BLASTX nr result

ID: Rehmannia29_contig00017418 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00017418
         (1103 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    47   6e-10
gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    44   3e-08
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    43   3e-07

>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 47.0 bits (110), Expect(2) = 6e-10
 Identities = 19/44 (43%), Positives = 30/44 (68%)
 Frame = -2

Query: 907 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLYGK 776
           K  FI KT + E+FD + P  MF FK+F+ +  +++DET L+G+
Sbjct: 82  KINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAEIDETMLFGE 125



 Score = 46.6 bits (109), Expect(2) = 6e-10
 Identities = 24/56 (42%), Positives = 36/56 (64%)
 Frame = -1

Query: 1064 LYKLQGDRIQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 897
            L+  +GDRI  S++K  + + K IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 30   LHDKEGDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 85


>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
            hygrometricum]
          Length = 161

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = -1

Query: 1052 QGDRIQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 897
            +GDRI  S++K  + + + IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 34   EGDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINF 85



 Score = 43.5 bits (101), Expect(2) = 3e-08
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = -2

Query: 907 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLY 782
           K  FI KT + E+FD + P  MF FK+F+++  ++++ET L+
Sbjct: 82  KINFITKTHVCEIFDDSFPSIMFDFKSFNDVKNAEIEETMLF 123


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 42.7 bits (99), Expect(2) = 3e-07
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = -2

Query: 907 KFCFIGKTQIFEMFDKNIPRFMFQFKNFSELATSDVDETSLY 782
           K  FI KT + E+FD + P  MF FK+F+ +  ++++ET L+
Sbjct: 162 KINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAEIEETMLF 203



 Score = 41.6 bits (96), Expect(2) = 3e-07
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = -1

Query: 1049 GDRIQGSIRKHNIQQFKKILM*GHVYAIRDFIVAPYSDKY*TCLTKHKILF 897
            GD I  SI+K  +   + IL  GH++AI++ IVA    KY T  +K+KI F
Sbjct: 115  GDHIHASIKKPVLDSVRPILKEGHLFAIKNIIVAENRMKYKTTASKYKINF 165


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