BLASTX nr result
ID: Rehmannia29_contig00019742
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00019742
(525 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011079840.1| DNA repair helicase XPD [Sesamum indicum] 114 5e-26
ref|XP_012832474.1| PREDICTED: DNA repair helicase UVH6 [Erythra... 112 2e-25
gb|PIN25845.1| RNA polymerase II transcription initiation [Handr... 109 1e-24
ref|XP_022856201.1| DNA repair helicase XPD isoform X1 [Olea eur... 109 2e-24
ref|XP_019197478.1| PREDICTED: DNA repair helicase XPD [Ipomoea ... 100 2e-21
gb|OIV98879.1| hypothetical protein TanjilG_21710 [Lupinus angus... 95 2e-21
ref|XP_019223398.1| PREDICTED: DNA repair helicase XPD [Nicotian... 100 5e-21
ref|XP_015077445.1| PREDICTED: DNA repair helicase UVH6 [Solanum... 100 5e-21
ref|XP_009787262.1| PREDICTED: DNA repair helicase UVH6 [Nicotia... 100 5e-21
ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6 isoform ... 100 5e-21
ref|XP_004240533.1| PREDICTED: DNA repair helicase XPD [Solanum ... 100 5e-21
ref|XP_018451349.1| PREDICTED: DNA repair helicase XPD [Raphanus... 99 6e-21
ref|XP_013698306.1| DNA repair helicase XPD-like [Brassica napus] 99 6e-21
ref|XP_013697459.1| DNA repair helicase XPD [Brassica napus] >gi... 99 6e-21
ref|XP_013604908.1| PREDICTED: DNA repair helicase UVH6 [Brassic... 99 6e-21
ref|XP_009111161.1| PREDICTED: DNA repair helicase XPD [Brassica... 99 6e-21
emb|CDY15454.1| BnaA08g27380D [Brassica napus] 99 7e-21
dbj|BAJ34374.1| unnamed protein product [Eutrema halophilum] 98 7e-21
gb|KVH94396.1| ATP-dependent helicase, C-terminal [Cynara cardun... 99 8e-21
ref|XP_019465157.1| PREDICTED: DNA repair helicase XPD-like [Lup... 95 1e-20
>ref|XP_011079840.1| DNA repair helicase XPD [Sesamum indicum]
Length = 757
Score = 114 bits (284), Expect = 5e-26
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGVGDMLF 177
SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDK GAMGKKTLLSQEDLEKM NG G+MLF
Sbjct: 699 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKTGAMGKKTLLSQEDLEKMANGAGEMLF 757
>ref|XP_012832474.1| PREDICTED: DNA repair helicase UVH6 [Erythranthe guttata]
gb|EYU46592.1| hypothetical protein MIMGU_mgv1a001802mg [Erythranthe guttata]
Length = 757
Score = 112 bits (280), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGVGDMLF 177
SHLRDAHLNLSTDMA+HIA+EFLRRMAQPYDK GA+GKKTLLSQEDLEKMVNG GDM+F
Sbjct: 699 SHLRDAHLNLSTDMALHIAKEFLRRMAQPYDKTGAVGKKTLLSQEDLEKMVNGAGDMMF 757
>gb|PIN25845.1| RNA polymerase II transcription initiation [Handroanthus
impetiginosus]
Length = 757
Score = 109 bits (273), Expect = 1e-24
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGVGDMLF 177
SHLRDAHLNLSTDMAVHIAREFLRRMAQPYD GAMGK+TLLS+EDLEKMVNGV +MLF
Sbjct: 699 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDNTGAMGKRTLLSEEDLEKMVNGVTEMLF 757
>ref|XP_022856201.1| DNA repair helicase XPD isoform X1 [Olea europaea var. sylvestris]
Length = 757
Score = 109 bits (272), Expect = 2e-24
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGVGDMLF 177
SHLRDAHLNLSTDMAVHIAREFLR+MAQPYDK GAMGKKTLLSQEDL+K NG+G+MLF
Sbjct: 699 SHLRDAHLNLSTDMAVHIAREFLRKMAQPYDKTGAMGKKTLLSQEDLQKTGNGIGEMLF 757
>ref|XP_019197478.1| PREDICTED: DNA repair helicase XPD [Ipomoea nil]
ref|XP_019197479.1| PREDICTED: DNA repair helicase XPD [Ipomoea nil]
Length = 758
Score = 100 bits (250), Expect = 2e-21
Identities = 49/59 (83%), Positives = 56/59 (94%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDM++HIA+EFLR+MAQPYDK+GA+GKKTLLSQEDLEKMV G G+ML
Sbjct: 699 SHLRDAHLNLSTDMSIHIAKEFLRKMAQPYDKSGALGKKTLLSQEDLEKMVTGPDGEML 757
>gb|OIV98879.1| hypothetical protein TanjilG_21710 [Lupinus angustifolius]
Length = 168
Score = 95.1 bits (235), Expect = 2e-21
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNG 159
SHL DAHLNLSTDMA+HIAREFLR+MAQPYDK G G+KTLLSQEDLEKMV G
Sbjct: 110 SHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGSGRKTLLSQEDLEKMVEG 162
>ref|XP_019223398.1| PREDICTED: DNA repair helicase XPD [Nicotiana attenuata]
ref|XP_019223399.1| PREDICTED: DNA repair helicase XPD [Nicotiana attenuata]
gb|OIT34082.1| dna repair helicase xpd [Nicotiana attenuata]
Length = 758
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDMAV+IA+EFLR+MAQPYDKNGA+GKKTLLSQEDLE M+ G G+ML
Sbjct: 699 SHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEML 757
>ref|XP_015077445.1| PREDICTED: DNA repair helicase UVH6 [Solanum pennellii]
Length = 758
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDMAV+IA+EFLR+MAQPYDKNGA+GKKTLLSQEDLE M+ G G+ML
Sbjct: 699 SHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEML 757
>ref|XP_009787262.1| PREDICTED: DNA repair helicase UVH6 [Nicotiana sylvestris]
ref|XP_009787263.1| PREDICTED: DNA repair helicase UVH6 [Nicotiana sylvestris]
ref|XP_009787264.1| PREDICTED: DNA repair helicase UVH6 [Nicotiana sylvestris]
Length = 758
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDMAV+IA+EFLR+MAQPYDKNGA+GKKTLLSQEDLE M+ G G+ML
Sbjct: 699 SHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEML 757
>ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6 isoform X1 [Solanum tuberosum]
ref|XP_015168017.1| PREDICTED: DNA repair helicase UVH6 isoform X1 [Solanum tuberosum]
Length = 758
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDMAV+IA+EFLR+MAQPYDKNGA+GKKTLLSQEDLE M+ G G+ML
Sbjct: 699 SHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEML 757
>ref|XP_004240533.1| PREDICTED: DNA repair helicase XPD [Solanum lycopersicum]
Length = 758
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGV-GDML 174
SHLRDAHLNLSTDMAV+IA+EFLR+MAQPYDKNGA+GKKTLLSQEDLE M+ G G+ML
Sbjct: 699 SHLRDAHLNLSTDMAVYIAKEFLRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEML 757
>ref|XP_018451349.1| PREDICTED: DNA repair helicase XPD [Raphanus sativus]
Length = 758
Score = 99.4 bits (246), Expect = 6e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 699 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 758
>ref|XP_013698306.1| DNA repair helicase XPD-like [Brassica napus]
Length = 758
Score = 99.4 bits (246), Expect = 6e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 699 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 758
>ref|XP_013697459.1| DNA repair helicase XPD [Brassica napus]
ref|XP_013697460.1| DNA repair helicase XPD [Brassica napus]
Length = 758
Score = 99.4 bits (246), Expect = 6e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 699 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 758
>ref|XP_013604908.1| PREDICTED: DNA repair helicase UVH6 [Brassica oleracea var.
oleracea]
ref|XP_013604909.1| PREDICTED: DNA repair helicase UVH6 [Brassica oleracea var.
oleracea]
Length = 758
Score = 99.4 bits (246), Expect = 6e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 699 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 758
>ref|XP_009111161.1| PREDICTED: DNA repair helicase XPD [Brassica rapa]
Length = 758
Score = 99.4 bits (246), Expect = 6e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 699 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 758
>emb|CDY15454.1| BnaA08g27380D [Brassica napus]
Length = 1054
Score = 99.4 bits (246), Expect = 7e-21
Identities = 48/60 (80%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM++
Sbjct: 995 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKTGTMGRKTLLTQEDLEKMAETGVQDMVY 1054
>dbj|BAJ34374.1| unnamed protein product [Eutrema halophilum]
Length = 376
Score = 97.8 bits (242), Expect = 7e-21
Identities = 48/60 (80%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMV-NGVGDMLF 177
SHLRDAHLNLSTDMA+HIAREFLR+MAQPYDK G MG+KTLL+QEDLEKM GV DM +
Sbjct: 317 SHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDMAY 376
>gb|KVH94396.1| ATP-dependent helicase, C-terminal [Cynara cardunculus var.
scolymus]
Length = 591
Score = 99.0 bits (245), Expect = 8e-21
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNGVGDMLF 177
SHLRDAHLNLSTDMAVHIAREFLR+MAQPYDK G GKKTLLSQ+DLEKM NGV M+F
Sbjct: 534 SHLRDAHLNLSTDMAVHIAREFLRKMAQPYDKTGGGGKKTLLSQDDLEKM-NGVEGMMF 591
>ref|XP_019465157.1| PREDICTED: DNA repair helicase XPD-like [Lupinus angustifolius]
Length = 248
Score = 95.1 bits (235), Expect = 1e-20
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +1
Query: 1 SHLRDAHLNLSTDMAVHIAREFLRRMAQPYDKNGAMGKKTLLSQEDLEKMVNG 159
SHL DAHLNLSTDMA+HIAREFLR+MAQPYDK G G+KTLLSQEDLEKMV G
Sbjct: 190 SHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGSGRKTLLSQEDLEKMVEG 242