BLASTX nr result

ID: Rehmannia29_contig00018724 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00018724
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    55   3e-08
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    55   1e-07
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    59   1e-07
ref|XP_009791954.1| PREDICTED: uncharacterized protein LOC104239...    55   8e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 55.1 bits (131), Expect(2) = 3e-08
 Identities = 28/71 (39%), Positives = 48/71 (67%)
 Frame = +2

Query: 32  LKEGNVYVLKDFIVAHYTDKCKTTSMKYKIMFHRKTYIFQLDENSLLRFL*NFKSFRELS 211
           LK+G+++ +K+ IVA    K KTT+ KYKI F  KT++ ++ ++S    + +FKSF ++ 
Sbjct: 54  LKDGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCEIFDDSFPSIMFDFKSFNDVK 113

Query: 212 SIEEVDGTMLF 244
           +  E++ TMLF
Sbjct: 114 N-AEIEETMLF 123



 Score = 30.4 bits (67), Expect(2) = 3e-08
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 334 IIGKVIAMQFTQKKEFGGKLTHFIDI 411
           +IG+V+A    Q +EFGG+ T  +DI
Sbjct: 125 VIGQVVARDSPQSREFGGRETRLLDI 150


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 29/71 (40%), Positives = 47/71 (66%)
 Frame = +2

Query: 32  LKEGNVYVLKDFIVAHYTDKCKTTSMKYKIMFHRKTYIFQLDENSLLRFL*NFKSFRELS 211
           LKEG+++ +K+ IVA    K KTT+ KYKI F  KT++ ++ ++S    + +FKSF  + 
Sbjct: 134 LKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVK 193

Query: 212 SIEEVDGTMLF 244
           +  E++ TMLF
Sbjct: 194 N-AEIEETMLF 203



 Score = 28.1 bits (61), Expect(2) = 1e-07
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 334 IIGKVIAMQFTQKKEFGGKLTHFIDI 411
           +IG+V+A    Q KEFGG+ T  + I
Sbjct: 205 VIGQVVARDSPQSKEFGGRETRLLYI 230


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = +2

Query: 32  LKEGNVYVLKDFIVAHYTDKCKTTSMKYKIMFHRKTYIFQLDENSLLRFL*NFKSFRELS 211
           LKEG+++ +K+ IVA    K KTT+ KYKI F  KT++ ++ ++S    + +FKSF  + 
Sbjct: 54  LKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVK 113

Query: 212 SIEEVDGTMLFGMYRKF 262
           +  E+D TMLFG   +F
Sbjct: 114 N-AEIDETMLFGEPTEF 129


>ref|XP_009791954.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_009791955.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_009791957.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_009791958.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_009791959.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_009791960.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
 ref|XP_016437979.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
 ref|XP_016437980.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
 ref|XP_016437981.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
 ref|XP_016437982.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
 ref|XP_016437983.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
 ref|XP_016437984.1| PREDICTED: uncharacterized protein LOC107763975 [Nicotiana tabacum]
          Length = 299

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/78 (33%), Positives = 47/78 (60%)
 Frame = +2

Query: 11  VTQF*KQLKEGNVYVLKDFIVAHYTDKCKTTSMKYKIMFHRKTYIFQLDENSLLRFL*NF 190
           + +F +Q+KE  +Y++K+F+V     K KT   K+K+MF  KT + ++ +      +  F
Sbjct: 17  IQRFNQQIKEMGLYIMKNFVVCPNNMKLKTKDHKFKLMFTHKTTVEEIHDPHFNMCIFKF 76

Query: 191 KSFRELSSIEEVDGTMLF 244
           K++ +LS+ +E D T LF
Sbjct: 77  KTYEQLSNPQEFDNTELF 94


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