BLASTX nr result

ID: Rehmannia29_contig00017552 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00017552
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29767.1| hypothetical protein MIMGU_mgv1a020903mg, partial...    59   5e-07
ref|XP_012846491.1| PREDICTED: histone deacetylase 5 [Erythranth...    59   7e-07

>gb|EYU29767.1| hypothetical protein MIMGU_mgv1a020903mg, partial [Erythranthe
           guttata]
          Length = 251

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +1

Query: 1   ICAPSKGYKDIMIKALVEQAELPAQVAIAYIRDSFEKPLNGSNI-HHIPC 147
           IC PSK YKDI++KALVE+  L    A+ YIRD ++KPL GS   H+ PC
Sbjct: 199 ICGPSKAYKDIIMKALVEERNLTQNQALNYIRDCYKKPLRGSIFSHYCPC 248


>ref|XP_012846491.1| PREDICTED: histone deacetylase 5 [Erythranthe guttata]
          Length = 326

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +1

Query: 1   ICAPSKGYKDIMIKALVEQAELPAQVAIAYIRDSFEKPLNGSNI-HHIPC 147
           IC PSK YKDI++KALVE+  L    A+ YIRD ++KPL GS   H+ PC
Sbjct: 274 ICGPSKAYKDIIMKALVEERNLTQNQALNYIRDCYKKPLRGSIFSHYCPC 323


Top