BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00017593
         (1773 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN04091.1| RNA polymerase II, second largest subunit [Handro...   908   0.0  
ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subuni...   877   0.0  
ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV a...   870   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...   771   0.0  
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...   747   0.0  
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...   745   0.0  
ref|XP_016433825.1| PREDICTED: DNA-directed RNA polymerases IV a...   745   0.0  
ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV a...   744   0.0  
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   744   0.0  
ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV a...   742   0.0  
gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [...   741   0.0  
ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV a...   741   0.0  
gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [...   739   0.0  
gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]   739   0.0  
ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV a...   736   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...   735   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   733   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit, partial...   726   0.0  
ref|XP_019167919.1| PREDICTED: DNA-directed RNA polymerases IV a...   722   0.0  
emb|CDP07172.1| unnamed protein product [Coffea canephora]            720   0.0  

>gb|PIN04091.1| RNA polymerase II, second largest subunit [Handroanthus
            impetiginosus]
          Length = 1208

 Score =  908 bits (2346), Expect = 0.0
 Identities = 436/555 (78%), Positives = 490/555 (88%), Gaps = 1/555 (0%)
 Frame = -2

Query: 1664 MGAWDFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 1488
            MG WDFLEEAGPSS +EKF+NGST+M++            DEL  A+Q LDE +LK FC+
Sbjct: 1    MGPWDFLEEAGPSSIREKFSNGSTRMDVDDDIDFDYSDSDDELDCALQDLDESFLKTFCK 60

Query: 1487 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 1308
            KA+T FFE+YGLISHQINSYNDFVKHGIQ++FDS+GEIT+EP +DPSKKGDGDWR ASLK
Sbjct: 61   KASTQFFEQYGLISHQINSYNDFVKHGIQKLFDSIGEITIEPGYDPSKKGDGDWRRASLK 120

Query: 1307 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 1128
            FGKVTLE PTF+ GEKFSSVDG +E+L+L PR+ARLQNMTYSSRIKVET LQVYT+GLSR
Sbjct: 121  FGKVTLERPTFWTGEKFSSVDGAKEYLELFPRHARLQNMTYSSRIKVETDLQVYTEGLSR 180

Query: 1127 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKG 948
            SDKFKTGV+ FV+KT+LN+YHS+V FGRLPVMVKSDLCWMN+SEKRDCEFDQGGYFVIKG
Sbjct: 181  SDKFKTGVDKFVEKTLLNEYHSEVNFGRLPVMVKSDLCWMNASEKRDCEFDQGGYFVIKG 240

Query: 947  AEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFY 768
            AEKTFIAQEQ+CL RLWV K P WT+AYRP+SKRKR+YIKLVPKVEN++G DKILTVYFY
Sbjct: 241  AEKTFIAQEQICLKRLWVAKDPMWTIAYRPISKRKRIYIKLVPKVENIVGGDKILTVYFY 300

Query: 767  VTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVK 588
            VTE+PIW+LFFALGV ND+EVV LID D+EDSAI NIL+ SIYDADKKYEGFRKE NA+K
Sbjct: 301  VTEMPIWLLFFALGVPNDKEVVKLIDADVEDSAIVNILVGSIYDADKKYEGFRKEKNAIK 360

Query: 587  HIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRD 408
            HI++LM++ + PP ESVEECIKNYLFP+L SP QKAC LAYMVKCLLEAYRGRRKVDNRD
Sbjct: 361  HIKELMQACRFPPSESVEECIKNYLFPHLGSPEQKACFLAYMVKCLLEAYRGRRKVDNRD 420

Query: 407  DXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLS 228
            D                L++HIKHAER MVK+IQRDL RDRE+Q I+HYLDASIITNGLS
Sbjct: 421  DLRNKRLELAGELLERELRVHIKHAERRMVKAIQRDLYRDREVQSIDHYLDASIITNGLS 480

Query: 227  RAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 48
            RAFSTGAWSHPYK+MER+SGVVATIRRTNPLQATADMRKTRQQV+YTGRVGDARYPHPSH
Sbjct: 481  RAFSTGAWSHPYKRMERISGVVATIRRTNPLQATADMRKTRQQVTYTGRVGDARYPHPSH 540

Query: 47   WGKICFLSTPDGENC 3
            WGK+CFLSTPDGENC
Sbjct: 541  WGKLCFLSTPDGENC 555


>ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subunit 2 [Sesamum indicum]
          Length = 1207

 Score =  877 bits (2266), Expect = 0.0
 Identities = 424/555 (76%), Positives = 484/555 (87%), Gaps = 1/555 (0%)
 Frame = -2

Query: 1664 MGAWDFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 1488
            MGA DFLEEAGPSS  EKF+NGS +M+I            DEL S++Q LDEG+LK FC+
Sbjct: 1    MGARDFLEEAGPSSFNEKFSNGSFRMDIDDDMDFDCSDSDDELDSSLQDLDEGFLKSFCK 60

Query: 1487 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 1308
            KA+T+FF++YGLISHQINSYNDFV++GIQ+VFDS+GEI +EP +DPSKKGDGDWR ASLK
Sbjct: 61   KASTAFFDQYGLISHQINSYNDFVRNGIQKVFDSIGEILIEPGYDPSKKGDGDWRRASLK 120

Query: 1307 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 1128
            FGKVTLE P F+ GEKFSSVDG +E+L L PR+ARLQNMTYSSRIKVETHL+V+T+ LSR
Sbjct: 121  FGKVTLEKPKFWTGEKFSSVDGAKEYLNLLPRHARLQNMTYSSRIKVETHLEVFTESLSR 180

Query: 1127 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKG 948
            SDKFKTGVE F++KT+L++YH+DV FGRLPVMVKSDLCWM+  E+RDCEF+QGGYFVIKG
Sbjct: 181  SDKFKTGVEKFIEKTLLHEYHTDVNFGRLPVMVKSDLCWMSELEERDCEFEQGGYFVIKG 240

Query: 947  AEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFY 768
            AEKTFIAQEQ+CL RLWV K+P WT++YRPVSKRKR+++KLVPKVE++ G +KILTVYFY
Sbjct: 241  AEKTFIAQEQICLKRLWVAKSPAWTISYRPVSKRKRIFVKLVPKVEHITGGEKILTVYFY 300

Query: 767  VTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVK 588
            VTEIPIW+LFFALGV NDREVV +IDLD+EDSAI+NILIASIYDAD+KYEGFRK GNA K
Sbjct: 301  VTEIPIWLLFFALGVPNDREVVKMIDLDVEDSAISNILIASIYDADRKYEGFRKGGNAQK 360

Query: 587  HIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRD 408
             I++LM+  + PP ESVEECI NYLFP+L SP QKAC LAYMVKCLLEAYRGRRKVDNRD
Sbjct: 361  FIKELMQGCRFPPTESVEECITNYLFPHLKSPEQKACFLAYMVKCLLEAYRGRRKVDNRD 420

Query: 407  DXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLS 228
            D                LK+HIKHAER MVK+IQRDL  DRE+Q I+HYLDASIITNGLS
Sbjct: 421  DLRNKRLELAGELLERELKVHIKHAERRMVKAIQRDLYNDREVQSIDHYLDASIITNGLS 480

Query: 227  RAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 48
            RAFSTGAWSHPYK+MER+SG+VATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH
Sbjct: 481  RAFSTGAWSHPYKRMERISGIVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 540

Query: 47   WGKICFLSTPDGENC 3
            WGKICFLSTPDGENC
Sbjct: 541  WGKICFLSTPDGENC 555


>ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
            [Erythranthe guttata]
 gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Erythranthe guttata]
          Length = 1211

 Score =  870 bits (2249), Expect = 0.0
 Identities = 419/555 (75%), Positives = 484/555 (87%), Gaps = 1/555 (0%)
 Frame = -2

Query: 1664 MGAWDFLEEAGPSSK-EKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 1488
            MGAWDFLEEAGPSSK +KF+NG+TQM+I            DEL +AMQ L EG+LK+ CR
Sbjct: 1    MGAWDFLEEAGPSSKNDKFSNGTTQMDIDEDIEFDSSESEDELDTAMQELSEGFLKVSCR 60

Query: 1487 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 1308
            KA+T+FF++YGLISHQINSYNDFV HGIQ+VFDS+GEI VEP +DPSKKG+GDW+ A LK
Sbjct: 61   KASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLK 120

Query: 1307 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 1128
            FGKVTLE PTF+ GEKFSSVDG +++L+L PR+ARLQNMTY+++IKVETHLQVYTKGL+R
Sbjct: 121  FGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNR 180

Query: 1127 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKG 948
            SDKF TGVEN V+KT+LN+YH++V FGRLPVMVKSDLCWM S +K+DCEFDQGGYFVIKG
Sbjct: 181  SDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGGYFVIKG 240

Query: 947  AEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFY 768
            AEKTFIAQEQ+CL RLWVTK P+WTV+YRPV++R RVYIKLVPK+E+V+GADKILTVYFY
Sbjct: 241  AEKTFIAQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLVPKMEHVIGADKILTVYFY 300

Query: 767  VTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVK 588
            VTEI +WVLFFALG+ ND+EVV LIDLDIEDS IANILIASIYDADKKYEGFRKEGN+ K
Sbjct: 301  VTEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKKYEGFRKEGNSSK 360

Query: 587  HIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRD 408
            HI++LM++ K PP ES+E+ IKNYLFP+L +P QKAC L YMVKCLLEAY+GRRKV+NRD
Sbjct: 361  HIKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRD 420

Query: 407  DXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLS 228
            D                L++HIKHAER M K++QRDL RDRE+Q I+ YLDASI+TNGLS
Sbjct: 421  DFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLS 480

Query: 227  RAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSH 48
            RAFSTGAW HP+K+MER SGVVATIRRTNPLQA ADMRKTRQQVSYTGRVGDARYPHPSH
Sbjct: 481  RAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSH 540

Query: 47   WGKICFLSTPDGENC 3
            WGK+CFLSTPDGENC
Sbjct: 541  WGKVCFLSTPDGENC 555


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score =  771 bits (1992), Expect = 0.0
 Identities = 372/550 (67%), Positives = 452/550 (82%), Gaps = 3/550 (0%)
 Frame = -2

Query: 1643 EEAGPS-SKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCRKAATSFF 1467
            ++ GPS SK+K  NG+T M+I            D++ +AMQ LDEG +K FCRKAATSFF
Sbjct: 2    DDVGPSTSKDKLFNGNTFMDIDEDIDFDLSDSDDDIDNAMQDLDEGVVKSFCRKAATSFF 61

Query: 1466 EKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD-GDWRYASLKFGKVTL 1290
            E++GLISHQ+NSYN+F+ HGI Q+F S+GEI VEP +DPSK+GD G+W+ ASLKFGKV L
Sbjct: 62   EQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSKRGDDGEWQKASLKFGKVNL 121

Query: 1289 EHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV-YTKGLSRSDKFK 1113
            E P+F+ GEKFSS +G +++L+L P++ARLQNMTY++RIKVETHL+V YT+GL RS+KF 
Sbjct: 122  ERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKVETHLEVVYTEGLVRSEKFT 181

Query: 1112 TGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVIKGAEKTF 933
            TGV   V +T L     ++ FG+LPVMV SDLCW+ S+ K+DCEFDQGGYF+IKGAEKTF
Sbjct: 182  TGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKKDCEFDQGGYFIIKGAEKTF 241

Query: 932  IAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVPKVENVMGADKILTVYFYVTEIP 753
            IAQEQ+CL RLWV+K PTWT++YRP++KR+R+Y+KLVPKVE+    +KILTVYF   E+P
Sbjct: 242  IAQEQICLKRLWVSKDPTWTISYRPITKRRRIYLKLVPKVESAPVGEKILTVYFSFVEMP 301

Query: 752  IWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVKHIEDL 573
            IW+LFFALG  ND+EVV +ID+DIEDSAIANIL+ASI+DAD KYEGFRK G+A+KH++DL
Sbjct: 302  IWILFFALGARNDKEVVKMIDMDIEDSAIANILLASIHDADSKYEGFRKNGSAIKHLKDL 361

Query: 572  MKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRDDXXXX 393
            M+  K PP ESVEE  + +LFP+L S  QKAC LAYMVKCLLE Y+GRRKVDNRDD    
Sbjct: 362  MQEGKYPPTESVEEYFQIHLFPHLKSSVQKACFLAYMVKCLLECYKGRRKVDNRDDLRNK 421

Query: 392  XXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLSRAFST 213
                        L+I IKHAER M++S+QRDLD+ R+LQ I+HYLDASIITNGLSRAFST
Sbjct: 422  RLELAGELLERELRIQIKHAERRMMRSMQRDLDKGRDLQTIDHYLDASIITNGLSRAFST 481

Query: 212  GAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSHWGKIC 33
            GAWSHPYK+MER+SG+VAT+RRTNPLQA ADMRKTRQQVSYTGRVGDARYPHPSHWGKIC
Sbjct: 482  GAWSHPYKRMERISGIVATLRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGKIC 541

Query: 32   FLSTPDGENC 3
            FLSTPDGENC
Sbjct: 542  FLSTPDGENC 551


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score =  747 bits (1928), Expect = 0.0
 Identities = 379/568 (66%), Positives = 445/568 (78%), Gaps = 12/568 (2%)
 Frame = -2

Query: 1670 IEMGAWDFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQG 1521
            I M   D ++E G SS K K +NGS  M        E+            D L  A ++ 
Sbjct: 9    IHMTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKE 68

Query: 1520 LDEGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKK 1341
            L EG+LK FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+
Sbjct: 69   LGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKR 128

Query: 1340 GDGDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVET 1161
            GDGDW++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VET
Sbjct: 129  GDGDWKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVET 187

Query: 1160 HLQVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCE 981
            H+QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCE
Sbjct: 188  HVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCE 247

Query: 980  FDQGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVEN 807
            FD GGYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E+
Sbjct: 248  FDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEH 307

Query: 806  VMGADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADK 627
            + GA+K LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADK
Sbjct: 308  IKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADK 367

Query: 626  KYEGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLL 447
            K E FRK   A+ +++ L+K  + PP+ESVEECI+ YLFPNLS  +QKA  L YMVK LL
Sbjct: 368  KCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLL 427

Query: 446  EAYRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIE 267
             A+ GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIE
Sbjct: 428  HAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIE 487

Query: 266  HYLDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYT 87
            HYLDASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YT
Sbjct: 488  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYT 547

Query: 86   GRVGDARYPHPSHWGKICFLSTPDGENC 3
            G+VGDARYPHPSHWGK+CFLSTPDGENC
Sbjct: 548  GKVGDARYPHPSHWGKVCFLSTPDGENC 575


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score =  745 bits (1924), Expect = 0.0
 Identities = 377/562 (67%), Positives = 443/562 (78%), Gaps = 12/562 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 1503
            D ++E G SS K K +NGS  M        E+            D L  A ++ L EG+L
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFL 64

Query: 1502 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 1323
            K FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+GDGDW+
Sbjct: 65   KNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWK 124

Query: 1322 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 1143
            +AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 125  HASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 1142 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 963
            K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD GGY
Sbjct: 184  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 243

Query: 962  FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 789
            F++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ GA+K
Sbjct: 244  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEK 303

Query: 788  ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 609
             LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADKK E FR
Sbjct: 304  ALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFR 363

Query: 608  KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 429
            K   A+ +++ L+K  + PP+ESVEECI+ YLFPNLS  +QKA  L YMVK LL A+ GR
Sbjct: 364  KGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGR 423

Query: 428  RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 249
            RKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHYLDAS
Sbjct: 424  RKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDAS 483

Query: 248  IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 69
            IITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+VGDA
Sbjct: 484  IITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDA 543

Query: 68   RYPHPSHWGKICFLSTPDGENC 3
            RYPHPSHWGK+CFLSTPDGENC
Sbjct: 544  RYPHPSHWGKVCFLSTPDGENC 565


>ref|XP_016433825.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tabacum]
          Length = 1243

 Score =  745 bits (1924), Expect = 0.0
 Identities = 377/562 (67%), Positives = 443/562 (78%), Gaps = 12/562 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 1503
            D ++E G SS K K +NGS  M        E+            D L  A ++ L EG+L
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFL 64

Query: 1502 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 1323
            K FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+GDGDW+
Sbjct: 65   KNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWK 124

Query: 1322 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 1143
            +AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 125  HASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 1142 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 963
            K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD GGY
Sbjct: 184  KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGY 243

Query: 962  FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 789
            F++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ GA+K
Sbjct: 244  FIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEK 303

Query: 788  ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 609
             LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADKK E FR
Sbjct: 304  ALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFR 363

Query: 608  KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 429
            K   A+ +++ L+K  + PP+ESVEECI+ YLFPNLS  +QKA  L YMVK LL A+ GR
Sbjct: 364  KGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGR 423

Query: 428  RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 249
            RKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHYLDAS
Sbjct: 424  RKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDAS 483

Query: 248  IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 69
            IITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+VGDA
Sbjct: 484  IITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDA 543

Query: 68   RYPHPSHWGKICFLSTPDGENC 3
            RYPHPSHWGK+CFLSTPDGENC
Sbjct: 544  RYPHPSHWGKVCFLSTPDGENC 565


>ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tabacum]
          Length = 1220

 Score =  744 bits (1921), Expect = 0.0
 Identities = 373/566 (65%), Positives = 441/566 (77%), Gaps = 16/566 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-------------AMQGLD 1515
            D ++E G SS K K +NGS  M+              +                 ++ L 
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPIKELG 64

Query: 1514 EGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD 1335
            EG+LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GD
Sbjct: 65   EGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 124

Query: 1334 GDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHL 1155
            GDW++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+
Sbjct: 125  GDWKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHV 183

Query: 1154 QVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFD 975
            QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD
Sbjct: 184  QVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFD 243

Query: 974  QGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVM 801
             GGYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ 
Sbjct: 244  HGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIK 303

Query: 800  GADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKY 621
            G +K LTVYF V E+PIW+LFFALGVS+DREVV+LID+DIED+ I NIL+ASI+DADKK 
Sbjct: 304  GVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKC 363

Query: 620  EGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEA 441
            E FRK   A+ +++ L+K  + PP+ESVEECIK YLFPNLS  +QKA  L YMVK LL A
Sbjct: 364  EDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHA 423

Query: 440  YRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHY 261
            + GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHY
Sbjct: 424  FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHY 483

Query: 260  LDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGR 81
            LDASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+
Sbjct: 484  LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGK 543

Query: 80   VGDARYPHPSHWGKICFLSTPDGENC 3
            VGDARYPHPSHWGK+CFLSTPDGENC
Sbjct: 544  VGDARYPHPSHWGKVCFLSTPDGENC 569


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana
            tomentosiformis]
          Length = 1220

 Score =  744 bits (1921), Expect = 0.0
 Identities = 373/566 (65%), Positives = 441/566 (77%), Gaps = 16/566 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-------------AMQGLD 1515
            D ++E G SS K K +NGS  M+              +                 ++ L 
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPIKELG 64

Query: 1514 EGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD 1335
            EG+LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GD
Sbjct: 65   EGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 124

Query: 1334 GDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHL 1155
            GDW++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+
Sbjct: 125  GDWKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHV 183

Query: 1154 QVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFD 975
            QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD
Sbjct: 184  QVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFD 243

Query: 974  QGGYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVM 801
             GGYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ 
Sbjct: 244  HGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIK 303

Query: 800  GADKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKY 621
            G +K LTVYF V E+PIW+LFFALGVS+DREVV+LID+DIED+ I NIL+ASI+DADKK 
Sbjct: 304  GVEKALTVYFSVAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKC 363

Query: 620  EGFRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEA 441
            E FRK   A+ +++ L+K  + PP+ESVEECIK YLFPNLS  +QKA  L YMVK LL A
Sbjct: 364  EDFRKGKKALAYVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHA 423

Query: 440  YRGRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHY 261
            + GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHY
Sbjct: 424  FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHY 483

Query: 260  LDASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGR 81
            LDASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+
Sbjct: 484  LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGK 543

Query: 80   VGDARYPHPSHWGKICFLSTPDGENC 3
            VGDARYPHPSHWGK+CFLSTPDGENC
Sbjct: 544  VGDARYPHPSHWGKVCFLSTPDGENC 569


>ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 ref|XP_019252735.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 ref|XP_019252739.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata]
 gb|OIT08688.1| dna-directed rna polymerases iv and v subunit 2 [Nicotiana attenuata]
          Length = 1218

 Score =  742 bits (1915), Expect = 0.0
 Identities = 372/564 (65%), Positives = 441/564 (78%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELG-----------SAMQGLDEG 1509
            D ++E G SS K K +NGS  M+              +             + ++ L EG
Sbjct: 5    DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDEDNDDNLDVAPIKELGEG 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKV+LE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+ V
Sbjct: 125  WKHASVKFGKVSLERPRFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVLV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNRVDKPDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+ +PTWTVAYRPV+KR RVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGV 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K LTVYF V E+PIW+LFFALGVS+DREVVNLID+DIED+ I NIL+ASI+DADKK E 
Sbjct: 304  EKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCED 363

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+ +++ L+K  + PP+ESVEECI++YLFPNLS  +QKA  L YMVK LL A+ 
Sbjct: 364  FRKGKKALAYVDRLIKGCRFPPQESVEECIQHYLFPNLSGLKQKARFLGYMVKSLLHAFI 423

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKVDNRDD                L+ HIKHAER M+K++QRDL  DR++QPIEHYLD
Sbjct: 424  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLD 483

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVATIRRTNPLQ TADMRKTRQQV+YTG+VG
Sbjct: 484  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVG 543

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 544  DARYPHPSHWGKVCFLSTPDGENC 567


>gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum annuum]
          Length = 1217

 Score =  741 bits (1913), Expect = 0.0
 Identities = 372/564 (65%), Positives = 439/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 1509
            DF+EE G SS KEK +NGS +M+              +               M+ L EG
Sbjct: 5    DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLMKELGEG 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  EK DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVEKPDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVY+KL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYVKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIW+LFFALGVS+D+EVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWILFFALGVSSDKEVVNLIDVDIEDTRIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+  ++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCL+ ++ 
Sbjct: 363  FRKGKKALAFVDRLIKSCKFPPQESVEECIKAYLFPNLSGFKQKARFLGYMVKCLVHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKV+NRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRKTRQQV+YTGRVG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGRVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKVCFLSTPDGENC 566


>ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Capsicum annuum]
 ref|XP_016563843.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Capsicum annuum]
          Length = 1217

 Score =  741 bits (1912), Expect = 0.0
 Identities = 372/564 (65%), Positives = 439/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 1509
            DF+EE G SS KEK +NGS +M+              +               M+ L EG
Sbjct: 5    DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLMKELGEG 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKENLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  EK DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVEKPDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVY+KL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYVKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIW+LFFALGVS+D+EVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWILFFALGVSSDKEVVNLIDVDIEDTRIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+  ++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCL+ ++ 
Sbjct: 363  FRKGKKALAFVDRLIKSCKFPPQESVEECIKAYLFPNLSGFKQKARFLGYMVKCLVHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKV+NRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRKTRQQV+YTGRVG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGRVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKVCFLSTPDGENC 566


>gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum chinense]
          Length = 1217

 Score =  739 bits (1909), Expect = 0.0
 Identities = 371/564 (65%), Positives = 439/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 1509
            DF+EE G SS KEK +NGS +M+              +               ++ L EG
Sbjct: 5    DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLIKELGEG 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  EK DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVEKPDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVY+KL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYVKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIW+LFFALGVS+D+EVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWILFFALGVSSDKEVVNLIDVDIEDTRIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+  ++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCL+ ++ 
Sbjct: 363  FRKGKKALAFVDRLIKSCKFPPQESVEECIKAYLFPNLSGFKQKARFLGYMVKCLVHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKV+NRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRKTRQQV+YTGRVG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGRVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKVCFLSTPDGENC 566


>gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]
          Length = 1217

 Score =  739 bits (1909), Expect = 0.0
 Identities = 371/564 (65%), Positives = 439/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 1509
            DF+EE G SS KEK +NGS +M+              +               ++ L EG
Sbjct: 5    DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDEGEDEDDSHDMVLIKELGEG 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  EK DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVEKPDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVY+KL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYVKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIW+LFFALGVS+D+EVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWILFFALGVSSDKEVVNLIDVDIEDTRIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+  ++ L+KS K PP+ESVEECIK YLFPNLS  +QKA  L YMVKCL+ ++ 
Sbjct: 363  FRKGKKALAFVDRLIKSCKFPPQESVEECIKAYLFPNLSGFKQKARFLGYMVKCLVHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKV+NRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRKTRQQV+YTGRVG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGRVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKVCFLSTPDGENC 566


>ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum pennellii]
          Length = 1217

 Score =  736 bits (1899), Expect = 0.0
 Identities = 370/564 (65%), Positives = 438/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 1509
            D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENC 566


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score =  735 bits (1897), Expect = 0.0
 Identities = 370/564 (65%), Positives = 438/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 1509
            D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS VDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENC 566


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  733 bits (1893), Expect = 0.0
 Identities = 369/564 (65%), Positives = 437/564 (77%), Gaps = 14/564 (2%)
 Frame = -2

Query: 1652 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 1509
            D +EE G SS KEK +NGS +M+              +               ++ L E 
Sbjct: 5    DIMEEVGCSSGKEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGET 64

Query: 1508 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 1329
            YLK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65   YLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 1328 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 1149
            W++AS+KFGKVTLE P F+AGEKFS+ DG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125  WKHASVKFGKVTLERPKFWAGEKFSA-DGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 1148 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQG 969
            YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD G
Sbjct: 184  YTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 243

Query: 968  GYFVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGA 795
            GYF++KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G 
Sbjct: 244  GYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 303

Query: 794  DKILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEG 615
            +K L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E 
Sbjct: 304  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 362

Query: 614  FRKEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYR 435
            FRK   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ 
Sbjct: 363  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 422

Query: 434  GRRKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLD 255
            GRRKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLD
Sbjct: 423  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 482

Query: 254  ASIITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVG 75
            ASIITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VG
Sbjct: 483  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 542

Query: 74   DARYPHPSHWGKICFLSTPDGENC 3
            DARYPHPSHWGK+CFLSTPDGENC
Sbjct: 543  DARYPHPSHWGKLCFLSTPDGENC 566


>gb|AAY68206.1| RNA polymerase IV second largest subunit, partial [Solanum
            lycopersicum]
          Length = 1123

 Score =  726 bits (1874), Expect = 0.0
 Identities = 367/562 (65%), Positives = 434/562 (77%), Gaps = 14/562 (2%)
 Frame = -2

Query: 1646 LEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEGYL 1503
            +EE G SS KEK +NGST+M+              +               ++ L E +L
Sbjct: 1    MEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGESFL 60

Query: 1502 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 1323
            K FC+KA+T FFEKYG ISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGDW+
Sbjct: 61   KNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWK 120

Query: 1322 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 1143
            +AS+KFGKVTLE P F+AGEKFS V G +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 121  HASVKFGKVTLERPKFWAGEKFS-VGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYT 179

Query: 1142 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGY 963
            K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCWMN  +K DCEFD GGY
Sbjct: 180  KKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGY 239

Query: 962  FVIKGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADK 789
            F+ KGAEKTFIAQEQ+CL RLWV+  PTW V YRP  KRKRVYIKL    K+E++ G +K
Sbjct: 240  FIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEK 299

Query: 788  ILTVYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFR 609
             L+VY  + E+PIWVLFFALGVS+DREVVNLID+DIED+ I NIL+ASI++ADK  E FR
Sbjct: 300  ALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFR 358

Query: 608  KEGNAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGR 429
            K   A+ +++ L+K+ K PP+ESVEECI  YLFPNLS  +QKA  L YMVKCLL ++ GR
Sbjct: 359  KGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGR 418

Query: 428  RKVDNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDAS 249
            RKVDNRDD                L+ HIKHAER MVK++QRDL  DR++QPIEHYLDAS
Sbjct: 419  RKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDAS 478

Query: 248  IITNGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDA 69
            IITNGLSRAFSTG W HPYK+MERVSGVVAT+RRTNPLQ TADMRK+RQQV+YTG+VGDA
Sbjct: 479  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDA 538

Query: 68   RYPHPSHWGKICFLSTPDGENC 3
            RYPHPSHWGK+CFLSTPDGENC
Sbjct: 539  RYPHPSHWGKLCFLSTPDGENC 560


>ref|XP_019167919.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Ipomoea
            nil]
          Length = 1214

 Score =  722 bits (1863), Expect = 0.0
 Identities = 356/550 (64%), Positives = 434/550 (78%), Gaps = 8/550 (1%)
 Frame = -2

Query: 1628 SSKEKFANGSTQMEIXXXXXXXXXXXXDEL--GSAMQ--GLDEGYLKMFCRKAATSFFEK 1461
            + KEK +NGS +M+I            DE    +A+Q   L++  L  FC+K +T+FF+K
Sbjct: 9    AGKEKISNGSEKMDIDFEDLEFDEEEDDEPFDAAALQEMNLNKKKLADFCKKVSTTFFDK 68

Query: 1460 YGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLKFGKVTLEHP 1281
            YGLISHQINSYNDF+KHGIQ+VFDS+GEI VEP +DPSKKGD DWRYA++KFGKVT+  P
Sbjct: 69   YGLISHQINSYNDFIKHGIQRVFDSIGEIVVEPGYDPSKKGDNDWRYAAIKFGKVTVSRP 128

Query: 1280 TFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSRSDKFKTGVE 1101
             F+ GEKFS  DG +E+L+L PR+ARLQ MTYS+RI V+THLQVYTK  +RSDKFKTG++
Sbjct: 129  MFWTGEKFSQ-DGGEEYLQLWPRHARLQFMTYSARITVQTHLQVYTKKRTRSDKFKTGID 187

Query: 1100 NFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKR-DCEFDQGGYFVIKGAEKTFIAQ 924
             FV K    +   D++ GRLPVMV SDLCWM+   K+ DCEFD GGYF++KGAEKTFIAQ
Sbjct: 188  QFVSKECEMEDTRDLLIGRLPVMVNSDLCWMSDGNKKPDCEFDHGGYFIVKGAEKTFIAQ 247

Query: 923  EQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLV--PKVENVM-GADKILTVYFYVTEIP 753
            EQ+CL RLWV   P+W V+YRPVSKRKRVYIKL   PKVE V+ G +K+LTVYF VTE+P
Sbjct: 248  EQICLKRLWVASNPSWMVSYRPVSKRKRVYIKLTETPKVEPVVRGGEKVLTVYFSVTEMP 307

Query: 752  IWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEGNAVKHIEDL 573
            IW+ FFALGVS+DREVVNLID+D +D+ I NIL+ASI+DAD K E FRK+  A+  +  L
Sbjct: 308  IWIFFFALGVSSDREVVNLIDVDTKDTEIVNILVASIHDADSKCESFRKQPVALNFVAQL 367

Query: 572  MKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKVDNRDDXXXX 393
            M++ + PP+ES+E+CI N+LFP+L+S +QKA  L YMVKCLL+AY G+RK DNRDD    
Sbjct: 368  MQNCRFPPQESIEDCINNFLFPSLNSFKQKARFLGYMVKCLLQAYSGKRKADNRDDFRNK 427

Query: 392  XXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIITNGLSRAFST 213
                        L++H+KH ER+M K++QRDL  DR+LQ IEHY+DASI+TNGL RAFST
Sbjct: 428  RLELASELLERELRVHLKHVERVMTKAMQRDLYGDRQLQSIEHYVDASIVTNGLCRAFST 487

Query: 212  GAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYPHPSHWGKIC 33
            GAWSHPYK+MERVSGVVA +RRTNPLQ TADMRKTRQQVSYTG+VGDARYPHPSHWGK+C
Sbjct: 488  GAWSHPYKRMERVSGVVANLRRTNPLQMTADMRKTRQQVSYTGKVGDARYPHPSHWGKVC 547

Query: 32   FLSTPDGENC 3
            FLSTPDGENC
Sbjct: 548  FLSTPDGENC 557


>emb|CDP07172.1| unnamed protein product [Coffea canephora]
          Length = 1230

 Score =  720 bits (1858), Expect = 0.0
 Identities = 358/559 (64%), Positives = 435/559 (77%), Gaps = 3/559 (0%)
 Frame = -2

Query: 1670 IEMGAWDFLEEAG-PSSKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMF 1494
            I M A D ++++G  SSK+   + S  M+I            + +   ++ L E +LK F
Sbjct: 24   ILMDASDAIKDSGIGSSKDNLFDQSLSMDIDDIDFDDFDDMLNSI--TLRELGEDFLKKF 81

Query: 1493 CRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYAS 1314
            C+KAAT+FFE+YG ISHQINSYN+FVK+ IQ+VFDSVGEI VEP FDPSK+GDGDW+YAS
Sbjct: 82   CKKAATAFFEQYGFISHQINSYNNFVKYRIQEVFDSVGEIVVEPGFDPSKRGDGDWKYAS 141

Query: 1313 LKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGL 1134
            +KFGKV LE P  + GEK    +G  E+LK+ PR+ARLQNMTYS+RIKVETH+QVYTK L
Sbjct: 142  IKFGKVILEKPDIWIGEKLFG-EGKNEYLKVLPRHARLQNMTYSARIKVETHVQVYTKKL 200

Query: 1133 SRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCWMNSSEKRDCEFDQGGYFVI 954
             RSDK KTG+  +V+     +   ++I GRLPVMV+S+LCWMN +EK DCEFD GGYF+I
Sbjct: 201  LRSDKAKTGMAEYVENHCEKEEKKEIIIGRLPVMVRSELCWMNEAEKDDCEFDHGGYFII 260

Query: 953  KGAEKTFIAQEQMCLSRLWVTKTPTWTVAYRPVSKRKRVYIKLVP--KVENVMGADKILT 780
            KGAEKTFIAQEQ+C+ RLW+++ P W V+YRP++KRKRVY+KLV   K E+++G +K+L+
Sbjct: 261  KGAEKTFIAQEQICMIRLWLSRVPNWMVSYRPIAKRKRVYLKLVSNSKFESIIGGEKVLS 320

Query: 779  VYFYVTEIPIWVLFFALGVSNDREVVNLIDLDIEDSAIANILIASIYDADKKYEGFRKEG 600
            VYF V E+P+W+LFFALG S+DREVV+LI+LDIED+ IANIL  SIYDAD     FR+  
Sbjct: 321  VYFAVAEMPVWILFFALGASSDREVVDLINLDIEDTKIANILTESIYDADDNCTDFRRGK 380

Query: 599  NAVKHIEDLMKSVKSPPKESVEECIKNYLFPNLSSPRQKACLLAYMVKCLLEAYRGRRKV 420
            NA+ H+  L+K+ K PP E VEECI+N LFPNL+  +QKA  L YMVKCLLEAY GRRKV
Sbjct: 381  NALDHVHKLLKNCKFPPAEPVEECIRNLLFPNLTGFKQKARFLGYMVKCLLEAYTGRRKV 440

Query: 419  DNRDDXXXXXXXXXXXXXXXXLKIHIKHAERLMVKSIQRDLDRDRELQPIEHYLDASIIT 240
            DNRDD                LK+H+KHAER MVK+IQ+D+  D EL+ IE Y+DASII+
Sbjct: 441  DNRDDFRNKRLELASELLERELKVHLKHAERRMVKAIQKDIYGDHELRGIETYVDASIIS 500

Query: 239  NGLSRAFSTGAWSHPYKKMERVSGVVATIRRTNPLQATADMRKTRQQVSYTGRVGDARYP 60
            NGLSRAFSTGAWSHPYKKMERVSGVVAT+RRTNPLQ TADMRKTRQQVSYTGRVGDARYP
Sbjct: 501  NGLSRAFSTGAWSHPYKKMERVSGVVATLRRTNPLQMTADMRKTRQQVSYTGRVGDARYP 560

Query: 59   HPSHWGKICFLSTPDGENC 3
            HPSHWGKICFLSTPDGENC
Sbjct: 561  HPSHWGKICFLSTPDGENC 579