BLASTX nr result

ID: Rehmannia29_contig00017287 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00017287
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN25614.1| DNA helicase [Handroanthus impetiginosus]               96   2e-20
ref|XP_011082890.1| telomeric repeat-binding factor 1-like [Sesa...    76   2e-13

>gb|PIN25614.1| DNA helicase [Handroanthus impetiginosus]
          Length = 385

 Score = 95.5 bits (236), Expect = 2e-20
 Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   KHLEENTRAEVNGNNQSKVSEVNVNITR-GDGKRKRDSDSILDKSVHLDKEHNVSNAXXX 179
           KHLEEN RAEV GNNQ KV  VNVN    G+G+ +R+ DSILD+S+HLD++  + +A   
Sbjct: 88  KHLEENERAEVRGNNQPKVGAVNVNTAICGEGESRRNGDSILDQSIHLDEDDKIRDAEEE 147

Query: 180 XXXXXXXGASAGSKREEPSLQMPKGKKISNEEETKIQSSSALITDEVLNEKVKASRSSKQ 359
                    SAGSK ++PSL+M K +KIS  +  KIQ            E  + S S+ +
Sbjct: 148 KIREEESEISAGSKGQDPSLEMGKDQKISKADRNKIQ------------EVDEESSSACR 195

Query: 360 PQQPSVKL 383
            Q+PS++L
Sbjct: 196 DQEPSLEL 203


>ref|XP_011082890.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
 ref|XP_011082891.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
 ref|XP_011082892.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
 ref|XP_011082893.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
 ref|XP_020550641.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
 ref|XP_020550642.1| telomeric repeat-binding factor 1-like [Sesamum indicum]
          Length = 385

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
 Frame = +3

Query: 3   KHLEENTRAEVNGNNQSKVSEVNVNITRGDGKRKRDSDSILDKSVHLDKEHNVSNAXXXX 182
           +HLEE  RAE +G++ SKVS  N N+T  DGK +   ++IL+KSV LD EH  S++    
Sbjct: 88  QHLEEIKRAEADGHDLSKVSPANANVTCDDGKSRGKDETILNKSV-LDLEHQSSSSEEEK 146

Query: 183 XXXXXXGASAGSKREEPSLQMPKGKKISNEEETKIQ----SSSALITDE----VLNEKVK 338
                  AS  SK +EPSL+M + +K+ N E  KIQ     +SA  TD      ++E   
Sbjct: 147 IQEEESDASTSSKGQEPSLKMYEKEKVRNAEGKKIQEEEPETSATSTDRDPSLKMHENKN 206

Query: 339 ASRSSKQPQQPSVKLASDAYGSG 407
            +   +Q Q+   + +S     G
Sbjct: 207 CNPEEEQIQEEECETSSAPSAEG 229


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