BLASTX nr result

ID: Rehmannia29_contig00017060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00017060
         (1218 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012844810.1| PREDICTED: RNA-binding protein 25 isoform X4...    87   2e-16
ref|XP_012844809.1| PREDICTED: RNA-binding protein 25 isoform X3...    73   8e-12
ref|XP_020551510.1| LOW QUALITY PROTEIN: RNA-binding protein 25 ...    64   3e-07

>ref|XP_012844810.1| PREDICTED: RNA-binding protein 25 isoform X4 [Erythranthe guttata]
          Length = 832

 Score = 86.7 bits (213), Expect(2) = 2e-16
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +3

Query: 984  DIYLCCWHTLDNLHRFLWPLYAGVPRYPSPYAPMIRTTFPPRPLIGVMPPLA 1139
            DIY   WHTLDN+HRF  PLYAGV RYPSPYA MIR +FPPRPLIGVMP LA
Sbjct: 35   DIYFL-WHTLDNMHRFFCPLYAGVLRYPSPYASMIRPSFPPRPLIGVMPLLA 85



 Score = 28.9 bits (63), Expect(2) = 2e-16
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = +1

Query: 880 MPVLQSLIACHIFGNKS*FILLDPLCSFPAVVRFEIY 990
           MPVLQSL A               LC FPA VR +IY
Sbjct: 1   MPVLQSLFAYGFLVTTVDLFSCILLCLFPAFVRIDIY 37


>ref|XP_012844809.1| PREDICTED: RNA-binding protein 25 isoform X3 [Erythranthe guttata]
          Length = 838

 Score = 73.2 bits (178), Expect(2) = 8e-12
 Identities = 36/53 (67%), Positives = 40/53 (75%)
 Frame = +3

Query: 147 VSMTGCFLYS*LMIGYVGKSWKASLETTEYPSHFNSFLLVCTHFICLVSLISF 305
           VSMTGCFLYS LMI YVGK W+ASLE T YPSHFNSFLLV    IC   ++ +
Sbjct: 18  VSMTGCFLYSVLMIDYVGKGWRASLEATVYPSHFNSFLLV----ICSAGVLRY 66



 Score = 26.9 bits (58), Expect(2) = 8e-12
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 95  MSVTEGVRKGICVGWIR 145
           M V EG  +GIC GWIR
Sbjct: 1   MCVKEGDWEGICAGWIR 17


>ref|XP_020551510.1| LOW QUALITY PROTEIN: RNA-binding protein 25 [Sesamum indicum]
          Length = 798

 Score = 63.9 bits (154), Expect = 3e-07
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +3

Query: 1050 GVPRYPSPYAPMIRTTFPPRPLIGVMPPLA 1139
            GVPRYPSPYAPMIR  FPPRPL+GVMPPLA
Sbjct: 39   GVPRYPSPYAPMIRPAFPPRPLVGVMPPLA 68


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