BLASTX nr result

ID: Rehmannia29_contig00018904 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00018904
         (328 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012827537.1| PREDICTED: cyclic nucleotide-gated ion chann...    54   7e-06
ref|XP_012827536.1| PREDICTED: cyclic nucleotide-gated ion chann...    54   7e-06

>ref|XP_012827537.1| PREDICTED: cyclic nucleotide-gated ion channel 4 isoform X2
           [Erythranthe guttata]
          Length = 669

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 317 TSGAVAWRYLKSKKGFFFDLFVILPLPQ 234
           T+G VAW+Y KSKKGFF DLFVILPLPQ
Sbjct: 170 TAGEVAWKYFKSKKGFFLDLFVILPLPQ 197


>ref|XP_012827536.1| PREDICTED: cyclic nucleotide-gated ion channel 4 isoform X1
           [Erythranthe guttata]
 gb|EYU19163.1| hypothetical protein MIMGU_mgv1a002305mg [Erythranthe guttata]
          Length = 689

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 317 TSGAVAWRYLKSKKGFFFDLFVILPLPQ 234
           T+G VAW+Y KSKKGFF DLFVILPLPQ
Sbjct: 170 TAGEVAWKYFKSKKGFFLDLFVILPLPQ 197


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