BLASTX nr result

ID: Rehmannia29_contig00019015 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00019015
         (571 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086011.1| protein CHUP1, chloroplastic isoform X1 [Ses...    64   1e-08
gb|KZV54156.1| hypothetical protein F511_34254 [Dorcoceras hygro...    62   8e-08
ref|XP_011096422.2| LOW QUALITY PROTEIN: protein CHUP1, chloropl...    60   5e-07

>ref|XP_011086011.1| protein CHUP1, chloroplastic isoform X1 [Sesamum indicum]
 ref|XP_011086012.1| protein CHUP1, chloroplastic isoform X2 [Sesamum indicum]
          Length = 663

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/52 (63%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +3

Query: 6   FLESGTIVNLKNETDQVKKDEFVGVVESIERPKHSRSNSDEIP-DTSDGLMG 158
           F+E+G  V++KNE   VKK+EF+GV+ES ERP+HSR NS+EIP +TSD LMG
Sbjct: 222 FIENGRSVHVKNEAP-VKKEEFIGVLESTERPRHSRCNSEEIPAETSDVLMG 272


>gb|KZV54156.1| hypothetical protein F511_34254 [Dorcoceras hygrometricum]
          Length = 645

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 12  ESGTIVNLKNETDQVKKDEFVGVVESIERPKHSRSNSDEIPDTSDGLMG 158
           ESG  ++   E + VKKDEF G+VE IERP+ S  NS+EIP+T+DGLMG
Sbjct: 224 ESGMSMHANIEAETVKKDEFAGLVEGIERPRQSWCNSEEIPETTDGLMG 272


>ref|XP_011096422.2| LOW QUALITY PROTEIN: protein CHUP1, chloroplastic [Sesamum indicum]
          Length = 654

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = +3

Query: 12  ESGTIVNLKNETDQVKKDEFVGVVESIERPKHSRSNSDEIPDTSDGLMGI 161
           E G     K+ET  +KKDE+ G++E  ERP  SR NSDEIPD+SDGLMGI
Sbjct: 218 EGGANATFKSETT-LKKDEYFGILEGTERPGLSRCNSDEIPDSSDGLMGI 266


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