KLYQMDVKSAFLN +LNE
Sbjct: 257  KARLVAQGYSQIEGVDFDETFALVARLESIRLLLVVACILKFKLYQMDVKSAFLNRYLNE 316

Query: 1601 EVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLADFLVQFGFKRGGVDKTLFI 1422
            EVYVEQPKGF DP  PN V KLKKALYGLKQAPRAWYERL +FLV  G+K+GG DKTLF+
Sbjct: 317  EVYVEQPKGFVDPSFPNHVDKLKKALYGLKQAPRAWYERLTEFLVNHGYKKGGNDKTLFV 376

Query: 1421 KKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMSLVGELNFFLGLQIRQLPDG 1242
            ++++  + IAQ+YVDDIVFG     + + FV  M S FEMSLVGEL +FLGLQ++Q+ D 
Sbjct: 377  REEKGKLMIAQIYVDDIVFGGMSRQMVEHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDT 436

Query: 1241 IFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSEGVDNTLYRSMIGSLLYLTA 1062
            IFVSQ KY +N+VKKFG+++  H RTP  T  KL +DE    VD +LYRSMIGSLLYLT 
Sbjct: 437  IFVSQEKYVRNIVKKFGMESGSHKRTPAPTHLKLTKDEKGIDVDQSLYRSMIGSLLYLTT 496

Query: 1061 SRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLGLWYTKDTNTNLVGFSDSDW 882
            SRPD+MF+V VCARYQ++PK++HL  VKRI KYV+G+   G+ Y+   N+ LVG+ D+DW
Sbjct: 497  SRPDIMFAVGVCARYQANPKMSHLTQVKRIFKYVNGTCGYGILYSHSENSTLVGYCDADW 556

Query: 881  AGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEYVAAGSCCAQLIWMKQMLDD 702
            AG  +DRKSTS  CF+LGNNL+SW+S+KQ+ VSLSTAE+EY+AAGS C+QL+WM+QML +
Sbjct: 557  AGSADDRKSTSRACFFLGNNLISWFSKKQNSVSLSTAEAEYIAAGSSCSQLLWMRQMLKE 616

Query: 701  YGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIRDLVEKGLIHIDHVSTENQI 522
              +  D++T+Y DNLSAI+IS+NP+QHSRTKHIDIR HFIRDL E+ ++ ++H+++E Q+
Sbjct: 617  NSVEQDVMTLYSDNLSAINISKNPIQHSRTKHIDIRRHFIRDLGEERIVTLEHIASEEQL 676

Query: 521  ADILTKSLDFERFSSLRKSLGL 456
            ADI TK+LD  +F  LR  LG+
Sbjct: 677  ADIFTKALDANQFERLRGKLGI 698


>dbj|GAU42103.1| hypothetical protein TSUD_134870 [Trifolium subterraneum]
          Length = 1408

 Score =  844 bits (2180), Expect = 0.0
 Identities = 422/747 (56%), Positives = 528/747 (70%)
 Frame = -1

Query: 2684 VMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILNGKKPNLKYFHVFGCVCYI 2505
            VML +K +   FWAEA+NTAC+I NRV LR G+  T YE+   KKP +KYFHVFG  CYI
Sbjct: 702  VMLHAKKLPYFFWAEAMNTACYIHNRVTLRTGTNTTLYELWKNKKPTVKYFHVFGSKCYI 761

Query: 2504 LNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQETVNAVFDDLSILGNKSEDE 2325
            L DR+   K DPKSD+G+FLGYS NS AYR++N RT+ + E+ N V  D    G +   E
Sbjct: 762  LADRKQRRKLDPKSDEGIFLGYSTNSRAYRVFNSRTKVMMESRNVVIVDHVERGTQDAGE 821

Query: 2324 NIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXXXXXXXXXXXELDQNLVPVQ 2145
            + A                          +   T V +            + +    P +
Sbjct: 822  DAA-------------------------ASDSSTEVFENVKEDENNMEASKTESMSAPPK 856

Query: 2144 RDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPSFFSSTCLMVSAACFVSNIE 1965
            + P  +IQK+HP+  +IG     I TRR   +                 +S ACFVS IE
Sbjct: 857  KGPSIRIQKNHPSDLIIGNPDQGISTRRMNDV-----------------ISNACFVSKIE 899

Query: 1964 PKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNVIGTKWIFKNKSDEHGNIVR 1785
             KNV EAL D+ WINAM EEL QF RN+VW+LVPRP NVN+IGTKW+F NKSDE+G + R
Sbjct: 900  QKNVKEALTDDCWINAMQEELEQFKRNEVWELVPRPKNVNMIGTKWVFMNKSDENGVVTR 959

Query: 1784 NKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSLDLKLYQMDVKSAFLNGFLN 1605
            NKARLVAQGY Q+EG+D+DETFA VARLESIRLLL VAC L  KL+QMDVKSAFLNG+LN
Sbjct: 960  NKARLVAQGYAQIEGIDFDETFAHVARLESIRLLLGVACILKFKLFQMDVKSAFLNGYLN 1019

Query: 1604 EEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLADFLVQFGFKRGGVDKTLF 1425
            EEV+VEQPKGF +P  PN V+KLKKALYGLKQAPRAWYERL +FL+  G+++ G DKTLF
Sbjct: 1020 EEVFVEQPKGFIEPTLPNHVYKLKKALYGLKQAPRAWYERLTEFLLSQGYRKRGNDKTLF 1079

Query: 1424 IKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMSLVGELNFFLGLQIRQLPD 1245
            +KK++    IAQ+YVDDIVFG     +   FV  M S FEMSLVGEL +FLGLQ++Q+ +
Sbjct: 1080 VKKEKGDFIIAQIYVDDIVFGGMSSKMVQHFVQQMQSEFEMSLVGELTYFLGLQVKQMEN 1139

Query: 1244 GIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSEGVDNTLYRSMIGSLLYLT 1065
             IFVSQ KYAKN+VKKFG+D   H RTP  T  KL +DE    VD +LYRSMIGSLLYLT
Sbjct: 1140 TIFVSQSKYAKNIVKKFGMDGGNHKRTPAATHLKLTKDETGIDVDQSLYRSMIGSLLYLT 1199

Query: 1064 ASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLGLWYTKDTNTNLVGFSDSD 885
            ASRPD+ F+V VCARYQ+ PK++HL  VKRI+K V+G+ D G+ Y    N+ LVG+ D+D
Sbjct: 1200 ASRPDITFAVGVCARYQAQPKMSHLVQVKRILKSVNGTCDYGILYCHSENSTLVGYCDAD 1259

Query: 884  WAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEYVAAGSCCAQLIWMKQMLD 705
            WAG  +DRKSTS  CF+LGNNL+SW+S+KQ+ VSLSTAE+EY+AAGS C+QL+WMKQML 
Sbjct: 1260 WAGSADDRKSTSCACFFLGNNLISWFSKKQNSVSLSTAEAEYIAAGSSCSQLLWMKQMLK 1319

Query: 704  DYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIRDLVEKGLIHIDHVSTENQ 525
            +Y +  D++T+YCDNLSAI+IS+NP+QHSRTKHIDIRHHFIRDLVE  ++ ++H+ TE+Q
Sbjct: 1320 EYNVEQDVMTLYCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVEDKIVTLEHIGTEDQ 1379

Query: 524  IADILTKSLDFERFSSLRKSLGLCVLK 444
            +ADI +K+LD  +F  LR  LG+ +L+
Sbjct: 1380 LADIFSKALDAVQFEKLRGKLGIFLLE 1406


>dbj|GAU43338.1| hypothetical protein TSUD_398830 [Trifolium subterraneum]
          Length = 2065

 Score =  838 bits (2165), Expect = 0.0
 Identities = 426/754 (56%), Positives = 520/754 (68%), Gaps = 27/754 (3%)
 Frame = -1

Query: 2645 AEALNTACHISNRVYLRPGSTMTSYEILNGKKPNLKYFHVFGCVCYILNDRENLGKFDPK 2466
            AEA+NTAC+I NRV LR G+  T YE+   KKP +KYFHVFG  CYIL DRE   K DPK
Sbjct: 843  AEAMNTACYIHNRVTLRTGTNTTLYELWKNKKPTVKYFHVFGSKCYILADREQRRKLDPK 902

Query: 2465 SDKGMFLGYSKNSHAYRIYNLRTRTIQETVNAVFDDLSILGNKSEDENIADVIDSIILQK 2286
            SD+G+FLGYS NS AYR++N RT+ + E  N V  D    G +   E+   V      + 
Sbjct: 903  SDEGIFLGYSTNSRAYRVFNSRTKVMMELSNVVIVDHVERGMQDAGEDA--VASDSSTES 960

Query: 2285 PASVVCDSQGVTGGETTPQPTPVLDTXXXXXXXXXXXELDQNLVPVQRDPPRKIQKDHPT 2106
              +V  D   +   ET+                          VP ++ P  +IQK+HP+
Sbjct: 961  FENVKEDENNMEASETSSMS-----------------------VPPKKGPSIRIQKNHPS 997

Query: 2105 TQVIGEVSDNIRTRRKERLNYRDMVRPSFFSSTCLMVSAACFVSNIEPKNVNEALKDEFW 1926
              +IG     + TRR                    ++S ACFVS IEPKNV EAL D+ W
Sbjct: 998  DLIIGNPDQGVSTRRMND-----------------VISNACFVSKIEPKNVKEALTDDCW 1040

Query: 1925 INAMHEELNQFIRNDVWDLVPRPDNVNVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQV 1746
            INAM EEL QF RN+VW+LVPRP+NVNVIGTKW+FKNKSDE+G + RNKARLVAQGY Q+
Sbjct: 1041 INAMQEELEQFKRNEVWELVPRPENVNVIGTKWVFKNKSDENGVVTRNKARLVAQGYAQI 1100

Query: 1745 EGVDYDETFAPVARLESIRLLL---------------------------CVACSLDLKLY 1647
            EG+D+DETFAPVARLESIRLLL                            VAC L  KL+
Sbjct: 1101 EGIDFDETFAPVARLESIRLLLGVACILKFKLFQMDVKSAFLNGYLNEEVVACILKFKLF 1160

Query: 1646 QMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERLADFLV 1467
            QMDVKSAFLNG+LNEEV+VEQPKGF +P  PN V+KLKKALYGLKQAPRAWYERL +FL+
Sbjct: 1161 QMDVKSAFLNGYLNEEVFVEQPKGFIEPTLPNHVYKLKKALYGLKQAPRAWYERLTEFLL 1220

Query: 1466 QFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEMSLVGE 1287
              G+++GG DKTLF+KK+     IAQ+YVDDIVFG     +   FV  M S FEMSLVGE
Sbjct: 1221 SQGYRKGGNDKTLFVKKEEGDFIIAQIYVDDIVFGGMSSKMVQHFVQQMQSEFEMSLVGE 1280

Query: 1286 LNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVSEGVDN 1107
            L +FLGLQ++Q+ D IFVSQ KYAKN+VKKFG+D   H RTP  T  KL +DE    VD 
Sbjct: 1281 LTYFLGLQVKQMEDTIFVSQSKYAKNIVKKFGMDGGNHKRTPATTHLKLTKDETGIDVDQ 1340

Query: 1106 TLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADLGLWYT 927
            +LYRSMIGSLLYLTASRPD+ F+V VCARYQ+ PK++HL  VKRI+KYV+G+ D G+ Y 
Sbjct: 1341 SLYRSMIGSLLYLTASRPDITFAVGVCARYQAQPKMSHLVQVKRILKYVNGTCDYGILYC 1400

Query: 926  KDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESEYVAAG 747
               N+ LVG+ D DWAG  +DRKSTSG CF LGNNL+SW+S+KQ+ VSLSTAE+EY+AAG
Sbjct: 1401 HSENSTLVGYCDVDWAGSADDRKSTSGACFILGNNLISWFSKKQNSVSLSTAEAEYIAAG 1460

Query: 746  SCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFIRDLVE 567
            S C+QL+WMKQML +Y +  D++T+YCDNLSAI+IS+NP+QHSRTKHIDIRHHFIRDLVE
Sbjct: 1461 SSCSQLLWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVE 1520

Query: 566  KGLIHIDHVSTENQIADILTKSLDFERFSSLRKS 465
              ++ ++H+ TE Q+ADI TK+LD  +F  L KS
Sbjct: 1521 DKIVTLEHIGTEEQLADIFTKALDAVQFEKLNKS 1554


>ref|XP_012849593.1| PREDICTED: uncharacterized protein LOC105969384 [Erythranthe guttata]
          Length = 1991

 Score =  834 bits (2155), Expect = 0.0
 Identities = 413/674 (61%), Positives = 502/674 (74%), Gaps = 9/674 (1%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNRTLQEMARVM+ +K I+ RFWAEA+NTACHI NRVYLRPG+T T YEI  
Sbjct: 778  QQNGVVERKNRTLQEMARVMMNAKEIAPRFWAEAVNTACHIVNRVYLRPGTTKTPYEIWK 837

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
            GKKP L Y   FGC CYILNDRE LGKFD +SD+G+FLGYS+NSHAYRI+NLRT+++ E+
Sbjct: 838  GKKPQLNYLRTFGCTCYILNDREQLGKFDARSDQGIFLGYSQNSHAYRIFNLRTKSVMES 897

Query: 2378 VNAVFDDLSILGNKSEDE---------NIADVIDSIILQKPASVVCDSQGVTGGETTPQP 2226
                FDD +      E+E         ++   + ++ +    S   D+   T  E    P
Sbjct: 898  AYVQFDDFNNNAGPLEEEPTKESDNSSSVTPTVPTVDVASTISEESDANSETEDEAEVSP 957

Query: 2225 TPVLDTXXXXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLN 2046
              + D                      ++P ++ +K+HP  QVIG V + I+TR K ++N
Sbjct: 958  LELDDQ-------------------THKEPSKRDKKNHPVDQVIGPVEEGIQTRGKPKVN 998

Query: 2045 YRDMVRPSFFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLV 1866
            Y++M R              CF S IEPKNVNEAL DE+WI AMHEEL QF+RNDVW LV
Sbjct: 999  YKEMAR------------YVCFTSTIEPKNVNEALLDEYWIRAMHEELEQFVRNDVWVLV 1046

Query: 1865 PRPDNVNVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRL 1686
            PRPDNVN+IGTKW+FKNKSD HGNIVRNKARLVAQGY+Q+E +D+DETFAPVARLES+RL
Sbjct: 1047 PRPDNVNIIGTKWVFKNKSDVHGNIVRNKARLVAQGYSQIEDIDFDETFAPVARLESVRL 1106

Query: 1685 LLCVACSLDLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQA 1506
            LL +AC L +KL+QMDVKSAFL G L EEVYVEQPKGFQDPH P  VFKL KALYGLKQA
Sbjct: 1107 LLAIACFLKIKLFQMDVKSAFLIGILKEEVYVEQPKGFQDPHHPKHVFKLNKALYGLKQA 1166

Query: 1505 PRAWYERLADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVN 1326
            PRAWYERL +FL+  G+ RG VD+TLF KK +  + IAQ+YVDDIVFGST  +  ++FV 
Sbjct: 1167 PRAWYERLTEFLLHKGYTRGSVDRTLFFKKSKGDILIAQIYVDDIVFGSTSQTKIEEFVK 1226

Query: 1325 SMSSTFEMSLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQ 1146
             MSS FEMS+VGEL  +LGLQ++Q+ DGIF++Q KYAKNLVK+FGL+++K +RTPM T+ 
Sbjct: 1227 QMSSEFEMSMVGELT-YLGLQVKQMSDGIFITQSKYAKNLVKRFGLESAKTVRTPMGTND 1285

Query: 1145 KLCRDEVSEGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIK 966
            KL R   +  VD TLYRSMIGSLLYLT+SRPD+ +SV VCARYQS+PK  HL+AVKRII+
Sbjct: 1286 KLSRQLDATAVDPTLYRSMIGSLLYLTSSRPDICYSVGVCARYQSNPKECHLSAVKRIIR 1345

Query: 965  YVSGSADLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCV 786
            YVS + D G+WY+ DTNT L GFSD+DWAGD  DRKST+GGCFYLGNNLVSWYS+KQ+ +
Sbjct: 1346 YVSRTTDFGIWYSMDTNTTLAGFSDADWAGDANDRKSTTGGCFYLGNNLVSWYSKKQNSI 1405

Query: 785  SLSTAESEYVAAGS 744
            SLSTAES+Y+ A +
Sbjct: 1406 SLSTAESKYIVAAN 1419


>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  803 bits (2075), Expect = 0.0
 Identities = 402/764 (52%), Positives = 535/764 (70%), Gaps = 3/764 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNR+L+E+AR ML   N+ K FWA+A+NTACH+ N+V +RP    T YEI  
Sbjct: 806  QQNGVVERKNRSLEELARTMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYK 865

Query: 2558 GKKPNLKYFHVFGCVCYILND-RENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQE 2382
            GKKPN+ YF VFGC CY+LN+ +E LGKFD K+D+ +FLGYS NS AYRIYN RT  ++E
Sbjct: 866  GKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEE 925

Query: 2381 TVNAVFDDLSILGNK-SEDENIADVIDSIILQ-KPASVVCDSQGVTGGETTPQPTPVLDT 2208
            +V+ VFD+ +    + +E E++ +++D  +L+ +P  V  +S+     + T +  P    
Sbjct: 926  SVHVVFDESNKQETRQTEVEDLTELLDQSLLENEPNDVSKESESHVKQKETCEQLP---- 981

Query: 2207 XXXXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVR 2028
                                      K  +D     +IG +   + TR            
Sbjct: 982  -----------------------KEWKTTRDLSMDNIIGSIGKGVSTR------------ 1006

Query: 2027 PSFFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNV 1848
             S   + C   +   FVS +EPKN++EALKDE W+ AM EELNQF RN+VWDLVP P + 
Sbjct: 1007 -SAIKNIC---NTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDY 1062

Query: 1847 NVIGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVAC 1668
             +IGTKW+F+NK DE G I+RNKARLVA+GY Q EG+DYDETFAPVAR+E+IRLLL  + 
Sbjct: 1063 PIIGTKWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYST 1122

Query: 1667 SLDLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYE 1488
              + KLYQMDVKSAFLNG + EEVYVEQP GF D   PN V+KLKKALYGLKQAPR+WY+
Sbjct: 1123 IRNFKLYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYD 1182

Query: 1487 RLADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTF 1308
            RL+ FL++  ++RG VD TLF+KK ++     Q+YVDDIVFGST  SL  +F  +M   F
Sbjct: 1183 RLSKFLIENDYERGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNISLCKEFAKTMQGEF 1242

Query: 1307 EMSLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDE 1128
            EMS++GEL FFLGLQ++Q+ DG F+SQ KY   L+KKFG++  K   TP++ +  L  DE
Sbjct: 1243 EMSMMGELTFFLGLQVKQMHDGTFISQSKYCNELLKKFGMEGCKEAATPISNNCNLDLDE 1302

Query: 1127 VSEGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSA 948
                VDN+ YR +IGSLLYLTASRPD+MF+VC+CAR+Q++PK +H+ +VKRI+KY+ G+ 
Sbjct: 1303 KGIAVDNSKYRGIIGSLLYLTASRPDIMFAVCLCARFQANPKESHMKSVKRILKYLKGTT 1362

Query: 947  DLGLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAE 768
            ++GLWY K  + +L+G+SDSD+AG   DRKSTSG C  LG+ LVSW+S+KQ+CV+LSTAE
Sbjct: 1363 NVGLWYPKGVSLSLIGYSDSDYAGCRLDRKSTSGTCHLLGSALVSWHSKKQACVALSTAE 1422

Query: 767  SEYVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHH 588
            +EY+AAGSCCAQ++WMKQ L DYG+  + + + CDN SAI++++NP+ HSRTKHI+IRHH
Sbjct: 1423 AEYIAAGSCCAQILWMKQQLRDYGVELNKIPLRCDNTSAINLTKNPILHSRTKHIEIRHH 1482

Query: 587  FIRDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGL 456
            F+RD V++    ++ V T  Q+ADI TK L  ERF+ LR  LG+
Sbjct: 1483 FLRDHVQRNDCAVEFVETSKQLADIFTKPLPRERFNQLRIELGI 1526


>gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
 gb|KYP38474.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1482

 Score =  786 bits (2031), Expect = 0.0
 Identities = 400/762 (52%), Positives = 528/762 (69%), Gaps = 1/762 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNR+L E+AR ML    + K FWA+A+NTAC++ NR+ +RP    T YE+  
Sbjct: 762  QQNGVVERKNRSLIELARAMLNENGLPKYFWADAVNTACYVLNRILIRPILKKTPYELYK 821

Query: 2558 GKKPNLKYFHVFGCVCYILND-RENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQE 2382
            G+KP++ +F VFGC C++LN+ ++ LGKFD K+D+G+F+GYS  S AYR++N  T +++E
Sbjct: 822  GRKPDISHFKVFGCKCFVLNNGKDTLGKFDAKADEGVFIGYSAISKAYRVFNKSTLSVEE 881

Query: 2381 TVNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXX 2202
            +++  FD+ +IL  K +  N  D I   I Q+   +              Q TP  DT  
Sbjct: 882  SIHVTFDETNIL-EKGKSLNDEDEIGDSITQEEEKLELQ-----------QKTPSEDTS- 928

Query: 2201 XXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPS 2022
                           +P +   P+ +  D+    ++G+++  + TR    L   DM    
Sbjct: 929  ---------------LPKEWRKPKDLSLDN----ILGDINKGVSTRHSFNLLSDDMA--- 966

Query: 2021 FFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNV 1842
                         FVS IEP  V  ALKDEFWI AMH+ELNQF RNDVW LVP   N+N+
Sbjct: 967  -------------FVSQIEPLCVEHALKDEFWIMAMHDELNQFKRNDVWILVPFNKNMNI 1013

Query: 1841 IGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSL 1662
            IGTKW+F+NK +E G IV+NKARLVA+GY Q EG+D+ ET+APVARLE++RLLL  AC  
Sbjct: 1014 IGTKWVFRNKLNEEGVIVKNKARLVAKGYNQQEGIDFGETYAPVARLEAVRLLLAFACVF 1073

Query: 1661 DLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERL 1482
            D KLYQMDVKSAFLNG ++EEVYV QP GF D   P  V+KLKKALYGLKQAPR WYERL
Sbjct: 1074 DFKLYQMDVKSAFLNGLIDEEVYVAQPPGFVDCKLPKHVYKLKKALYGLKQAPRKWYERL 1133

Query: 1481 ADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEM 1302
            + FL+   F+RG VDKTLFIK+    + + Q+YVDDI+FGST  SL  +FV++M   F+M
Sbjct: 1134 SKFLLTHDFQRGNVDKTLFIKRKSKDILLIQIYVDDIIFGSTNQSLCGEFVSNMQKEFDM 1193

Query: 1301 SLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVS 1122
            S++GEL+FFLGLQ++Q+ +GIF+ Q KY+K L+KKF ++N K   TPM+T+  L  D   
Sbjct: 1194 SMMGELSFFLGLQVKQMENGIFLHQTKYSKELLKKFDMENCKISNTPMSTNCYLDSDIAG 1253

Query: 1121 EGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADL 942
            + V+ ++YR +IGSLLYLTASRPD+M+SVCVCAR+QS PK +HL AVK+I+KY+ G+ ++
Sbjct: 1254 KDVEESMYRGIIGSLLYLTASRPDIMYSVCVCARFQSKPKESHLKAVKKILKYLKGTINV 1313

Query: 941  GLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESE 762
            GLWY K T+ +L G+SDSD+AG   DRKSTSG C   G  L+SW S+KQ+CV+LSTAE+E
Sbjct: 1314 GLWYPKGTSPSLTGYSDSDFAGCKLDRKSTSGTCHTFGECLISWQSKKQACVALSTAEAE 1373

Query: 761  YVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFI 582
            Y+AAGSCCAQ IW K  L D+G+  D + + CDN SAI+ISRNP+ HSRTKHI++RHHFI
Sbjct: 1374 YIAAGSCCAQSIWFKHQLQDFGLKIDHIPLKCDNTSAINISRNPILHSRTKHIEVRHHFI 1433

Query: 581  RDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGL 456
            RD VEKG   I  + +E+Q+ADI TK L  ERF  LR +LG+
Sbjct: 1434 RDHVEKGDCDIKFIMSEDQLADIFTKPLPKERFFKLRTNLGI 1475


>gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
 gb|KYP55193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1530

 Score =  786 bits (2031), Expect = 0.0
 Identities = 400/762 (52%), Positives = 528/762 (69%), Gaps = 1/762 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNR+L E+AR ML    + K FWA+A+NTAC++ NR+ +RP    T YE+  
Sbjct: 810  QQNGVVERKNRSLIELARAMLNENGLPKYFWADAVNTACYVLNRILIRPILKKTPYELYK 869

Query: 2558 GKKPNLKYFHVFGCVCYILND-RENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQE 2382
            G+KP++ +F VFGC C++LN+ ++ LGKFD K+D+G+F+GYS  S AYR++N  T +++E
Sbjct: 870  GRKPDISHFKVFGCKCFVLNNGKDTLGKFDAKADEGVFIGYSAISKAYRVFNKSTLSVEE 929

Query: 2381 TVNAVFDDLSILGNKSEDENIADVIDSIILQKPASVVCDSQGVTGGETTPQPTPVLDTXX 2202
            +++  FD+ +IL  K +  N  D I   I Q+   +              Q TP  DT  
Sbjct: 930  SIHVTFDETNIL-EKGKSLNDEDEIGDSITQEEEKLELQ-----------QKTPSEDTS- 976

Query: 2201 XXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPS 2022
                           +P +   P+ +  D+    ++G+++  + TR    L   DM    
Sbjct: 977  ---------------LPKEWRKPKDLSLDN----ILGDINKGVSTRHSFNLLSDDMA--- 1014

Query: 2021 FFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNV 1842
                         FVS IEP  V  ALKDEFWI AMH+ELNQF RNDVW LVP   N+N+
Sbjct: 1015 -------------FVSQIEPLCVEHALKDEFWIMAMHDELNQFKRNDVWILVPFNKNMNI 1061

Query: 1841 IGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSL 1662
            IGTKW+F+NK +E G IV+NKARLVA+GY Q EG+D+ ET+APVARLE++RLLL  AC  
Sbjct: 1062 IGTKWVFRNKLNEEGVIVKNKARLVAKGYNQQEGIDFGETYAPVARLEAVRLLLAFACVF 1121

Query: 1661 DLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERL 1482
            D KLYQMDVKSAFLNG ++EEVYV QP GF D   P  V+KLKKALYGLKQAPR WYERL
Sbjct: 1122 DFKLYQMDVKSAFLNGLIDEEVYVAQPPGFVDCKLPKHVYKLKKALYGLKQAPRKWYERL 1181

Query: 1481 ADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEM 1302
            + FL+   F+RG VDKTLFIK+    + + Q+YVDDI+FGST  SL  +FV++M   F+M
Sbjct: 1182 SKFLLTHDFQRGNVDKTLFIKRKSKDILLIQIYVDDIIFGSTNQSLCGEFVSNMQKEFDM 1241

Query: 1301 SLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVS 1122
            S++GEL+FFLGLQ++Q+ +GIF+ Q KY+K L+KKF ++N K   TPM+T+  L  D   
Sbjct: 1242 SMMGELSFFLGLQVKQMENGIFLHQTKYSKELLKKFDMENCKISNTPMSTNCYLDSDIAG 1301

Query: 1121 EGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADL 942
            + V+ ++YR +IGSLLYLTASRPD+M+SVCVCAR+QS PK +HL AVK+I+KY+ G+ ++
Sbjct: 1302 KDVEESMYRGIIGSLLYLTASRPDIMYSVCVCARFQSKPKESHLKAVKKILKYLKGTINV 1361

Query: 941  GLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESE 762
            GLWY K T+ +L G+SDSD+AG   DRKSTSG C   G  L+SW S+KQ+CV+LSTAE+E
Sbjct: 1362 GLWYPKGTSPSLTGYSDSDFAGCKLDRKSTSGTCHTFGECLISWQSKKQACVALSTAEAE 1421

Query: 761  YVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFI 582
            Y+AAGSCCAQ IW K  L D+G+  D + + CDN SAI+ISRNP+ HSRTKHI++RHHFI
Sbjct: 1422 YIAAGSCCAQSIWFKHQLQDFGLKIDHIPLKCDNTSAINISRNPILHSRTKHIEVRHHFI 1481

Query: 581  RDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGL 456
            RD VEKG   I  + +E+Q+ADI TK L  ERF  LR +LG+
Sbjct: 1482 RDHVEKGDCDIKFIMSEDQLADIFTKPLPKERFFKLRTNLGI 1523


>ref|XP_019173231.1| PREDICTED: uncharacterized protein LOC109168701 [Ipomoea nil]
          Length = 1480

 Score =  784 bits (2025), Expect = 0.0
 Identities = 407/763 (53%), Positives = 513/763 (67%), Gaps = 1/763 (0%)
 Frame = -1

Query: 2738 QQNGVAERKNRTLQEMARVMLCSKNISKRFWAEALNTACHISNRVYLRPGSTMTSYEILN 2559
            QQNGV ERKNRT+QEM RV+L +K + ++FWAEA+NTA HI NR                
Sbjct: 800  QQNGVVERKNRTIQEMGRVLLNAKGLPQKFWAEAVNTAYHIINR---------------- 843

Query: 2558 GKKPNLKYFHVFGCVCYILNDRENLGKFDPKSDKGMFLGYSKNSHAYRIYNLRTRTIQET 2379
                                DR  + KF+ KSD+G+FLGY+ NS AYR+YN  T+TI E+
Sbjct: 844  --------------------DRNRVAKFETKSDEGIFLGYATNSRAYRVYNKVTKTIMES 883

Query: 2378 VNAVFDDLSILGNKSEDENIADVIDSIILQKPASVV-CDSQGVTGGETTPQPTPVLDTXX 2202
             N V DD                 D I   +P  V   D+        +P P+P      
Sbjct: 884  TNVVIDD--------------QPSDIITTTQPGPVTEPDTSCPEPNPESPMPSPTSTQPD 929

Query: 2201 XXXXXXXXXELDQNLVPVQRDPPRKIQKDHPTTQVIGEVSDNIRTRRKERLNYRDMVRPS 2022
                     + D + +    D P +IQK HP   VIG+ S  ++TR K + +Y  +   S
Sbjct: 930  QETESESESDTDHSDI----DIPTRIQKAHPIQNVIGDPSSGVKTRGKPKRDYLQLAGYS 985

Query: 2021 FFSSTCLMVSAACFVSNIEPKNVNEALKDEFWINAMHEELNQFIRNDVWDLVPRPDNVNV 1842
                        C+ S IEPKNV EAL DE WI AM EEL Q+      DL         
Sbjct: 986  ------------CYTSQIEPKNVKEALTDEHWIKAMQEELGQY----QMDLC-------- 1021

Query: 1841 IGTKWIFKNKSDEHGNIVRNKARLVAQGYTQVEGVDYDETFAPVARLESIRLLLCVACSL 1662
                    NK+D  GNI RNKARLV QGY+Q+EG+DYDETFAPVARLESIRLLL +AC+L
Sbjct: 1022 --------NKTDAAGNIARNKARLVTQGYSQIEGIDYDETFAPVARLESIRLLLSIACAL 1073

Query: 1661 DLKLYQMDVKSAFLNGFLNEEVYVEQPKGFQDPHKPNFVFKLKKALYGLKQAPRAWYERL 1482
              KL+QMDVK+AFLNG+L+E++YV QPKGF+DPH P++V+KL+KALYGLKQAP+AWYERL
Sbjct: 1074 KFKLFQMDVKTAFLNGYLSEDIYVAQPKGFEDPHHPDYVYKLQKALYGLKQAPKAWYERL 1133

Query: 1481 ADFLVQFGFKRGGVDKTLFIKKDRHHMTIAQVYVDDIVFGSTCDSLRDDFVNSMSSTFEM 1302
              +L+Q  +KRGG DKTLFIK+   H+TIAQVYVDDIVFGST     D  V  M   FEM
Sbjct: 1134 TQYLLQNNYKRGGSDKTLFIKRSGKHITIAQVYVDDIVFGSTQPGETDQLVKVMQQEFEM 1193

Query: 1301 SLVGELNFFLGLQIRQLPDGIFVSQCKYAKNLVKKFGLDNSKHMRTPMNTSQKLCRDEVS 1122
            S++GEL +FLGLQ+ Q  +GIF+SQ KYAKNL+ KFGL+++K  RTP++T+ KL +DE  
Sbjct: 1194 SMIGELTYFLGLQVSQTKEGIFISQEKYAKNLLSKFGLESAKDARTPISTTTKLFKDEKG 1253

Query: 1121 EGVDNTLYRSMIGSLLYLTASRPDLMFSVCVCARYQSDPKITHLNAVKRIIKYVSGSADL 942
              VD T+YRSMIGSLLYLTASRPD+M SV +CARYQ+DPK +HL AVKRIIKYV G+ + 
Sbjct: 1254 TSVDPTMYRSMIGSLLYLTASRPDIMVSVGMCARYQADPKESHLKAVKRIIKYVKGTINY 1313

Query: 941  GLWYTKDTNTNLVGFSDSDWAGDLEDRKSTSGGCFYLGNNLVSWYSRKQSCVSLSTAESE 762
            G+WY+ DTN NL G+SD+DWAG+ +DRKSTSGGCF++G NLV+W S+KQ+ +SLSTAE+E
Sbjct: 1314 GIWYSSDTNLNLAGYSDADWAGNADDRKSTSGGCFFIGKNLVAWLSKKQNSISLSTAEAE 1373

Query: 761  YVAAGSCCAQLIWMKQMLDDYGISSDILTMYCDNLSAIDISRNPVQHSRTKHIDIRHHFI 582
            Y+AAGSCC QL+WM+QML DYGI    +T++CDN SAI+IS+NPVQHSRTKHIDIRHHFI
Sbjct: 1374 YIAAGSCCTQLLWMRQMLIDYGIEQQSMTLFCDNTSAINISKNPVQHSRTKHIDIRHHFI 1433

Query: 581  RDLVEKGLIHIDHVSTENQIADILTKSLDFERFSSLRKSLGLC 453
            R+LVE+  I +++ ST+  +AD+ TK LD  RF  LR +LG+C
Sbjct: 1434 RELVEEKEIIMEYTSTDKNLADLFTKPLDKSRFELLRAALGVC 1476